RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Gm5414Q6IFZ8 552 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Xpo1Q6P5F9 1071 aaKnown RBP9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Arrdc3Q7TPQ9 414 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 HomezQ80W88 542 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Disc1Q811T9 852 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Dyrk4Q8BI55 632 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Usp43Q8BUM9 1132 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Tbc1d17Q8BYH7 645 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Ccdc90bQ8C3X2 256 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Ano4Q8C5H1 955 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Gtse1Q8R080 741 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Iqsec1Q8R0S2 961 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Vopp1Q8R1C3 172 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Zcchc14Q8VIG0 956 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Zdhhc7Q91WU6 308 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Prmt7Q922X9 692 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Dhrs7bQ99J47 323 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Tbc1d21Q9D9D3 336 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Syde1Q9DBZ9 737 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Trpm5Q9JJH7 1158 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Copg1Q9QZE5 874 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Mapk13Q9Z1B7 366 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Grin3aA2AIR5 1135 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Vmn2r14E9Q759 848 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Inpp5aE9QAS7 422 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Gm43302L7N1X8 611 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Gjd2O54851 321 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 PdgfrbP05622 1098 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 DesP31001 469 aaKnown RBP9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Kir3dl1P83555 432 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Atp5jP97450 108 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Gbp10Q000W5 611 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Nfe2Q07279 373 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Trim67Q505D9 768 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Krt32Q62168 407 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Armcx2Q6A058 784 aaKnown RBP9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 DseQ8BLI4 958 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Lca5lQ8C0X0 741 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Tspan14Q8QZY6 270 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Zfp566Q8VCI1 386 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Pcdhb2Q91Y00 799 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Gprc5bQ923Z0 410 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Tcf7l2Q924A0 459 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Abcg3Q99P81 650 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Nipsnap3bQ9CQE1 247 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 MecrQ9DCS3 373 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Ap4b1Q9WV76 738 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Ap4s1Q9WVL1 144 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Wdr49A0A0N4SUK7 710 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Vmn2r121A2BE32 847 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Cyp2b13A6H6J2 491 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Gm5930D3Z257 264 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Cyp2c69E9PXC3 491 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Gm3336J3QMQ6 198 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 BC024978J3QPC3 361 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Mup13L7N222 235 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 H2-Eb1P04230 264 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Lamp2P17047 415 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Il6raP22272 460 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 FynP39688 537 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Cyp2c40P56657 491 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Eml1Q05BC3 814 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Gdf3Q07104 366 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Asprv1Q09PK2 339 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Mgat3Q10470 538 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Gm5431Q5NCB3 844 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Deup1Q7M6Y5 601 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Clec18aQ7TSQ1 534 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Cept1Q8BGS7 416 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Nlrp4bQ8C6J9 863 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Gsg1Q8R1W2 324 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Tmco4Q91WU4 631 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Prpf19Q99KP6 504 aaKnown RBP9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Haus8Q99L00 373 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Hacd2Q9D3B1 254 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Syap1Q9D5V6 365 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Ddx59Q9DBN9 619 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Mmp19Q9JHI0 527 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Spag6Q9JLI7 507 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Fiz1Q9WTJ4 500 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 VarsQ9Z1Q9 1263 aaKnown RBP9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Trbv4A0A075B5I2 113 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Skint1A7TZE6 364 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Ankrd34aB2RW11 495 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Kcnt2D3Z649 1135 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Pot1bH7BX60 640 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Cd72P21855 354 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Msr1P30204 458 aaKnown RBP9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 LmnaP48678 665 aaKnown RBP9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Tmem207P86045 143 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 AurkaP97477 395 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Ptchd3Q0EEE2 906 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Fam129aQ3UW53 926 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Fam160a1Q505K2 1081 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Mfsd3Q5U419 412 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Podnl1Q6P3Y9 559 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Sarm1Q6PDS3 724 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Elmo2Q8BHL5 732 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Lig4Q8BTF7 911 aa9.93□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Tlk1Q8C0V0 766 aa9.93□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 41.8 ms