RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Ror1Q9Z139 937 aa26.21■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Vmn2r111K7N674 857 aa26.21■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Ly6dP35459 127 aa26.21■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Tlx1P43345 332 aa26.21■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Myl2P51667 166 aa26.21■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Myadml2Q08AU7 307 aa26.21■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Arnt2Q61324 712 aa26.21■■□□□ 1.79
Tpm1-216ENSMUST00000113707 TCAIMQ66JZ4 499 aa26.21■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Deup1Q7M6Y5 601 aa26.21■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Rpp38Q80UU2 280 aa26.21■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Tusc3Q8BTV1 347 aa26.21■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Pacs1Q8K212 961 aa26.21■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Ddx18Q8K363 660 aaKnown RBP26.21■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Brd8Q8R3B7 951 aa26.21■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Mrps22Q9CXW2 359 aa26.21■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Cndp2Q9D1A2 475 aaKnown RBP26.21■■□□□ 1.79
Tpm1-216ENSMUST00000113707 4930449I24RikQ9D5E3 319 aa26.21■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Oma1Q9D8H7 521 aa26.21■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Dpysl5Q9EQF6 564 aa26.21■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Trpc4Q9QUQ5 974 aa26.21■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Tmem115Q9WUH1 350 aa26.21■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Fpr-rs3O88537 343 aa26.2■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Lmf1Q3U3R4 574 aa26.2■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Mfsd3Q5U419 412 aa26.2■■□□□ 1.78
Tpm1-216ENSMUST00000113707 MregQ6NVG5 214 aa26.2■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Ip6k1Q6PD10 433 aa26.2■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Olfr299Q7TS05 330 aa26.2■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Usp1Q8BJQ2 784 aa26.2■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Acad10Q8K370 1069 aa26.2■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Lrrc8cQ8R502 803 aa26.2■■□□□ 1.78
Tpm1-216ENSMUST00000113707 DutQ8VCG1 200 aaKnown RBP26.2■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Zkscan3Q91VW9 553 aa26.2■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Dnajc3Q91YW3 504 aa26.2■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Gpatch1Q9DBM1 930 aa26.2■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Il1rl2Q9ERS7 574 aa26.2■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Vsig10l2A0A140LHF2 776 aa26.19■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Akap5D3YVF0 745 aa26.19■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Usp2O88623 613 aa26.19■■□□□ 1.78
Tpm1-216ENSMUST00000113707 PdgfrbP05622 1098 aa26.19■■□□□ 1.78
Tpm1-216ENSMUST00000113707 FsbpQ8BKE5 299 aa26.19■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Ythdf3Q8BYK6 585 aaKnown RBP26.19■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Snx30Q8CE50 437 aa26.19■■□□□ 1.78
Tpm1-216ENSMUST00000113707 RhoqQ8R527 205 aa26.19■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Wrnip1Q91XU0 660 aa26.19■■□□□ 1.78
Tpm1-216ENSMUST00000113707 GghQ9Z0L8 317 aa26.19■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Zfp780bE9Q2S6 806 aa26.19■■□□□ 1.78
Tpm1-216ENSMUST00000113707 LdhcP00342 332 aa26.19■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Bmpr1aP36895 532 aa26.19■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Zfp607aQ3TQG9 686 aa26.19■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Spag6Q3V0U9 509 aa26.19■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Fbxw10Q5SUS0 1030 aa26.19■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Dnajc15Q78YY6 149 aa26.19■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Fut11Q8BHC9 489 aa26.19■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Gtse1Q8R080 741 aa26.19■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Vps37cQ8R105 352 aa26.19■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Rps6kl1Q8R2S1 544 aa26.19■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Olfr1353Q8VGU8 309 aa26.19■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Pcdhgb1Q91XX8 918 aa26.19■■□□□ 1.78
Tpm1-216ENSMUST00000113707 AadacQ99PG0 398 aa26.19■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Pramef17A2ASJ1 475 aa26.18■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Dthd1E9PZX1 795 aa26.18■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Gm5689F6Y2A6 97 aa26.18■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Dnase1l3O55070 310 aa26.18■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Gnat1P20612 350 aa26.18■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Sar1aP36536 198 aa26.18■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Gdf5P43027 495 aa26.18■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Ppp3ccP48455 513 aa26.18■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Neurog1P70660 244 aa26.18■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Slc22a16Q497L8 649 aa26.18■■□□□ 1.78
Tpm1-216ENSMUST00000113707 PapolaQ61183 739 aa26.18■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Slc39a4Q78IQ7 660 aa26.18■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Trpm4Q7TN37 1213 aa26.18■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Cgrrf1Q8BMJ7 332 aa26.18■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Psapl1Q8C1C1 522 aa26.18■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Agbl3Q8CDP0 1006 aa26.18■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Pkn3Q8K045 878 aa26.18■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Alg14Q9D081 217 aa26.18■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Nup62clA2AG10 272 aa26.17■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Smok3aC0HKC8 504 aa26.17■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Smok3bC0HKC9 504 aa26.17■■□□□ 1.78
Tpm1-216ENSMUST00000113707 PrnpP04925 254 aa26.17■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Folr1P35846 255 aa26.17■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Yap1P46938 488 aa26.17■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Adamts8P57110 905 aa26.17■■□□□ 1.78
Tpm1-216ENSMUST00000113707 IqcmQ149I8 489 aa26.17■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Arl13bQ640N2 427 aa26.17■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Trnau1apQ80VC6 287 aaKnown RBP26.17■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Zmpste24Q80W54 475 aa26.17■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Tbc1d17Q8BYH7 645 aa26.17■■□□□ 1.78
Tpm1-216ENSMUST00000113707 CenpuQ8C4M7 410 aa26.17■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Rpa1Q8VEE4 623 aaKnown RBP26.17■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Oas1dQ8VI95 361 aa26.17■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Prl5a1Q9JII2 230 aa26.17■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Pik3cdO35904 1043 aa26.17■■□□□ 1.78
Tpm1-216ENSMUST00000113707 MaptP10637 733 aa26.17■■□□□ 1.78
Tpm1-216ENSMUST00000113707 CenpcP49452 906 aaKnown RBP26.17■■□□□ 1.78
Tpm1-216ENSMUST00000113707 S100bP50114 92 aa26.17■■□□□ 1.78
Tpm1-216ENSMUST00000113707 CcncQ62447 283 aa26.17■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Lingo3Q6GQU6 589 aa26.17■■□□□ 1.78
Tpm1-216ENSMUST00000113707 Fstl5Q8BFR2 847 aa26.17■■□□□ 1.78
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms