RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 DDIT4Q9NX09 232 aa11.7□□□□□ -0.54
DNMT3B-201ENST00000201963 JAK1P23458 1154 aa11.7□□□□□ -0.54
DNMT3B-201ENST00000201963 SPIDRQ14159 915 aa11.7□□□□□ -0.54
DNMT3B-201ENST00000201963 SFT2D3Q587I9 215 aa11.7□□□□□ -0.54
DNMT3B-201ENST00000201963 PPM1JQ5JR12 505 aa11.7□□□□□ -0.54
DNMT3B-201ENST00000201963 FBXO46Q6PJ61 603 aaPredicted RBP11.7□□□□□ -0.54
DNMT3B-201ENST00000201963 SEPT8Q92599 483 aa11.7□□□□□ -0.54
DNMT3B-201ENST00000201963 RMDN1Q96DB5 314 aa11.7□□□□□ -0.54
DNMT3B-201ENST00000201963 CCDC126Q96EE4 140 aa11.7□□□□□ -0.54
DNMT3B-201ENST00000201963 CERS2Q96G23 380 aa11.7□□□□□ -0.54
DNMT3B-201ENST00000201963 MIPEPQ99797 713 aa11.7□□□□□ -0.54
DNMT3B-201ENST00000201963 RTKNQ9BST9 563 aa11.7□□□□□ -0.54
DNMT3B-201ENST00000201963 EGFL7Q9UHF1 273 aa11.7□□□□□ -0.54
DNMT3B-201ENST00000201963 NDST1P52848 882 aa11.7□□□□□ -0.54
DNMT3B-201ENST00000201963 GAD2Q05329 585 aa11.7□□□□□ -0.54
DNMT3B-201ENST00000201963 ZC3H12AQ5D1E8 599 aaKnown RBP11.7□□□□□ -0.54
DNMT3B-201ENST00000201963 KLHDC10Q6PID8 442 aa11.7□□□□□ -0.54
DNMT3B-201ENST00000201963 PACS1Q6VY07 963 aa11.7□□□□□ -0.54
DNMT3B-201ENST00000201963 MON1BQ7L1V2 547 aa11.7□□□□□ -0.54
DNMT3B-201ENST00000201963 OR52K1Q8NGK4 314 aa11.7□□□□□ -0.54
DNMT3B-201ENST00000201963 OR9Q1Q8NGQ5 310 aa11.7□□□□□ -0.54
DNMT3B-201ENST00000201963 TBCBQ99426 244 aa11.7□□□□□ -0.54
DNMT3B-201ENST00000201963 KCTD14Q9BQ13 255 aaPredicted RBP11.7□□□□□ -0.54
DNMT3B-201ENST00000201963 SPON2Q9BUD6 331 aa11.7□□□□□ -0.54
DNMT3B-201ENST00000201963 RAB26Q9ULW5 256 aa11.7□□□□□ -0.54
DNMT3B-201ENST00000201963 NDUFAF1Q9Y375 327 aa11.7□□□□□ -0.54
DNMT3B-201ENST00000201963 LRP5O75197 1615 aa11.7□□□□□ -0.54
DNMT3B-201ENST00000201963 PSMD3O43242 534 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 ASNA1O43681 348 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 CD48P09326 243 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 SNHG28P0DPA3 235 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 NCAM1P13591 858 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 GNAZP19086 355 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 CCNA2P20248 432 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 CRHR1P34998 444 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 PRKD1Q15139 912 aaPredicted RBP11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 SGO1Q5FBB7 561 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 BRSK2Q8IWQ3 736 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 CLEC4DQ8WXI8 215 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 SCLYQ96I15 445 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 CPB2Q96IY4 423 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 SH3GL1Q99961 368 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 LIN28AQ9H9Z2 209 aaKnown RBP11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 TRMT13Q9NUP7 481 aaKnown RBP11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 BAZ2AQ9UIF9 1905 aaKnown RBP11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 SBF2Q86WG5 1849 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 RNASEH1O60930 286 aaKnown RBP11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 ACAT1P24752 427 aaKnown RBP11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 MPSTP25325 297 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 PSMB4P28070 264 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 HOXD13P35453 343 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 RAD23AP54725 363 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 RALGDSQ12967 914 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 LDLRAP1Q5SW96 308 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 PARVBQ9HBI1 364 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 SNX15Q9NRS6 342 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 PCDHB7Q9Y5E2 793 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 PRRC2BQ5JSZ5 2229 aaKnown RBP11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 TTLL13PA6NNM8 815 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 H3BSA7 217 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 DUSP11O75319 330 aaKnown RBP11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 LRCH4O75427 683 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 CRTAMO95727 393 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 TRUB2O95900 331 aaKnown RBP11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 ASLP04424 464 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 NUMBP49757 651 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 CSE1LP55060 971 aaKnown RBP11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 YWHAZP63104 245 aaKnown RBP11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 PTP4A2Q12974 167 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 LINC00523Q86TU6 105 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 C12orf56Q8IXR9 622 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 RORBQ92753 470 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 MAGED4Q96JG8 741 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 COX4I2Q96KJ9 171 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 CDH19Q9H159 772 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 RAD21L1Q9H4I0 556 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 CAB39LQ9H9S4 337 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 ATP8B3O60423 1300 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 LSM1O15116 133 aaKnown RBP11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 ZBTB11O95625 1053 aaPredicted RBP11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 SLC7A2P52569 658 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 PRMT2P55345 433 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 POLD3Q15054 466 aaPredicted RBP11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 TRMT10BQ6PF06 316 aaKnown RBP11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 ABRAXAS1Q6UWZ7 409 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 C17orf99Q6UX52 265 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 TREML1Q86YW5 311 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 HERC6Q8IVU3 1022 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 OSCP1Q8WVF1 389 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 SNRNP25Q9BV90 132 aaKnown RBP11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 ROGDIQ9GZN7 287 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 C6orf62Q9GZU0 229 aaPredicted RBP11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 ATXN3LQ9H3M9 355 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 CAB39Q9Y376 341 aaPredicted RBP11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 RAP2CQ9Y3L5 183 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 PCDHA11Q9Y5I1 949 aa11.69□□□□□ -0.54
DNMT3B-201ENST00000201963 GOLGA4Q13439 2230 aaKnown RBP11.68□□□□□ -0.54
DNMT3B-201ENST00000201963 SNED1Q8TER0 1413 aa11.68□□□□□ -0.54
DNMT3B-201ENST00000201963 NCF1BA6NI72 391 aaPredicted RBP11.68□□□□□ -0.54
DNMT3B-201ENST00000201963 UNCXA6NJT0 531 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms