RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Arl3Q9WUL7 182 aa9.24□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Kcnd3Q9Z0V1 655 aa9.24□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Mbd3Q9Z2D8 285 aaKnown RBP9.24□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Myl4P09541 193 aaKnown RBP9.23□□□□□ -0.93
Upf3b-201ENSMUST00000076265 AregP31955 248 aa9.23□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Flt3lgP49772 232 aa9.23□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Cct6aP80317 531 aaKnown RBP9.23□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Cdkl4Q3TZA2 342 aa9.23□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Trappc9Q3U0M1 1148 aa9.23□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Sec31aQ3UPL0 1230 aaKnown RBP9.23□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Serpinf2Q61247 491 aa9.23□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Foxc2Q61850 494 aa9.23□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Fstl1Q62356 306 aa9.23□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Pank4Q80YV4 820 aa9.23□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Gpr171Q8BG55 319 aa9.23□□□□□ -0.93
Upf3b-201ENSMUST00000076265 EtnpplQ8BWU8 499 aa9.23□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Nek11Q8C0Q4 628 aa9.23□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Slc36a4Q8CH36 500 aa9.23□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Mul1Q8VCM5 352 aa9.23□□□□□ -0.93
Upf3b-201ENSMUST00000076265 CthQ8VCN5 398 aa9.23□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Ppp1r3aQ99MR9 1089 aa9.23□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Haus2Q9CQS9 234 aa9.23□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Ube2cQ9D1C1 179 aa9.23□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Cntd1Q9D995 334 aa9.23□□□□□ -0.93
Upf3b-201ENSMUST00000076265 DpysQ9EQF5 519 aa9.23□□□□□ -0.93
Upf3b-201ENSMUST00000076265 CtsmQ9JL96 333 aa9.23□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Elovl2Q9JLJ4 292 aa9.23□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Chst11Q9JME2 352 aa9.23□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Adam23Q9R1V7 829 aa9.23□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Spata31d1bE9QA57 1361 aa9.23□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Ubr2Q6WKZ8 1755 aa9.23□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Cfap99A0A140LIX9 648 aa9.23□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Etnk2A7MCT6 385 aa9.23□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Btbd16E9Q173 522 aa9.23□□□□□ -0.93
Upf3b-201ENSMUST00000076265 CpdO89001 1377 aa9.23□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Calm1P0DP26 149 aaKnown RBP9.23□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Calm2P0DP27 149 aaKnown RBP9.23□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Calm3P0DP28 149 aaKnown RBP9.23□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Erbb2P70424 1256 aa9.23□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Lrrc74bQ14BP6 391 aa9.23□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Qsox2Q3TMX7 692 aa9.23□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Fam76bQ80XP8 339 aa9.23□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Crb2Q80YA8 1282 aa9.23□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Nup88Q8CEC0 753 aaKnown RBP9.23□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Pde5aQ8CG03 865 aa9.23□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Slc25a3Q8VEM8 357 aaKnown RBP9.23□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Lrrc40Q9CRC8 602 aa9.23□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Ppp1r3gQ9CW07 347 aa9.23□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Trbv26A0A0B4J1P5 115 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Tex13cD3YU32 604 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Vmn2r54K7N649 806 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Gm3642K7N6V4 267 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Smad6O35182 495 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Alx3O70137 343 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Abcd4O89016 606 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 CryaaP24622 196 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Sult2a2P50236 285 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Gnb5P62881 395 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Tubb5P99024 444 aaKnown RBP9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Prss57Q14B24 284 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 VrtnQ3SYK4 740 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Pde12Q3TIU4 608 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Q3U6N9 222 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Atp13a3Q5XF89 1219 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Nup62Q63850 526 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Maml1Q6T264 1020 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Q8BHB7 409 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Hirip3Q8BLH7 601 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Cnksr3Q8BMA3 555 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Poglut1Q8BYB9 392 aaKnown RBP9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Alx1Q8C8B0 326 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 TwnkQ8CIW5 685 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Zdhhc12Q8VC90 267 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Spats2lQ91WJ7 558 aaKnown RBP9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Metap1dQ9CPW9 335 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Etv5Q9CXC9 510 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Lurap1Q9D6I9 239 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Asb12Q9D738 308 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Smco2Q9DA21 347 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Cyb5r1Q9DB73 305 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Tor1aQ9ER39 333 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Gucy1a3Q9ERL9 691 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 C1qtnf3Q9ES30 246 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Tmem191cQ9JJB1 302 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Rnf4Q9QZS2 194 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Cib2Q9Z309 187 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Trpm3Q5F4S9 1721 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Sned1Q70E20 1403 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 AceP09470 1312 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Gm4131A0A140LJ24 318 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Flvcr1B2RXV4 560 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Gm5796E9Q7M8 205 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 DgkkE9Q7N4 1118 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Rnpepl1G5E872 720 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Gm3629K7N6Y2 205 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Gm10340K7N708 205 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Gm3696K7N751 203 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Gm8281L7N235 204 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Gm6614M0QWR8 670 aa9.22□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Neurod4O09105 330 aa9.22□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 18.4 ms