RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 PLD1Q13393 1074 aa17.51■□□□□ 0.39
RABGGTA-201ENST00000216840 SERINC3Q13530 473 aa17.51■□□□□ 0.39
RABGGTA-201ENST00000216840 PCID2Q5JVF3 399 aa17.51■□□□□ 0.39
RABGGTA-201ENST00000216840 TEDDM1Q5T9Z0 273 aa17.51■□□□□ 0.39
RABGGTA-201ENST00000216840 GRTP1Q5TC63 336 aa17.51■□□□□ 0.39
RABGGTA-201ENST00000216840 RFWD3Q6PCD5 774 aa17.51■□□□□ 0.39
RABGGTA-201ENST00000216840 KDELC1Q6UW63 502 aa17.51■□□□□ 0.39
RABGGTA-201ENST00000216840 ZNF354CQ86Y25 554 aa17.51■□□□□ 0.39
RABGGTA-201ENST00000216840 CFAP52Q8N1V2 620 aa17.51■□□□□ 0.39
RABGGTA-201ENST00000216840 PABPC5Q96DU9 382 aaKnown RBP17.51■□□□□ 0.39
RABGGTA-201ENST00000216840 IMP4Q96G21 291 aaKnown RBP17.51■□□□□ 0.39
RABGGTA-201ENST00000216840 MANSC1Q9H8J5 431 aa17.51■□□□□ 0.39
RABGGTA-201ENST00000216840 ARL2BPQ9Y2Y0 163 aa17.51■□□□□ 0.39
RABGGTA-201ENST00000216840 KIAA0100Q14667 2235 aaKnown RBP17.51■□□□□ 0.39
RABGGTA-201ENST00000216840 RAG1P15918 1043 aa17.51■□□□□ 0.39
RABGGTA-201ENST00000216840 ACVRL1P37023 503 aa17.51■□□□□ 0.39
RABGGTA-201ENST00000216840 SERPINB4P48594 390 aa17.51■□□□□ 0.39
RABGGTA-201ENST00000216840 HARS2P49590 506 aaKnown RBP17.51■□□□□ 0.39
RABGGTA-201ENST00000216840 IL10RBQ08334 325 aa17.51■□□□□ 0.39
RABGGTA-201ENST00000216840 HSP90AA5PQ58FG0 334 aa17.51■□□□□ 0.39
RABGGTA-201ENST00000216840 PKN3Q6P5Z2 889 aa17.51■□□□□ 0.39
RABGGTA-201ENST00000216840 RANBP10Q6VN20 620 aa17.51■□□□□ 0.39
RABGGTA-201ENST00000216840 KCNMB4Q86W47 210 aa17.51■□□□□ 0.39
RABGGTA-201ENST00000216840 CCDC117Q8IWD4 279 aaPredicted RBP17.51■□□□□ 0.39
RABGGTA-201ENST00000216840 ACMSDQ8TDX5 336 aa17.51■□□□□ 0.39
RABGGTA-201ENST00000216840 PTPRN2Q92932 1015 aa17.51■□□□□ 0.39
RABGGTA-201ENST00000216840 PLD4Q96BZ4 506 aa17.51■□□□□ 0.39
RABGGTA-201ENST00000216840 ZNF778Q96MU6 729 aa17.51■□□□□ 0.39
RABGGTA-201ENST00000216840 AGAP2Q99490 1192 aa17.51■□□□□ 0.39
RABGGTA-201ENST00000216840 FSD1LQ9BXM9 530 aa17.51■□□□□ 0.39
RABGGTA-201ENST00000216840 KDM4CQ9H3R0 1056 aa17.51■□□□□ 0.39
RABGGTA-201ENST00000216840 C20orf96Q9NUD7 363 aaPredicted RBP17.51■□□□□ 0.39
RABGGTA-201ENST00000216840 TXNDC16Q9P2K2 825 aa17.51■□□□□ 0.39
RABGGTA-201ENST00000216840 TPP1O14773 563 aa17.5■□□□□ 0.39
RABGGTA-201ENST00000216840 SLC11A2P49281 568 aa17.5■□□□□ 0.39
RABGGTA-201ENST00000216840 WNT3AP56704 352 aa17.5■□□□□ 0.39
RABGGTA-201ENST00000216840 MAXP61244 160 aa17.5■□□□□ 0.39
RABGGTA-201ENST00000216840 TWF1Q12792 350 aa17.5■□□□□ 0.39
RABGGTA-201ENST00000216840 TAF12Q16514 161 aa17.5■□□□□ 0.39
RABGGTA-201ENST00000216840 SPRED3Q2MJR0 410 aa17.5■□□□□ 0.39
RABGGTA-201ENST00000216840 OTOAQ7RTW8 1153 aa17.5■□□□□ 0.39
RABGGTA-201ENST00000216840 CCDC63Q8NA47 563 aa17.5■□□□□ 0.39
RABGGTA-201ENST00000216840 RBBP8Q99708 897 aa17.5■□□□□ 0.39
RABGGTA-201ENST00000216840 RNF38Q9H0F5 515 aa17.5■□□□□ 0.39
RABGGTA-201ENST00000216840 PLXNA4Q9HCM2 1894 aa17.5■□□□□ 0.39
RABGGTA-201ENST00000216840 PRRG1O14668 218 aa17.49■□□□□ 0.39
RABGGTA-201ENST00000216840 STC2O76061 302 aa17.49■□□□□ 0.39
RABGGTA-201ENST00000216840 KLKB1P03952 638 aa17.49■□□□□ 0.39
RABGGTA-201ENST00000216840 POU6F1Q14863 301 aa17.49■□□□□ 0.39
RABGGTA-201ENST00000216840 VEPH1Q14D04 833 aa17.49■□□□□ 0.39
RABGGTA-201ENST00000216840 LACTB2Q53H82 288 aaPredicted RBP17.49■□□□□ 0.39
RABGGTA-201ENST00000216840 TRPM8Q7Z2W7 1104 aa17.49■□□□□ 0.39
RABGGTA-201ENST00000216840 STRA8Q7Z7C7 330 aa17.49■□□□□ 0.39
RABGGTA-201ENST00000216840 DENND1CQ8IV53 801 aa17.49■□□□□ 0.39
RABGGTA-201ENST00000216840 TCEAL8Q8IYN2 117 aa17.49■□□□□ 0.39
RABGGTA-201ENST00000216840 CNPY4Q8N129 248 aa17.49■□□□□ 0.39
RABGGTA-201ENST00000216840 TMEM199Q8N511 208 aa17.49■□□□□ 0.39
RABGGTA-201ENST00000216840 NSMCE1Q8WV22 266 aa17.49■□□□□ 0.39
RABGGTA-201ENST00000216840 AZIN2Q96A70 460 aa17.49■□□□□ 0.39
RABGGTA-201ENST00000216840 YME1L1Q96TA2 773 aa17.49■□□□□ 0.39
RABGGTA-201ENST00000216840 GKN1Q9NS71 199 aa17.49■□□□□ 0.39
RABGGTA-201ENST00000216840 ZFP37Q9Y6Q3 630 aaPredicted RBP17.49■□□□□ 0.39
RABGGTA-201ENST00000216840 OBSL1O75147 1896 aa17.49■□□□□ 0.39
RABGGTA-201ENST00000216840 CCDC78A2IDD5 438 aa17.49■□□□□ 0.39
RABGGTA-201ENST00000216840 CARNS1A5YM72 827 aa17.49■□□□□ 0.39
RABGGTA-201ENST00000216840 C2orf78A6NCI8 922 aa17.49■□□□□ 0.39
RABGGTA-201ENST00000216840 PRAMEF11O60813 436 aa17.49■□□□□ 0.39
RABGGTA-201ENST00000216840 MMP2P08253 660 aa17.49■□□□□ 0.39
RABGGTA-201ENST00000216840 CD86P42081 329 aa17.49■□□□□ 0.39
RABGGTA-201ENST00000216840 DSC2Q02487 901 aa17.49■□□□□ 0.39
RABGGTA-201ENST00000216840 ITKQ08881 620 aa17.49■□□□□ 0.39
RABGGTA-201ENST00000216840 IHHQ14623 411 aa17.49■□□□□ 0.39
RABGGTA-201ENST00000216840 POTEHQ6S545 545 aa17.49■□□□□ 0.39
RABGGTA-201ENST00000216840 KDELC2Q7Z4H8 507 aa17.49■□□□□ 0.39
RABGGTA-201ENST00000216840 DNAJB7Q7Z6W7 309 aaPredicted RBP17.49■□□□□ 0.39
RABGGTA-201ENST00000216840 PGBD5Q8N414 524 aa17.49■□□□□ 0.39
RABGGTA-201ENST00000216840 ARMC2Q8NEN0 867 aa17.49■□□□□ 0.39
RABGGTA-201ENST00000216840 PLCD4Q9BRC7 762 aa17.49■□□□□ 0.39
RABGGTA-201ENST00000216840 KLF16Q9BXK1 252 aaPredicted RBP17.49■□□□□ 0.39
RABGGTA-201ENST00000216840 ATXN3LQ9H3M9 355 aa17.49■□□□□ 0.39
RABGGTA-201ENST00000216840 IARS2Q9NSE4 1012 aaKnown RBP17.49■□□□□ 0.39
RABGGTA-201ENST00000216840 ABCF3Q9NUQ8 709 aa17.49■□□□□ 0.39
RABGGTA-201ENST00000216840 H3BNC9 293 aa17.48■□□□□ 0.39
RABGGTA-201ENST00000216840 BAIAP3O94812 1187 aa17.48■□□□□ 0.39
RABGGTA-201ENST00000216840 TOP3BO95985 862 aaKnown RBP17.48■□□□□ 0.39
RABGGTA-201ENST00000216840 F7P08709 466 aaPredicted RBP17.48■□□□□ 0.39
RABGGTA-201ENST00000216840 BGNP21810 368 aa17.48■□□□□ 0.39
RABGGTA-201ENST00000216840 CORO1AP31146 461 aaKnown RBP17.48■□□□□ 0.39
RABGGTA-201ENST00000216840 ELF1P32519 619 aa17.48■□□□□ 0.39
RABGGTA-201ENST00000216840 SPRP35270 261 aaPredicted RBP17.48■□□□□ 0.39
RABGGTA-201ENST00000216840 CHRNA4P43681 627 aa17.48■□□□□ 0.39
RABGGTA-201ENST00000216840 LIMK2P53671 638 aa17.48■□□□□ 0.39
RABGGTA-201ENST00000216840 PDE1BQ01064 536 aa17.48■□□□□ 0.39
RABGGTA-201ENST00000216840 PDE1CQ14123 709 aaPredicted RBP17.48■□□□□ 0.39
RABGGTA-201ENST00000216840 LBRQ14739 615 aaKnown RBP17.48■□□□□ 0.39
RABGGTA-201ENST00000216840 PCSK7Q16549 785 aa17.48■□□□□ 0.39
RABGGTA-201ENST00000216840 PDPK2PQ6A1A2 396 aa17.48■□□□□ 0.39
RABGGTA-201ENST00000216840 TMEM150AQ86TG1 271 aa17.48■□□□□ 0.39
RABGGTA-201ENST00000216840 PPHLN1Q8NEY8 458 aaKnown RBP17.48■□□□□ 0.39
RABGGTA-201ENST00000216840 PTCD2Q8WV60 388 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms