RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 NR4A1P22736 598 aa9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 AKAP5P24588 427 aa9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 NDUFV1P49821 464 aa9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 C21orf59P57076 290 aa9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 DCAF6Q58WW2 860 aa9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 EGFLAMQ63HQ2 1017 aa9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 C4orf22Q6V702 233 aa9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 NLGN2Q8NFZ4 835 aa9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 SLC2A14Q8TDB8 520 aa9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 ACMSDQ8TDX5 336 aa9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 AFG1LQ8WV93 481 aa9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 EME1Q96AY2 570 aa9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 GCOM2Q9BZD3 368 aaPredicted RBP9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 PLGRKTQ9HBL7 147 aa9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 MRGBPQ9NV56 204 aa9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 SORCS3Q9UPU3 1222 aa9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 GNEQ9Y223 722 aaKnown RBP9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 CROCCQ5TZA2 2017 aa9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 FAM72CH0Y354 149 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 K7EPI3 171 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 CRTAMO95727 393 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 LTFP02788 710 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 CDH3P22223 829 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 HOXD11P31277 338 aaPredicted RBP9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 ARL4AP40617 200 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 EMP3P54852 163 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 CSE1LP55060 971 aaKnown RBP9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 STXBP5Q5T5C0 1151 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 FAM72AQ5TYM5 149 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 FAM72DQ6L9T8 149 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 PID1Q7Z2X4 250 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 FAM72BQ86X60 149 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 SPNS2Q8IVW8 549 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 TSPAN14Q8NG11 270 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 ADAM32Q8TC27 787 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 KBTBD7Q8WVZ9 684 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 MFSD3Q96ES6 412 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 CERS2Q96G23 380 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 MAML3Q96JK9 1138 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 ZNF512Q96ME7 567 aaPredicted RBP9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 APOL2Q9BQE5 337 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 CCDC28BQ9BUN5 200 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 WDR55Q9H6Y2 383 aaPredicted RBP9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 CDHR5Q9HBB8 845 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 GOLGA2P5Q9HBQ8 144 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 IGSF5Q9NSI5 407 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 UTP6Q9NYH9 597 aaKnown RBP9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 GPRC5DQ9NZD1 345 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 KLK14Q9P0G3 267 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 TXNDC16Q9P2K2 825 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 DNAJB4Q9UDY4 337 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 FZD10Q9ULW2 581 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 TMEM98Q9Y2Y6 226 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 C1orf232A0A0U1RR37 186 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 A6NL46 340 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 ADM5C9JUS6 153 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 BEST1O76090 585 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 STAU1O95793 577 aaKnown RBP9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 SMIM18P0DKX4 95 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 IGFBP6P24592 240 aaPredicted RBP9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 TKTP29401 623 aaKnown RBP9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 HOXA11P31270 313 aaPredicted RBP9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 RCVRNP35243 200 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 SERPINB5P36952 375 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 HARS2P49590 506 aaKnown RBP9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 SULT1E1P49888 294 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 ESRRGP62508 458 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 TTLL4Q14679 1199 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 ZNF484Q5JVG2 852 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 PPM1LQ5SGD2 360 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 OTUD1Q5VV17 481 aaPredicted RBP9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 SYPL2Q5VXT5 272 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 FSTL4Q6MZW2 842 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 UGT2A3Q6UWM9 527 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 ACTRT2Q8TDY3 377 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 DIS3LQ8TF46 1054 aaKnown RBP9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 COX4I2Q96KJ9 171 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 LENG8Q96PV6 779 aaPredicted RBP9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 PPP2R3BQ9Y5P8 575 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 CLDN5O00501 218 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 NEMP1O14524 444 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 CHRNGP07510 517 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 MLNP12872 115 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 COX4I1P13073 169 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 ENO3P13929 434 aaPredicted RBP9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 PSMC3P17980 439 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 ARL1P40616 181 aaPredicted RBP9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 BST2Q10589 180 aaKnown RBP9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 NME3Q13232 169 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 PDAP1Q13442 181 aaKnown RBP9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 TRIM16LQ309B1 348 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 ZNF362Q5T0B9 420 aaPredicted RBP9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 METTL21CQ5VZV1 264 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 AAGABQ6PD74 315 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 POTEHQ6S545 545 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 CTU1Q7Z7A3 348 aaKnown RBP9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 STRA8Q7Z7C7 330 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 SULF1Q8IWU6 871 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms