RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 TTC27Q6P3X3 843 aa27.74■■■□□ 2.03
CHMP4B-201ENST00000217402 CHPFQ8IZ52 775 aa27.74■■■□□ 2.03
CHMP4B-201ENST00000217402 C12orf50Q8NA57 414 aaPredicted RBP27.74■■■□□ 2.03
CHMP4B-201ENST00000217402 TUBB2BQ9BVA1 445 aa27.74■■■□□ 2.03
CHMP4B-201ENST00000217402 MFSD1Q9H3U5 465 aa27.74■■■□□ 2.03
CHMP4B-201ENST00000217402 MUC22E2RYF6 1773 aaPredicted RBP27.73■■■□□ 2.03
CHMP4B-201ENST00000217402 A0A0C4DFX4 3053 aa27.73■■■□□ 2.03
CHMP4B-201ENST00000217402 BDP1A6H8Y1 2624 aa27.73■■■□□ 2.03
CHMP4B-201ENST00000217402 NEBLO76041 1014 aa27.73■■■□□ 2.03
CHMP4B-201ENST00000217402 JCHAINP01591 159 aa27.73■■■□□ 2.03
CHMP4B-201ENST00000217402 CHRM1P11229 460 aaPredicted RBP27.73■■■□□ 2.03
CHMP4B-201ENST00000217402 HLA-EP13747 358 aa27.73■■■□□ 2.03
CHMP4B-201ENST00000217402 IL12RB1P42701 662 aa27.73■■■□□ 2.03
CHMP4B-201ENST00000217402 MMP13P45452 471 aa27.73■■■□□ 2.03
CHMP4B-201ENST00000217402 ZNF235Q14590 738 aa27.73■■■□□ 2.03
CHMP4B-201ENST00000217402 CYTH1Q15438 398 aa27.73■■■□□ 2.03
CHMP4B-201ENST00000217402 DLG2Q15700 870 aa27.73■■■□□ 2.03
CHMP4B-201ENST00000217402 INO80DQ53TQ3 878 aaPredicted RBP27.73■■■□□ 2.03
CHMP4B-201ENST00000217402 DRICH1Q6PGQ1 229 aaPredicted RBP27.73■■■□□ 2.03
CHMP4B-201ENST00000217402 ALLCQ8N6M5 410 aa27.73■■■□□ 2.03
CHMP4B-201ENST00000217402 FAM71DQ8N9W8 422 aa27.73■■■□□ 2.03
CHMP4B-201ENST00000217402 FLCNQ8NFG4 579 aa27.73■■■□□ 2.03
CHMP4B-201ENST00000217402 FATE1Q969F0 183 aa27.73■■■□□ 2.03
CHMP4B-201ENST00000217402 FERMT1Q9BQL6 677 aa27.73■■■□□ 2.03
CHMP4B-201ENST00000217402 CINPQ9BW66 212 aaPredicted RBP27.73■■■□□ 2.03
CHMP4B-201ENST00000217402 DDX47Q9H0S4 455 aaKnown RBP27.73■■■□□ 2.03
CHMP4B-201ENST00000217402 LMAN1LQ9HAT1 526 aa27.73■■■□□ 2.03
CHMP4B-201ENST00000217402 TTLL3Q9Y4R7 772 aa27.73■■■□□ 2.03
CHMP4B-201ENST00000217402 NCOR1O75376 2440 aa27.73■■■□□ 2.03
CHMP4B-201ENST00000217402 WASH3PC4AMC7 463 aa27.72■■■□□ 2.03
CHMP4B-201ENST00000217402 RNF103O00237 685 aa27.72■■■□□ 2.03
CHMP4B-201ENST00000217402 HNRNPLP14866 589 aaKnown RBP eCLIP27.72■■■□□ 2.03
CHMP4B-201ENST00000217402 RENBPP51606 427 aa27.72■■■□□ 2.03
CHMP4B-201ENST00000217402 GDF10P55107 478 aa27.72■■■□□ 2.03
CHMP4B-201ENST00000217402 IFI35P80217 286 aaPredicted RBP27.72■■■□□ 2.03
CHMP4B-201ENST00000217402 C2orf54Q08AI8 447 aa27.72■■■□□ 2.03
CHMP4B-201ENST00000217402 HNRNPDQ14103 355 aaKnown RBP27.72■■■□□ 2.03
CHMP4B-201ENST00000217402 LRRC32Q14392 662 aa27.72■■■□□ 2.03
CHMP4B-201ENST00000217402 RFTN1Q14699 578 aaPredicted RBP27.72■■■□□ 2.03
CHMP4B-201ENST00000217402 C22orf39Q6P5X5 142 aa27.72■■■□□ 2.03
CHMP4B-201ENST00000217402 Q6ZS52 159 aa27.72■■■□□ 2.03
CHMP4B-201ENST00000217402 TRIM67Q6ZTA4 783 aa27.72■■■□□ 2.03
CHMP4B-201ENST00000217402 KLHL7Q8IXQ5 586 aa27.72■■■□□ 2.03
CHMP4B-201ENST00000217402 SPATA4Q8NEY3 305 aa27.72■■■□□ 2.03
CHMP4B-201ENST00000217402 RPLP0P6Q8NHW5 317 aa27.72■■■□□ 2.03
CHMP4B-201ENST00000217402 CASKIN2Q8WXE0 1202 aa27.72■■■□□ 2.03
CHMP4B-201ENST00000217402 TNKS2Q9H2K2 1166 aa27.72■■■□□ 2.03
CHMP4B-201ENST00000217402 MTG2Q9H4K7 406 aa27.72■■■□□ 2.03
CHMP4B-201ENST00000217402 USP29Q9HBJ7 922 aa27.72■■■□□ 2.03
CHMP4B-201ENST00000217402 RBM22Q9NW64 420 aaKnown RBP eCLIP27.72■■■□□ 2.03
CHMP4B-201ENST00000217402 SEPT3Q9UH03 358 aa27.72■■■□□ 2.03
CHMP4B-201ENST00000217402 CXorf51AA0A1B0GTR3 108 aa27.71■■■□□ 2.03
CHMP4B-201ENST00000217402 SGK1O00141 431 aa27.71■■■□□ 2.03
CHMP4B-201ENST00000217402 MTSS1O43312 755 aa27.71■■■□□ 2.03
CHMP4B-201ENST00000217402 ATP9BO43861 1147 aa27.71■■■□□ 2.03
CHMP4B-201ENST00000217402 BNIP3LO60238 219 aa27.71■■■□□ 2.03
CHMP4B-201ENST00000217402 PDGFBP01127 241 aaPredicted RBP27.71■■■□□ 2.03
CHMP4B-201ENST00000217402 ITGAVP06756 1048 aa27.71■■■□□ 2.03
CHMP4B-201ENST00000217402 PRKCHP24723 683 aa27.71■■■□□ 2.03
CHMP4B-201ENST00000217402 PTPN3P26045 913 aa27.71■■■□□ 2.03
CHMP4B-201ENST00000217402 RHOAP61586 193 aa27.71■■■□□ 2.03
CHMP4B-201ENST00000217402 WASHC5Q12768 1159 aa27.71■■■□□ 2.03
CHMP4B-201ENST00000217402 KCTD19Q17RG1 926 aaPredicted RBP27.71■■■□□ 2.03
CHMP4B-201ENST00000217402 DGKKQ5KSL6 1271 aa27.71■■■□□ 2.03
CHMP4B-201ENST00000217402 CCDC137Q6PK04 289 aaKnown RBP27.71■■■□□ 2.03
CHMP4B-201ENST00000217402 IL17RCQ8NAC3 791 aa27.71■■■□□ 2.03
CHMP4B-201ENST00000217402 TSEN2Q8NCE0 465 aaKnown RBP27.71■■■□□ 2.03
CHMP4B-201ENST00000217402 ERLEC1Q96DZ1 483 aa27.71■■■□□ 2.03
CHMP4B-201ENST00000217402 EXOC2Q96KP1 924 aa27.71■■■□□ 2.03
CHMP4B-201ENST00000217402 NELL2Q99435 816 aa27.71■■■□□ 2.03
CHMP4B-201ENST00000217402 TM6SF2Q9BZW4 377 aa27.71■■■□□ 2.03
CHMP4B-201ENST00000217402 NT5MQ9NPB1 228 aa27.71■■■□□ 2.03
CHMP4B-201ENST00000217402 SLC8A2Q9UPR5 921 aa27.71■■■□□ 2.03
CHMP4B-201ENST00000217402 STON1Q9Y6Q2 735 aa27.71■■■□□ 2.03
CHMP4B-201ENST00000217402 TTC28Q96AY4 2481 aa27.71■■■□□ 2.03
CHMP4B-201ENST00000217402 KLF8O95600 359 aaPredicted RBP27.7■■■□□ 2.03
CHMP4B-201ENST00000217402 ALADP13716 330 aa27.7■■■□□ 2.03
CHMP4B-201ENST00000217402 COILP38432 576 aaPredicted RBP27.7■■■□□ 2.03
CHMP4B-201ENST00000217402 Q6ZVU0 165 aa27.7■■■□□ 2.03
CHMP4B-201ENST00000217402 BBS5Q8N3I7 341 aa27.7■■■□□ 2.03
CHMP4B-201ENST00000217402 PJA1Q8NG27 643 aa27.7■■■□□ 2.03
CHMP4B-201ENST00000217402 AGAP3Q96P47 875 aa27.7■■■□□ 2.03
CHMP4B-201ENST00000217402 TMEM245Q9H330 911 aa27.7■■■□□ 2.03
CHMP4B-201ENST00000217402 LHX3Q9UBR4 397 aa27.7■■■□□ 2.03
CHMP4B-201ENST00000217402 MUC3AQ02505 3323 aa27.7■■■□□ 2.03
CHMP4B-201ENST00000217402 CFAP69A5D8W1 941 aa27.7■■■□□ 2.02
CHMP4B-201ENST00000217402 CCDC188H7C350 402 aa27.7■■■□□ 2.02
CHMP4B-201ENST00000217402 HLA-DQB2P05538 268 aa27.7■■■□□ 2.02
CHMP4B-201ENST00000217402 CHRNA3P32297 505 aa27.7■■■□□ 2.02
CHMP4B-201ENST00000217402 MRPS21P82921 87 aaKnown RBP27.7■■■□□ 2.02
CHMP4B-201ENST00000217402 E2F5Q15329 346 aa27.7■■■□□ 2.02
CHMP4B-201ENST00000217402 GSTA5Q7RTV2 222 aa27.7■■■□□ 2.02
CHMP4B-201ENST00000217402 METTL3Q86U44 580 aaKnown RBP27.7■■■□□ 2.02
CHMP4B-201ENST00000217402 CCDC105Q8IYK2 499 aa27.7■■■□□ 2.02
CHMP4B-201ENST00000217402 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP27.7■■■□□ 2.02
CHMP4B-201ENST00000217402 TEX26Q8N6G2 289 aa27.7■■■□□ 2.02
CHMP4B-201ENST00000217402 KDM1BQ8NB78 822 aa27.7■■■□□ 2.02
CHMP4B-201ENST00000217402 TXNDC5Q8NBS9 432 aaKnown RBP27.7■■■□□ 2.02
CHMP4B-201ENST00000217402 CCDC26Q8TAB7 109 aa27.7■■■□□ 2.02
CHMP4B-201ENST00000217402 KCNV2Q8TDN2 545 aa27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms