RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 F9P00740 461 aa13.52□□□□□ -0.24
SRP54-201ENST00000216774 SBK3P0C264 359 aa13.52□□□□□ -0.24
SRP54-201ENST00000216774 LRPAP1P30533 357 aa13.52□□□□□ -0.24
SRP54-201ENST00000216774 MAP3K7CLP57077 242 aa13.52□□□□□ -0.24
SRP54-201ENST00000216774 ZNF33AQ06730 810 aa13.52□□□□□ -0.24
SRP54-201ENST00000216774 SNAPC2Q13487 334 aa13.52□□□□□ -0.24
SRP54-201ENST00000216774 UGP2Q16851 508 aa13.52□□□□□ -0.24
SRP54-201ENST00000216774 ZNF423Q2M1K9 1284 aa13.52□□□□□ -0.24
SRP54-201ENST00000216774 RARS2Q5T160 578 aaKnown RBP13.52□□□□□ -0.24
SRP54-201ENST00000216774 PGAM4Q8N0Y7 254 aa13.52□□□□□ -0.24
SRP54-201ENST00000216774 MARVELD2Q8N4S9 558 aa13.52□□□□□ -0.24
SRP54-201ENST00000216774 DPF3Q92784 378 aa13.52□□□□□ -0.24
SRP54-201ENST00000216774 CDCA5Q96FF9 252 aa13.52□□□□□ -0.24
SRP54-201ENST00000216774 ULBP1Q9BZM6 244 aa13.52□□□□□ -0.24
SRP54-201ENST00000216774 RNF39Q9H2S5 420 aa13.52□□□□□ -0.24
SRP54-201ENST00000216774 VCX3AQ9NNX9 186 aa13.52□□□□□ -0.24
SRP54-201ENST00000216774 RGS17Q9UGC6 210 aaPredicted RBP13.52□□□□□ -0.24
SRP54-201ENST00000216774 CDYLQ9Y232 598 aa13.52□□□□□ -0.24
SRP54-201ENST00000216774 YJEFN3A6XGL0 299 aa13.52□□□□□ -0.25
SRP54-201ENST00000216774 TARM1B6A8C7 271 aa13.52□□□□□ -0.25
SRP54-201ENST00000216774 F7P08709 466 aaPredicted RBP13.52□□□□□ -0.25
SRP54-201ENST00000216774 SLC35E2BP0CK96 405 aa13.52□□□□□ -0.25
SRP54-201ENST00000216774 SMIM10L2AP0DMW4 78 aa13.52□□□□□ -0.25
SRP54-201ENST00000216774 SMIM10L2BP0DMW5 78 aa13.52□□□□□ -0.25
SRP54-201ENST00000216774 NMBRP28336 390 aa13.52□□□□□ -0.25
SRP54-201ENST00000216774 EPHA3P29320 983 aa13.52□□□□□ -0.25
SRP54-201ENST00000216774 ITGA7Q13683 1181 aa13.52□□□□□ -0.25
SRP54-201ENST00000216774 FLOT2Q14254 428 aa13.52□□□□□ -0.25
SRP54-201ENST00000216774 USP10Q14694 798 aaKnown RBP13.52□□□□□ -0.25
SRP54-201ENST00000216774 RFTN1Q14699 578 aaPredicted RBP13.52□□□□□ -0.25
SRP54-201ENST00000216774 UBXN11Q5T124 520 aa13.52□□□□□ -0.25
SRP54-201ENST00000216774 TMC7Q7Z402 723 aa13.52□□□□□ -0.25
SRP54-201ENST00000216774 CNTN4Q8IWV2 1026 aa13.52□□□□□ -0.25
SRP54-201ENST00000216774 ADAM32Q8TC27 787 aa13.52□□□□□ -0.25
SRP54-201ENST00000216774 PDCD6IPQ8WUM4 868 aaKnown RBP13.52□□□□□ -0.25
SRP54-201ENST00000216774 DLG3Q92796 817 aa13.52□□□□□ -0.25
SRP54-201ENST00000216774 DDIT4Q9NX09 232 aa13.52□□□□□ -0.25
SRP54-201ENST00000216774 C15orf38-AP3S2A0A0A6YYH1 394 aa13.51□□□□□ -0.25
SRP54-201ENST00000216774 CAPN8A6NHC0 703 aa13.51□□□□□ -0.25
SRP54-201ENST00000216774 NEMP1O14524 444 aa13.51□□□□□ -0.25
SRP54-201ENST00000216774 CACNG3O60359 315 aa13.51□□□□□ -0.25
SRP54-201ENST00000216774 DDNO94850 711 aaPredicted RBP13.51□□□□□ -0.25
SRP54-201ENST00000216774 RTN3O95197 1032 aaPredicted RBP13.51□□□□□ -0.25
SRP54-201ENST00000216774 NCAM1P13591 858 aa13.51□□□□□ -0.25
SRP54-201ENST00000216774 THOP1P52888 689 aa13.51□□□□□ -0.25
SRP54-201ENST00000216774 NAGLUP54802 743 aa13.51□□□□□ -0.25
SRP54-201ENST00000216774 NSUN2Q08J23 767 aaKnown RBP eCLIP13.51□□□□□ -0.25
SRP54-201ENST00000216774 SNX17Q15036 470 aa13.51□□□□□ -0.25
SRP54-201ENST00000216774 RAB41Q5JT25 222 aa13.51□□□□□ -0.25
SRP54-201ENST00000216774 PPM1LQ5SGD2 360 aa13.51□□□□□ -0.25
SRP54-201ENST00000216774 WSCD1Q658N2 575 aa13.51□□□□□ -0.25
SRP54-201ENST00000216774 IQSEC1Q6DN90 963 aa13.51□□□□□ -0.25
SRP54-201ENST00000216774 FBXL19Q6PCT2 694 aa13.51□□□□□ -0.25
SRP54-201ENST00000216774 ARPINQ7Z6K5 226 aa13.51□□□□□ -0.25
SRP54-201ENST00000216774 ZSCAN18Q8TBC5 510 aaPredicted RBP13.51□□□□□ -0.25
SRP54-201ENST00000216774 DCUN1D1Q96GG9 259 aa13.51□□□□□ -0.25
SRP54-201ENST00000216774 CDRT15Q96T59 188 aa13.51□□□□□ -0.25
SRP54-201ENST00000216774 APBA2Q99767 749 aa13.51□□□□□ -0.25
SRP54-201ENST00000216774 APOL2Q9BQE5 337 aa13.51□□□□□ -0.25
SRP54-201ENST00000216774 COLEC11Q9BWP8 271 aa13.51□□□□□ -0.25
SRP54-201ENST00000216774 ZBTB26Q9HCK0 441 aa13.51□□□□□ -0.25
SRP54-201ENST00000216774 RAB26Q9ULW5 256 aa13.51□□□□□ -0.25
SRP54-201ENST00000216774 TXNDC9O14530 226 aa13.51□□□□□ -0.25
SRP54-201ENST00000216774 AMHP03971 560 aa13.51□□□□□ -0.25
SRP54-201ENST00000216774 SRGAP2BP0DMP2 458 aa13.51□□□□□ -0.25
SRP54-201ENST00000216774 TPH1P17752 444 aa13.51□□□□□ -0.25
SRP54-201ENST00000216774 COG7P83436 770 aa13.51□□□□□ -0.25
SRP54-201ENST00000216774 ADGRE1Q14246 886 aa13.51□□□□□ -0.25
SRP54-201ENST00000216774 CNTD1Q8N815 330 aa13.51□□□□□ -0.25
SRP54-201ENST00000216774 RCN3Q96D15 328 aa13.51□□□□□ -0.25
SRP54-201ENST00000216774 SCYL1Q96KG9 808 aa13.51□□□□□ -0.25
SRP54-201ENST00000216774 LRGUKQ96M69 825 aa13.51□□□□□ -0.25
SRP54-201ENST00000216774 TSGA13Q96PP4 275 aa13.51□□□□□ -0.25
SRP54-201ENST00000216774 GCNAQ96QF7 691 aa13.51□□□□□ -0.25
SRP54-201ENST00000216774 NUF2Q9BZD4 464 aa13.51□□□□□ -0.25
SRP54-201ENST00000216774 ABHD16BQ9H3Z7 469 aa13.51□□□□□ -0.25
SRP54-201ENST00000216774 EFCAB1Q9HAE3 211 aa13.51□□□□□ -0.25
SRP54-201ENST00000216774 OR12D3Q9UGF7 316 aa13.51□□□□□ -0.25
SRP54-201ENST00000216774 ZDHHC2Q9UIJ5 367 aa13.51□□□□□ -0.25
SRP54-201ENST00000216774 RUVBL2Q9Y230 463 aaKnown RBP13.51□□□□□ -0.25
SRP54-201ENST00000216774 ACOT9Q9Y305 439 aa13.51□□□□□ -0.25
SRP54-201ENST00000216774 AAR2Q9Y312 384 aaKnown RBP13.51□□□□□ -0.25
SRP54-201ENST00000216774 IPPQ9Y573 584 aa13.51□□□□□ -0.25
SRP54-201ENST00000216774 F2P00734 622 aa13.5□□□□□ -0.25
SRP54-201ENST00000216774 JCHAINP01591 159 aa13.5□□□□□ -0.25
SRP54-201ENST00000216774 YBX3P16989 372 aaKnown RBP eCLIP13.5□□□□□ -0.25
SRP54-201ENST00000216774 GRIA2P42262 883 aa13.5□□□□□ -0.25
SRP54-201ENST00000216774 CXCR3P49682 368 aa13.5□□□□□ -0.25
SRP54-201ENST00000216774 TLR1Q15399 786 aa13.5□□□□□ -0.25
SRP54-201ENST00000216774 CNGA3Q16281 694 aa13.5□□□□□ -0.25
SRP54-201ENST00000216774 PCID2Q5JVF3 399 aa13.5□□□□□ -0.25
SRP54-201ENST00000216774 KIAA0319Q5VV43 1072 aa13.5□□□□□ -0.25
SRP54-201ENST00000216774 LRRC8EQ6NSJ5 796 aa13.5□□□□□ -0.25
SRP54-201ENST00000216774 PKN3Q6P5Z2 889 aa13.5□□□□□ -0.25
SRP54-201ENST00000216774 CENPLQ8N0S6 344 aaPredicted RBP13.5□□□□□ -0.25
SRP54-201ENST00000216774 LSMEM2Q8N112 164 aa13.5□□□□□ -0.25
SRP54-201ENST00000216774 FSTL5Q8N475 847 aaPredicted RBP13.5□□□□□ -0.25
SRP54-201ENST00000216774 ADCY4Q8NFM4 1077 aa13.5□□□□□ -0.25
SRP54-201ENST00000216774 NAT14Q8WUY8 206 aa13.5□□□□□ -0.25
SRP54-201ENST00000216774 TMEM40Q8WWA1 233 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms