RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 NEBLO76041 1014 aa20.02■□□□□ 0.8
TNFRSF1A-201ENST00000162749 CREB1P16220 341 aa20.02■□□□□ 0.8
TNFRSF1A-201ENST00000162749 ATP5DP30049 168 aa20.02■□□□□ 0.8
TNFRSF1A-201ENST00000162749 GNA12Q03113 381 aa20.02■□□□□ 0.8
TNFRSF1A-201ENST00000162749 TMED2Q15363 201 aa20.02■□□□□ 0.8
TNFRSF1A-201ENST00000162749 PRPF39Q86UA1 669 aaKnown RBP20.02■□□□□ 0.8
TNFRSF1A-201ENST00000162749 TEX26Q8N6G2 289 aa20.02■□□□□ 0.8
TNFRSF1A-201ENST00000162749 TTC16Q8NEE8 873 aa20.02■□□□□ 0.8
TNFRSF1A-201ENST00000162749 APOL2Q9BQE5 337 aa20.02■□□□□ 0.8
TNFRSF1A-201ENST00000162749 DHRS4Q9BTZ2 278 aa20.02■□□□□ 0.8
TNFRSF1A-201ENST00000162749 SLC46A2Q9BY10 475 aa20.02■□□□□ 0.8
TNFRSF1A-201ENST00000162749 YBX2Q9Y2T7 364 aaKnown RBP20.02■□□□□ 0.8
TNFRSF1A-201ENST00000162749 ANKRD36A6QL64 1941 aa20.02■□□□□ 0.8
TNFRSF1A-201ENST00000162749 TRAV19A0A0A6YYK7 116 aa20.02■□□□□ 0.79
TNFRSF1A-201ENST00000162749 PER2O15055 1255 aa20.02■□□□□ 0.79
TNFRSF1A-201ENST00000162749 PRAMEF11O60813 436 aa20.02■□□□□ 0.79
TNFRSF1A-201ENST00000162749 ANXA9O76027 345 aa20.02■□□□□ 0.79
TNFRSF1A-201ENST00000162749 C1RP00736 705 aa20.02■□□□□ 0.79
TNFRSF1A-201ENST00000162749 HOXD9P28356 352 aaPredicted RBP20.02■□□□□ 0.79
TNFRSF1A-201ENST00000162749 STX2P32856 288 aa20.02■□□□□ 0.79
TNFRSF1A-201ENST00000162749 ERVK-21P61565 698 aa20.02■□□□□ 0.79
TNFRSF1A-201ENST00000162749 TTC39BQ5VTQ0 682 aaPredicted RBP20.02■□□□□ 0.79
TNFRSF1A-201ENST00000162749 NAPEPLDQ6IQ20 393 aa20.02■□□□□ 0.79
TNFRSF1A-201ENST00000162749 DNAAF3Q8N9W5 541 aa20.02■□□□□ 0.79
TNFRSF1A-201ENST00000162749 OR7D4Q8NG98 312 aa20.02■□□□□ 0.79
TNFRSF1A-201ENST00000162749 GSDMBQ8TAX9 411 aa20.02■□□□□ 0.79
TNFRSF1A-201ENST00000162749 SHKBP1Q8TBC3 707 aa20.02■□□□□ 0.79
TNFRSF1A-201ENST00000162749 CHMP6Q96FZ7 201 aa20.02■□□□□ 0.79
TNFRSF1A-201ENST00000162749 SAMD11Q96NU1 681 aa20.02■□□□□ 0.79
TNFRSF1A-201ENST00000162749 PDFQ9HBH1 243 aa20.02■□□□□ 0.79
TNFRSF1A-201ENST00000162749 NT5MQ9NPB1 228 aa20.02■□□□□ 0.79
TNFRSF1A-201ENST00000162749 PSMC3IPQ9P2W1 217 aaPredicted RBP20.02■□□□□ 0.79
TNFRSF1A-201ENST00000162749 PCDHA11Q9Y5I1 949 aa20.02■□□□□ 0.79
TNFRSF1A-201ENST00000162749 GFRA2O00451 464 aa20.01■□□□□ 0.79
TNFRSF1A-201ENST00000162749 GSTA2P09210 222 aa20.01■□□□□ 0.79
TNFRSF1A-201ENST00000162749 HOXA9P31269 272 aa20.01■□□□□ 0.79
TNFRSF1A-201ENST00000162749 PBX2P40425 430 aa20.01■□□□□ 0.79
TNFRSF1A-201ENST00000162749 GPM6BQ13491 265 aa20.01■□□□□ 0.79
TNFRSF1A-201ENST00000162749 TAOK1Q7L7X3 1001 aa20.01■□□□□ 0.79
TNFRSF1A-201ENST00000162749 TCEAL4Q96EI5 215 aa20.01■□□□□ 0.79
TNFRSF1A-201ENST00000162749 INTS9Q9NV88 658 aaKnown RBP20.01■□□□□ 0.79
TNFRSF1A-201ENST00000162749 DNMT3BQ9UBC3 853 aaKnown RBP20.01■□□□□ 0.79
TNFRSF1A-201ENST00000162749 TBC1D30Q9Y2I9 924 aa20.01■□□□□ 0.79
TNFRSF1A-201ENST00000162749 PRKCHP24723 683 aa20■□□□□ 0.79
TNFRSF1A-201ENST00000162749 MAXP61244 160 aa20■□□□□ 0.79
TNFRSF1A-201ENST00000162749 TNK2Q07912 1038 aa20■□□□□ 0.79
TNFRSF1A-201ENST00000162749 TRMT10BQ6PF06 316 aaKnown RBP20■□□□□ 0.79
TNFRSF1A-201ENST00000162749 ADGRD1Q6QNK2 874 aa20■□□□□ 0.79
TNFRSF1A-201ENST00000162749 MICALCLQ6ZW33 695 aa20■□□□□ 0.79
TNFRSF1A-201ENST00000162749 YTHDF3Q7Z739 585 aaKnown RBP20■□□□□ 0.79
TNFRSF1A-201ENST00000162749 SETD3Q86TU7 594 aaPredicted RBP20■□□□□ 0.79
TNFRSF1A-201ENST00000162749 FAM217AQ8IXS0 508 aa20■□□□□ 0.79
TNFRSF1A-201ENST00000162749 NSMCE1Q8WV22 266 aa20■□□□□ 0.79
TNFRSF1A-201ENST00000162749 SEC16BQ96JE7 1060 aa20■□□□□ 0.79
TNFRSF1A-201ENST00000162749 SLC25A51Q9H1U9 297 aa20■□□□□ 0.79
TNFRSF1A-201ENST00000162749 LSM7Q9UK45 103 aaKnown RBP20■□□□□ 0.79
TNFRSF1A-201ENST00000162749 HCFC2Q9Y5Z7 792 aa20■□□□□ 0.79
TNFRSF1A-201ENST00000162749 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20■□□□□ 0.79
TNFRSF1A-201ENST00000162749 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20■□□□□ 0.79
TNFRSF1A-201ENST00000162749 ILVBLA1L0T0 632 aa20■□□□□ 0.79
TNFRSF1A-201ENST00000162749 PTPN2P17706 415 aa20■□□□□ 0.79
TNFRSF1A-201ENST00000162749 PFKLP17858 780 aa20■□□□□ 0.79
TNFRSF1A-201ENST00000162749 IFT88Q13099 833 aa20■□□□□ 0.79
TNFRSF1A-201ENST00000162749 ZNF177Q13360 481 aaPredicted RBP20■□□□□ 0.79
TNFRSF1A-201ENST00000162749 STEAP4Q687X5 459 aa20■□□□□ 0.79
TNFRSF1A-201ENST00000162749 CXorf57Q6NSI4 855 aaKnown RBP20■□□□□ 0.79
TNFRSF1A-201ENST00000162749 HTR3DQ70Z44 454 aa20■□□□□ 0.79
TNFRSF1A-201ENST00000162749 LINC00523Q86TU6 105 aa20■□□□□ 0.79
TNFRSF1A-201ENST00000162749 IPMKQ8NFU5 416 aa20■□□□□ 0.79
TNFRSF1A-201ENST00000162749 PPP1R2P1Q96PQ5 205 aa20■□□□□ 0.79
TNFRSF1A-201ENST00000162749 NAT9Q9BTE0 207 aa20■□□□□ 0.79
TNFRSF1A-201ENST00000162749 CERS4Q9HA82 394 aa20■□□□□ 0.79
TNFRSF1A-201ENST00000162749 CFAP97Q9P2B7 532 aa20■□□□□ 0.79
TNFRSF1A-201ENST00000162749 XIRP2A4UGR9 3374 aa20■□□□□ 0.79
TNFRSF1A-201ENST00000162749 C2orf16Q68DN1 1984 aa19.99■□□□□ 0.79
TNFRSF1A-201ENST00000162749 PSMD3O43242 534 aa19.99■□□□□ 0.79
TNFRSF1A-201ENST00000162749 MOSPD3O75425 235 aa19.99■□□□□ 0.79
TNFRSF1A-201ENST00000162749 RHOP08100 348 aa19.99■□□□□ 0.79
TNFRSF1A-201ENST00000162749 RHOCP08134 193 aa19.99■□□□□ 0.79
TNFRSF1A-201ENST00000162749 PGAM1P18669 254 aa19.99■□□□□ 0.79
TNFRSF1A-201ENST00000162749 LIG3P49916 1009 aa19.99■□□□□ 0.79
TNFRSF1A-201ENST00000162749 CDH17Q12864 832 aa19.99■□□□□ 0.79
TNFRSF1A-201ENST00000162749 LBRQ14739 615 aaKnown RBP19.99■□□□□ 0.79
TNFRSF1A-201ENST00000162749 SLC5A9Q2M3M2 681 aa19.99■□□□□ 0.79
TNFRSF1A-201ENST00000162749 TMCO4Q5TGY1 634 aa19.99■□□□□ 0.79
TNFRSF1A-201ENST00000162749 IL31Q6EBC2 164 aa19.99■□□□□ 0.79
TNFRSF1A-201ENST00000162749 PDE12Q6L8Q7 609 aaKnown RBP19.99■□□□□ 0.79
TNFRSF1A-201ENST00000162749 RBM23Q86U06 439 aaKnown RBP19.99■□□□□ 0.79
TNFRSF1A-201ENST00000162749 CCNJLQ8IV13 435 aa19.99■□□□□ 0.79
TNFRSF1A-201ENST00000162749 DCAKDQ8WVC6 231 aa19.99■□□□□ 0.79
TNFRSF1A-201ENST00000162749 IMP4Q96G21 291 aaKnown RBP19.99■□□□□ 0.79
TNFRSF1A-201ENST00000162749 SMG9Q9H0W8 520 aaKnown RBP19.99■□□□□ 0.79
TNFRSF1A-201ENST00000162749 CCDC134Q9H6E4 229 aa19.99■□□□□ 0.79
TNFRSF1A-201ENST00000162749 BFARQ9NZS9 450 aa19.99■□□□□ 0.79
TNFRSF1A-201ENST00000162749 ETFBP38117 255 aa19.99■□□□□ 0.79
TNFRSF1A-201ENST00000162749 MSH2P43246 934 aa19.99■□□□□ 0.79
TNFRSF1A-201ENST00000162749 GEMP55040 296 aa19.99■□□□□ 0.79
TNFRSF1A-201ENST00000162749 CERCAMQ5T4B2 595 aa19.99■□□□□ 0.79
TNFRSF1A-201ENST00000162749 CPLX4Q7Z7G2 160 aa19.99■□□□□ 0.79
TNFRSF1A-201ENST00000162749 SRRM1Q8IYB3 904 aaKnown RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms