RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Scube1Q6NZL8 1018 aa18.61■□□□□ 0.57
Trim47-202ENSMUST00000106441 Olfr1057Q7TR75 315 aa18.61■□□□□ 0.57
Trim47-202ENSMUST00000106441 Clec4b1Q7TS58 209 aa18.61■□□□□ 0.57
Trim47-202ENSMUST00000106441 Npas4Q8BGD7 802 aa18.61■□□□□ 0.57
Trim47-202ENSMUST00000106441 Pcmtd2Q8BHD8 359 aa18.61■□□□□ 0.57
Trim47-202ENSMUST00000106441 PigwQ8C398 503 aa18.61■□□□□ 0.57
Trim47-202ENSMUST00000106441 Dhrs7bQ99J47 323 aa18.61■□□□□ 0.57
Trim47-202ENSMUST00000106441 Cacng4Q9JJV4 327 aa18.61■□□□□ 0.57
Trim47-202ENSMUST00000106441 Sf3b1Q99NB9 1304 aaKnown RBP18.6■□□□□ 0.57
Trim47-202ENSMUST00000106441 4930469K13RikA0A286YDB2 92 aa18.6■□□□□ 0.57
Trim47-202ENSMUST00000106441 Gm7694J3QNH8 270 aa18.6■□□□□ 0.57
Trim47-202ENSMUST00000106441 Fcer2P20693 331 aa18.6■□□□□ 0.57
Trim47-202ENSMUST00000106441 Gjb3P28231 270 aa18.6■□□□□ 0.57
Trim47-202ENSMUST00000106441 Ccna2P51943 422 aaKnown RBP18.6■□□□□ 0.57
Trim47-202ENSMUST00000106441 Kir3dl1P83555 432 aa18.6■□□□□ 0.57
Trim47-202ENSMUST00000106441 AcdQ5EE38 416 aa18.6■□□□□ 0.57
Trim47-202ENSMUST00000106441 PigaQ64323 485 aa18.6■□□□□ 0.57
Trim47-202ENSMUST00000106441 Scube3Q66PY1 993 aa18.6■□□□□ 0.57
Trim47-202ENSMUST00000106441 Mis18bp1Q80WQ8 998 aa18.6■□□□□ 0.57
Trim47-202ENSMUST00000106441 Metap1Q8BP48 386 aaKnown RBP18.6■□□□□ 0.57
Trim47-202ENSMUST00000106441 Wwp1Q8BZZ3 918 aa18.6■□□□□ 0.57
Trim47-202ENSMUST00000106441 Fam114a2Q8VE88 497 aa18.6■□□□□ 0.57
Trim47-202ENSMUST00000106441 Rnh1Q91VI7 456 aa18.6■□□□□ 0.57
Trim47-202ENSMUST00000106441 Snx15Q91WE1 337 aa18.6■□□□□ 0.57
Trim47-202ENSMUST00000106441 Wbp11Q923D5 641 aaKnown RBP18.6■□□□□ 0.57
Trim47-202ENSMUST00000106441 PmpcbQ9CXT8 489 aa18.6■□□□□ 0.57
Trim47-202ENSMUST00000106441 Tdp2Q9JJX7 370 aa18.6■□□□□ 0.57
Trim47-202ENSMUST00000106441 Slc23a1Q9Z2J0 605 aa18.6■□□□□ 0.57
Trim47-202ENSMUST00000106441 1700001O22RikA2APZ1 375 aa18.59■□□□□ 0.57
Trim47-202ENSMUST00000106441 Fibcd1A2AV25 459 aa18.59■□□□□ 0.57
Trim47-202ENSMUST00000106441 Serpinb3cA2RSF9 386 aa18.59■□□□□ 0.57
Trim47-202ENSMUST00000106441 Gm4302E9PX25 294 aa18.59■□□□□ 0.57
Trim47-202ENSMUST00000106441 Ifi206G3UZV2 921 aa18.59■□□□□ 0.57
Trim47-202ENSMUST00000106441 Mysm1Q69Z66 819 aa18.59■□□□□ 0.57
Trim47-202ENSMUST00000106441 Arl5cQ6P068 179 aa18.59■□□□□ 0.57
Trim47-202ENSMUST00000106441 Sec24bQ80ZX0 1251 aa18.59■□□□□ 0.57
Trim47-202ENSMUST00000106441 Pdk1Q8BFP9 434 aaKnown RBP18.59■□□□□ 0.57
Trim47-202ENSMUST00000106441 Kank2Q8BX02 843 aa18.59■□□□□ 0.57
Trim47-202ENSMUST00000106441 Nlrp4bQ8C6J9 863 aa18.59■□□□□ 0.57
Trim47-202ENSMUST00000106441 Castor2Q8CAB8 329 aa18.59■□□□□ 0.57
Trim47-202ENSMUST00000106441 Ephb1Q8CBF3 984 aa18.59■□□□□ 0.57
Trim47-202ENSMUST00000106441 Slco4a1Q8K078 723 aa18.59■□□□□ 0.57
Trim47-202ENSMUST00000106441 Ace2Q8R0I0 805 aa18.59■□□□□ 0.57
Trim47-202ENSMUST00000106441 Mul1Q8VCM5 352 aa18.59■□□□□ 0.57
Trim47-202ENSMUST00000106441 Akr1c14Q91WT7 323 aa18.59■□□□□ 0.57
Trim47-202ENSMUST00000106441 B3galt6Q91Z92 325 aa18.59■□□□□ 0.57
Trim47-202ENSMUST00000106441 Trim7Q923T7 510 aa18.59■□□□□ 0.57
Trim47-202ENSMUST00000106441 Sdcbp2Q99JZ0 292 aa18.59■□□□□ 0.57
Trim47-202ENSMUST00000106441 Pex6Q99LC9 981 aa18.59■□□□□ 0.57
Trim47-202ENSMUST00000106441 GsdmcQ99NB5 468 aa18.59■□□□□ 0.57
Trim47-202ENSMUST00000106441 LactbQ9EP89 551 aa18.59■□□□□ 0.57
Trim47-202ENSMUST00000106441 Rbck1Q9WUB0 508 aa18.59■□□□□ 0.57
Trim47-202ENSMUST00000106441 Gm5538W4VSP6 401 aa18.59■□□□□ 0.57
Trim47-202ENSMUST00000106441 Vmn2r72D3Z4N8 856 aa18.59■□□□□ 0.57
Trim47-202ENSMUST00000106441 EsrraO08580 422 aa18.59■□□□□ 0.57
Trim47-202ENSMUST00000106441 Bcl7cO08664 217 aa18.59■□□□□ 0.57
Trim47-202ENSMUST00000106441 Fen1P39749 378 aa18.59■□□□□ 0.57
Trim47-202ENSMUST00000106441 Sycp3P70281 254 aa18.59■□□□□ 0.57
Trim47-202ENSMUST00000106441 Dact3Q0PHV7 610 aa18.59■□□□□ 0.57
Trim47-202ENSMUST00000106441 Mettl17Q3U2U7 461 aa18.59■□□□□ 0.57
Trim47-202ENSMUST00000106441 Itih1Q61702 907 aa18.59■□□□□ 0.57
Trim47-202ENSMUST00000106441 Arhgef33Q8BW86 850 aa18.59■□□□□ 0.57
Trim47-202ENSMUST00000106441 Fam136aQ9CR98 138 aa18.59■□□□□ 0.57
Trim47-202ENSMUST00000106441 Arl2Q9D0J4 184 aa18.59■□□□□ 0.57
Trim47-202ENSMUST00000106441 Mkrn2osD3Z393 217 aa18.58■□□□□ 0.57
Trim47-202ENSMUST00000106441 Gm8444F6XS56 118 aa18.58■□□□□ 0.57
Trim47-202ENSMUST00000106441 Gm5689F6Y2A6 97 aa18.58■□□□□ 0.57
Trim47-202ENSMUST00000106441 C1qbpO35658 278 aa18.58■□□□□ 0.57
Trim47-202ENSMUST00000106441 Itgb3O54890 787 aa18.58■□□□□ 0.57
Trim47-202ENSMUST00000106441 AvilO88398 819 aa18.58■□□□□ 0.57
Trim47-202ENSMUST00000106441 Dync1i2O88487 612 aaKnown RBP18.58■□□□□ 0.57
Trim47-202ENSMUST00000106441 Wnt3aP27467 352 aa18.58■□□□□ 0.57
Trim47-202ENSMUST00000106441 Wdr5P61965 334 aa18.58■□□□□ 0.57
Trim47-202ENSMUST00000106441 Psmb4P99026 264 aa18.58■□□□□ 0.57
Trim47-202ENSMUST00000106441 Eml1Q05BC3 814 aa18.58■□□□□ 0.57
Trim47-202ENSMUST00000106441 Papd5Q68ED3 633 aaKnown RBP18.58■□□□□ 0.57
Trim47-202ENSMUST00000106441 Armc12Q80X86 340 aa18.58■□□□□ 0.57
Trim47-202ENSMUST00000106441 Ston2Q8BZ60 895 aa18.58■□□□□ 0.57
Trim47-202ENSMUST00000106441 ItchQ8C863 864 aa18.58■□□□□ 0.57
Trim47-202ENSMUST00000106441 Smoc2Q8CD91 447 aa18.58■□□□□ 0.57
Trim47-202ENSMUST00000106441 CherpQ8CGZ0 936 aaKnown RBP18.58■□□□□ 0.57
Trim47-202ENSMUST00000106441 Mrps18aQ99N85 196 aa18.58■□□□□ 0.57
Trim47-202ENSMUST00000106441 TcimQ9D915 106 aa18.58■□□□□ 0.57
Trim47-202ENSMUST00000106441 H2afyQ9QZQ8 372 aaKnown RBP18.58■□□□□ 0.57
Trim47-202ENSMUST00000106441 PignQ9R1S3 931 aa18.58■□□□□ 0.57
Trim47-202ENSMUST00000106441 LipaQ9Z0M5 397 aa18.58■□□□□ 0.57
Trim47-202ENSMUST00000106441 Gm7942L7N277 499 aa18.58■□□□□ 0.56
Trim47-202ENSMUST00000106441 Tnfaip1O70479 316 aa18.58■□□□□ 0.56
Trim47-202ENSMUST00000106441 ShdO88834 343 aa18.58■□□□□ 0.56
Trim47-202ENSMUST00000106441 Il2P04351 169 aa18.58■□□□□ 0.56
Trim47-202ENSMUST00000106441 SagP20443 403 aa18.58■□□□□ 0.56
Trim47-202ENSMUST00000106441 PenkP22005 268 aa18.58■□□□□ 0.56
Trim47-202ENSMUST00000106441 DesP31001 469 aaKnown RBP18.58■□□□□ 0.56
Trim47-202ENSMUST00000106441 Prdx5P99029 210 aa18.58■□□□□ 0.56
Trim47-202ENSMUST00000106441 9930111J21Rik1Q5SVP0 844 aa18.58■□□□□ 0.56
Trim47-202ENSMUST00000106441 Slc5a10Q5SWY8 596 aa18.58■□□□□ 0.56
Trim47-202ENSMUST00000106441 Cd300lfQ6SJQ7 337 aa18.58■□□□□ 0.56
Trim47-202ENSMUST00000106441 Prl3a1Q78Y73 227 aa18.58■□□□□ 0.56
Trim47-202ENSMUST00000106441 Olfr389Q7TRX7 312 aa18.58■□□□□ 0.56
Trim47-202ENSMUST00000106441 Fnip2Q80TD3 1108 aa18.58■□□□□ 0.56
Retrieved 100 of 22,080 RNA–protein pairs in 25.5 ms