RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 DUSP12Q9UNI6 340 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 ING4Q9UNL4 249 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 SLC12A4Q9UP95 1085 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 ZNF510Q9Y2H8 683 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 INPP4BO15327 924 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 PMPCBO75439 489 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 SLITRK3O94933 977 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 ZNF682O95780 498 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 PRKAR1AP10644 381 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 CPA2P48052 419 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 IL5RAQ01344 420 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 HERC3Q15034 1050 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 NDUFAF6Q330K2 333 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 TCHHL1Q5QJ38 904 aaPredicted RBP4.47□□□□□ -1.69
CHD9-201ENST00000219084 RIPOR1Q6ZS17 1223 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 RNF180Q86T96 592 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 TRABD2AQ86V40 505 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 SDR16C5Q8N3Y7 309 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 LINC00116Q8NCU8 138 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 SHC3Q92529 594 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 FBXO32Q969P5 355 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 KAZALD1Q96I82 304 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 CICQ96RK0 1608 aaPredicted RBP4.47□□□□□ -1.69
CHD9-201ENST00000219084 MLPHQ9BV36 600 aaPredicted RBP4.47□□□□□ -1.69
CHD9-201ENST00000219084 FAM126AQ9BYI3 521 aaPredicted RBP4.47□□□□□ -1.69
CHD9-201ENST00000219084 YTHDF1Q9BYJ9 559 aaKnown RBP4.47□□□□□ -1.69
CHD9-201ENST00000219084 SPRTNQ9H040 489 aaPredicted RBP4.47□□□□□ -1.69
CHD9-201ENST00000219084 SENP2Q9HC62 589 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 ING3Q9NXR8 418 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 RPS6KB2Q9UBS0 482 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 SAMD4AQ9UPU9 718 aaKnown RBP4.47□□□□□ -1.69
CHD9-201ENST00000219084 TBC1D30Q9Y2I9 924 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 GNG14A0A1W2PPG7 69 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 GRAP2O75791 330 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 TM7SF2O76062 418 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 CDH3P22223 829 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 RPL9P32969 192 aaKnown RBP4.47□□□□□ -1.69
CHD9-201ENST00000219084 RARRES1P49788 294 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 ANXA8L1Q5VT79 327 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 INTS5Q6P9B9 1019 aaKnown RBP4.47□□□□□ -1.69
CHD9-201ENST00000219084 ZNF554Q86TJ5 538 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 GPSM1Q86YR5 675 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 WDR36Q8NI36 951 aaKnown RBP4.47□□□□□ -1.69
CHD9-201ENST00000219084 GRPEL2Q8TAA5 225 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 NELL1Q92832 810 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 SERAC1Q96JX3 654 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 POLR1EQ9GZS1 481 aaKnown RBP4.47□□□□□ -1.69
CHD9-201ENST00000219084 COPS7BQ9H9Q2 264 aaPredicted RBP4.47□□□□□ -1.69
CHD9-201ENST00000219084 ZFYVE28Q9HCC9 887 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 PLLPQ9Y342 182 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 UBXN8O00124 270 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 RAMP2O60895 175 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 SKAP2O75563 359 aaPredicted RBP4.47□□□□□ -1.69
CHD9-201ENST00000219084 BAIAP3O94812 1187 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 GPIP06744 558 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 ERCC2P18074 760 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 PAICSP22234 425 aaKnown RBP4.47□□□□□ -1.69
CHD9-201ENST00000219084 CASP4P49662 377 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 JAM2P57087 298 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 ITGADQ13349 1161 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 ARMC6Q6NXE6 501 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 PACRGLQ8N7B6 248 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 AGAP11Q8TF27 550 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 TDRD1Q9BXT4 1180 aaKnown RBP4.47□□□□□ -1.69
CHD9-201ENST00000219084 RHOBTB2Q9BYZ6 727 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 SMURF2Q9HAU4 748 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 PIDD1Q9HB75 910 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 RPRD1BQ9NQG5 326 aaKnown RBP4.47□□□□□ -1.69
CHD9-201ENST00000219084 ANGPT4Q9Y264 503 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 NRXN3Q9Y4C0 1643 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 CCDC162PA2VCL2 907 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 FSCN2O14926 492 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 CHST10O43529 356 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 GLRA2P23416 452 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 SLC26A3P40879 764 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 SPIDRQ14159 915 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 FSCN1Q16658 493 aaKnown RBP4.47□□□□□ -1.69
CHD9-201ENST00000219084 GJB7Q6PEY0 223 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 TMC7Q7Z402 723 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 FAM228AQ86W67 206 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 SLC25A41Q8N5S1 370 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 ZNF655Q8N720 491 aaPredicted RBP4.47□□□□□ -1.69
CHD9-201ENST00000219084 ZFP28Q8NHY6 868 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 CENPIQ92674 756 aaPredicted RBP4.47□□□□□ -1.69
CHD9-201ENST00000219084 INPP4AQ96PE3 977 aaPredicted RBP4.47□□□□□ -1.69
CHD9-201ENST00000219084 COQ7Q99807 217 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 EBNA1BP2Q99848 306 aaKnown RBP4.47□□□□□ -1.69
CHD9-201ENST00000219084 FICDQ9BVA6 458 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 C6orf62Q9GZU0 229 aaPredicted RBP4.47□□□□□ -1.69
CHD9-201ENST00000219084 MID1IP1Q9NPA3 183 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 SHROOM3Q8TF72 1996 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 ASTN1O14525 1302 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 A0A0B4J269 797 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 BCLAF3A2AJT9 711 aaKnown RBP4.47□□□□□ -1.69
CHD9-201ENST00000219084 GJB6O95452 261 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 LDOC1O95751 146 aaPredicted RBP4.47□□□□□ -1.69
CHD9-201ENST00000219084 OTCP00480 354 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 PROCP04070 461 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 ALDH7A1P49419 539 aaKnown RBP4.47□□□□□ -1.69
CHD9-201ENST00000219084 PNLIPRP1P54315 467 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms