RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 SUFUQ9UMX1 484 aa12.25□□□□□ -0.45
CHPF2-201ENST00000035307 PCDHGC3Q9UN70 934 aa12.25□□□□□ -0.45
CHPF2-201ENST00000035307 FAM50BQ9Y247 325 aa12.25□□□□□ -0.45
CHPF2-201ENST00000035307 PRR5-ARHGAP8B1AHC4 643 aa12.25□□□□□ -0.45
CHPF2-201ENST00000035307 USP1O94782 785 aa12.25□□□□□ -0.45
CHPF2-201ENST00000035307 KLHL2O95198 593 aa12.25□□□□□ -0.45
CHPF2-201ENST00000035307 PIGNO95427 931 aa12.25□□□□□ -0.45
CHPF2-201ENST00000035307 SERPINB8P50452 374 aa12.25□□□□□ -0.45
CHPF2-201ENST00000035307 ARHGAP8P85298 464 aa12.25□□□□□ -0.45
CHPF2-201ENST00000035307 CDK16Q00536 496 aa12.25□□□□□ -0.45
CHPF2-201ENST00000035307 MED21Q13503 144 aa12.25□□□□□ -0.45
CHPF2-201ENST00000035307 CAPRIN1Q14444 709 aaKnown RBP12.25□□□□□ -0.45
CHPF2-201ENST00000035307 CBX2Q14781 532 aaPredicted RBP12.25□□□□□ -0.45
CHPF2-201ENST00000035307 IMPG1Q17R60 797 aa12.25□□□□□ -0.45
CHPF2-201ENST00000035307 RNF219Q5W0B1 726 aaPredicted RBP12.25□□□□□ -0.45
CHPF2-201ENST00000035307 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.25□□□□□ -0.45
CHPF2-201ENST00000035307 PCDH20Q8N6Y1 951 aaKnown RBP12.25□□□□□ -0.45
CHPF2-201ENST00000035307 PXYLP1Q8TE99 480 aa12.25□□□□□ -0.45
CHPF2-201ENST00000035307 MRPS31Q92665 395 aaKnown RBP12.25□□□□□ -0.45
CHPF2-201ENST00000035307 SMG9Q9H0W8 520 aaKnown RBP12.25□□□□□ -0.45
CHPF2-201ENST00000035307 WDR55Q9H6Y2 383 aaPredicted RBP12.25□□□□□ -0.45
CHPF2-201ENST00000035307 CCSER2Q9H7U1 834 aa12.25□□□□□ -0.45
CHPF2-201ENST00000035307 CHRAC1Q9NRG0 131 aa12.25□□□□□ -0.45
CHPF2-201ENST00000035307 AK5Q9Y6K8 562 aa12.25□□□□□ -0.45
CHPF2-201ENST00000035307 SIPA1L1O43166 1804 aa12.25□□□□□ -0.45
CHPF2-201ENST00000035307 PIRO00625 290 aa12.25□□□□□ -0.45
CHPF2-201ENST00000035307 CCL16O15467 120 aa12.25□□□□□ -0.45
CHPF2-201ENST00000035307 DNAJC8O75937 253 aaPredicted RBP12.25□□□□□ -0.45
CHPF2-201ENST00000035307 LRIG2O94898 1065 aa12.25□□□□□ -0.45
CHPF2-201ENST00000035307 HNRNPLP14866 589 aaKnown RBP eCLIP12.25□□□□□ -0.45
CHPF2-201ENST00000035307 PAX7P23759 505 aa12.25□□□□□ -0.45
CHPF2-201ENST00000035307 VHLP40337 213 aa12.25□□□□□ -0.45
CHPF2-201ENST00000035307 MAP7Q14244 749 aa12.25□□□□□ -0.45
CHPF2-201ENST00000035307 LBRQ14739 615 aaKnown RBP12.25□□□□□ -0.45
CHPF2-201ENST00000035307 USP41Q3LFD5 358 aa12.25□□□□□ -0.45
CHPF2-201ENST00000035307 GALNTL6Q49A17 601 aa12.25□□□□□ -0.45
CHPF2-201ENST00000035307 SEL1L3Q68CR1 1132 aa12.25□□□□□ -0.45
CHPF2-201ENST00000035307 SCIMPQ6UWF3 145 aa12.25□□□□□ -0.45
CHPF2-201ENST00000035307 SNX32Q86XE0 403 aa12.25□□□□□ -0.45
CHPF2-201ENST00000035307 KCTD4Q8WVF5 259 aa12.25□□□□□ -0.45
CHPF2-201ENST00000035307 CNBD2Q96M20 576 aa12.25□□□□□ -0.45
CHPF2-201ENST00000035307 BTBD10Q9BSF8 475 aa12.25□□□□□ -0.45
CHPF2-201ENST00000035307 MRPL1Q9BYD6 325 aaKnown RBP12.25□□□□□ -0.45
CHPF2-201ENST00000035307 C15orf41Q9Y2V0 281 aa12.25□□□□□ -0.45
CHPF2-201ENST00000035307 FER1L6Q2WGJ9 1857 aa12.24□□□□□ -0.45
CHPF2-201ENST00000035307 CXorf49A8MYA2 514 aaPredicted RBP12.24□□□□□ -0.45
CHPF2-201ENST00000035307 ANGPT2O15123 496 aa12.24□□□□□ -0.45
CHPF2-201ENST00000035307 E2F6O75461 281 aa12.24□□□□□ -0.45
CHPF2-201ENST00000035307 FBXO21O94952 628 aa12.24□□□□□ -0.45
CHPF2-201ENST00000035307 SMAD3P84022 425 aaKnown RBP12.24□□□□□ -0.45
CHPF2-201ENST00000035307 AGKQ53H12 422 aa12.24□□□□□ -0.45
CHPF2-201ENST00000035307 C10orf107Q8IVU9 208 aa12.24□□□□□ -0.45
CHPF2-201ENST00000035307 SUGP1Q8IWZ8 645 aaKnown RBP12.24□□□□□ -0.45
CHPF2-201ENST00000035307 SLC35F5Q8WV83 523 aa12.24□□□□□ -0.45
CHPF2-201ENST00000035307 NKD2Q969F2 451 aaPredicted RBP12.24□□□□□ -0.45
CHPF2-201ENST00000035307 SDCCAG3Q96C92 435 aa12.24□□□□□ -0.45
CHPF2-201ENST00000035307 CERS2Q96G23 380 aa12.24□□□□□ -0.45
CHPF2-201ENST00000035307 FTHL17Q9BXU8 183 aa12.24□□□□□ -0.45
CHPF2-201ENST00000035307 CCDC90BQ9GZT6 254 aa12.24□□□□□ -0.45
CHPF2-201ENST00000035307 TCF7L2Q9NQB0 619 aa12.24□□□□□ -0.45
CHPF2-201ENST00000035307 OLA1Q9NTK5 396 aaKnown RBP12.24□□□□□ -0.45
CHPF2-201ENST00000035307 CD274Q9NZQ7 290 aa12.24□□□□□ -0.45
CHPF2-201ENST00000035307 DCDC2Q9UHG0 476 aa12.24□□□□□ -0.45
CHPF2-201ENST00000035307 STK25O00506 426 aa12.24□□□□□ -0.45
CHPF2-201ENST00000035307 HOXA2O43364 376 aa12.24□□□□□ -0.45
CHPF2-201ENST00000035307 SH3BGRLO75368 114 aa12.24□□□□□ -0.45
CHPF2-201ENST00000035307 MT-CYBP00156 380 aaPredicted RBP12.24□□□□□ -0.45
CHPF2-201ENST00000035307 GABRR2P28476 465 aa12.24□□□□□ -0.45
CHPF2-201ENST00000035307 DAOAP59103 153 aa12.24□□□□□ -0.45
CHPF2-201ENST00000035307 ZNF252P-AS1Q0IIN9 211 aa12.24□□□□□ -0.45
CHPF2-201ENST00000035307 DPY19L2P1Q6NXN4 242 aa12.24□□□□□ -0.45
CHPF2-201ENST00000035307 PNPLA1Q8N8W4 532 aa12.24□□□□□ -0.45
CHPF2-201ENST00000035307 HNRNPABQ99729 332 aaKnown RBP12.24□□□□□ -0.45
CHPF2-201ENST00000035307 NFKBIZQ9BYH8 718 aa12.24□□□□□ -0.45
CHPF2-201ENST00000035307 FRMD8Q9BZ67 464 aaPredicted RBP12.24□□□□□ -0.45
CHPF2-201ENST00000035307 GPR63Q9BZJ6 419 aa12.24□□□□□ -0.45
CHPF2-201ENST00000035307 ABCG8Q9H221 673 aa12.24□□□□□ -0.45
CHPF2-201ENST00000035307 MRPL17Q9NRX2 175 aaKnown RBP12.24□□□□□ -0.45
CHPF2-201ENST00000035307 ARHGAP26Q9UNA1 814 aa12.24□□□□□ -0.45
CHPF2-201ENST00000035307 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.24□□□□□ -0.45
CHPF2-201ENST00000035307 C9JVG2 144 aa12.24□□□□□ -0.45
CHPF2-201ENST00000035307 FAM72CH0Y354 149 aa12.24□□□□□ -0.45
CHPF2-201ENST00000035307 ANXA9O76027 345 aa12.24□□□□□ -0.45
CHPF2-201ENST00000035307 F9P00740 461 aa12.24□□□□□ -0.45
CHPF2-201ENST00000035307 ITGA2BP08514 1039 aa12.24□□□□□ -0.45
CHPF2-201ENST00000035307 PSEN1P49768 467 aa12.24□□□□□ -0.45
CHPF2-201ENST00000035307 TBL3Q12788 808 aaKnown RBP12.24□□□□□ -0.45
CHPF2-201ENST00000035307 ZNF177Q13360 481 aaPredicted RBP12.24□□□□□ -0.45
CHPF2-201ENST00000035307 SLC25A52Q3SY17 297 aa12.24□□□□□ -0.45
CHPF2-201ENST00000035307 ANKRD20A4Q4UJ75 823 aa12.24□□□□□ -0.45
CHPF2-201ENST00000035307 FAM72AQ5TYM5 149 aa12.24□□□□□ -0.45
CHPF2-201ENST00000035307 MARC1Q5VT66 337 aa12.24□□□□□ -0.45
CHPF2-201ENST00000035307 FAM72DQ6L9T8 149 aa12.24□□□□□ -0.45
CHPF2-201ENST00000035307 MFSD5Q6N075 450 aa12.24□□□□□ -0.45
CHPF2-201ENST00000035307 FAM72BQ86X60 149 aa12.24□□□□□ -0.45
CHPF2-201ENST00000035307 FBXO22Q8NEZ5 403 aa12.24□□□□□ -0.45
CHPF2-201ENST00000035307 DCLRE1BQ9H816 532 aa12.24□□□□□ -0.45
CHPF2-201ENST00000035307 TAGLN3Q9UI15 199 aa12.24□□□□□ -0.45
CHPF2-201ENST00000035307 RABGEF1Q9UJ41 708 aa12.24□□□□□ -0.45
CHPF2-201ENST00000035307 FAF1Q9UNN5 650 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms