RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Cyp2g1Q9WV19 494 aa9.96□□□□□ -0.81
Syne1-201ENSMUST00000041639 Zfp472B0V2W5 534 aa9.96□□□□□ -0.82
Syne1-201ENSMUST00000041639 Ssxb8B1AY40 170 aa9.96□□□□□ -0.82
Syne1-201ENSMUST00000041639 Gm5814J3QP80 125 aa9.96□□□□□ -0.82
Syne1-201ENSMUST00000041639 Bnip3O55003 187 aa9.96□□□□□ -0.82
Syne1-201ENSMUST00000041639 Nos2P29477 1144 aa9.96□□□□□ -0.82
Syne1-201ENSMUST00000041639 Slc17a7Q3TXX4 560 aa9.96□□□□□ -0.82
Syne1-201ENSMUST00000041639 Trpc5osQ3UHV4 110 aa9.96□□□□□ -0.82
Syne1-201ENSMUST00000041639 Lipo3Q3UT41 399 aa9.96□□□□□ -0.82
Syne1-201ENSMUST00000041639 Nudcd1Q6PIP5 582 aa9.96□□□□□ -0.82
Syne1-201ENSMUST00000041639 4930503B20RikQ80ZP0 234 aa9.96□□□□□ -0.82
Syne1-201ENSMUST00000041639 Gpihbp1Q9D1N2 228 aa9.96□□□□□ -0.82
Syne1-201ENSMUST00000041639 Pcdh7A0A0A6YY83 1255 aa9.96□□□□□ -0.82
Syne1-201ENSMUST00000041639 Fam171a2A2A699 822 aa9.96□□□□□ -0.82
Syne1-201ENSMUST00000041639 Trim30bE9PVL6 203 aa9.96□□□□□ -0.82
Syne1-201ENSMUST00000041639 Cd44P15379 778 aa9.96□□□□□ -0.82
Syne1-201ENSMUST00000041639 Colec11Q3SXB8 272 aa9.96□□□□□ -0.82
Syne1-201ENSMUST00000041639 Mrm3Q5ND52 418 aa9.96□□□□□ -0.82
Syne1-201ENSMUST00000041639 Fnip2Q80TD3 1108 aa9.96□□□□□ -0.82
Syne1-201ENSMUST00000041639 Trub1Q8C0D0 338 aaKnown RBP9.96□□□□□ -0.82
Syne1-201ENSMUST00000041639 Kdm1bQ8CIG3 826 aa9.96□□□□□ -0.82
Syne1-201ENSMUST00000041639 Acsm2Q8K0L3 575 aa9.96□□□□□ -0.82
Syne1-201ENSMUST00000041639 Cpt1bQ924X2 772 aa9.96□□□□□ -0.82
Syne1-201ENSMUST00000041639 Q9CPS8 106 aa9.96□□□□□ -0.82
Syne1-201ENSMUST00000041639 Use1Q9CQ56 270 aa9.96□□□□□ -0.82
Syne1-201ENSMUST00000041639 Slc25a19Q9DAM5 318 aa9.96□□□□□ -0.82
Syne1-201ENSMUST00000041639 Tnfrsf21Q9EPU5 655 aa9.96□□□□□ -0.82
Syne1-201ENSMUST00000041639 HnrnpdlQ9Z130 301 aaKnown RBP9.96□□□□□ -0.82
Syne1-201ENSMUST00000041639 Slfn14V9GXG1 899 aa9.96□□□□□ -0.82
Syne1-201ENSMUST00000041639 Gm11983V9GXS8 105 aa9.96□□□□□ -0.82
Syne1-201ENSMUST00000041639 Znf541Q0GGX2 1363 aa9.96□□□□□ -0.82
Syne1-201ENSMUST00000041639 Golga4Q91VW5 2238 aa9.96□□□□□ -0.82
Syne1-201ENSMUST00000041639 Gm21497A0A087WRK3 222 aa9.96□□□□□ -0.82
Syne1-201ENSMUST00000041639 Hmox2O70252 315 aa9.96□□□□□ -0.82
Syne1-201ENSMUST00000041639 Per3O70361 1113 aa9.96□□□□□ -0.82
Syne1-201ENSMUST00000041639 Kcnn4O89109 425 aa9.96□□□□□ -0.82
Syne1-201ENSMUST00000041639 Tap1P21958 724 aa9.96□□□□□ -0.82
Syne1-201ENSMUST00000041639 Epha3P29319 983 aa9.96□□□□□ -0.82
Syne1-201ENSMUST00000041639 Myl12bQ3THE2 172 aaKnown RBP9.96□□□□□ -0.82
Syne1-201ENSMUST00000041639 Tyw3Q8BSA9 257 aa9.96□□□□□ -0.82
Syne1-201ENSMUST00000041639 Pex5lQ8C437 567 aa9.96□□□□□ -0.82
Syne1-201ENSMUST00000041639 Angel2Q8K1C0 544 aa9.96□□□□□ -0.82
Syne1-201ENSMUST00000041639 Olfr697Q8VFM4 317 aa9.96□□□□□ -0.82
Syne1-201ENSMUST00000041639 Mrto4Q9D0I8 239 aaKnown RBP9.96□□□□□ -0.82
Syne1-201ENSMUST00000041639 PignQ9R1S3 931 aa9.96□□□□□ -0.82
Syne1-201ENSMUST00000041639 NhsB1AV60 1647 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Vmn2r27D3YUK6 857 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Stk16O88697 305 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Psme3P61290 254 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Cdkl4Q3TZA2 342 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Kctd21Q3URF8 260 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Fnip1Q68FD7 1165 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Pcid2Q8BFV2 399 aaKnown RBP9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Fbxl21Q8BFZ4 434 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Mapkap1Q8BKH7 522 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 NkrfQ8BY02 690 aaKnown RBP9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Gpat3Q8C0N2 438 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Tmem161aQ8VCA6 480 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Unc93b1Q8VCW4 598 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Sorcs3Q8VI51 1219 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Tcirg1Q9JHF5 834 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Gm35911A0A1D5RLS7 214 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Zbed5B2RPU8 756 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Pias1O88907 651 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Wnt7aP24383 349 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Htr5bP31387 370 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Epb41P48193 858 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Ephb3P54754 993 aaKnown RBP9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 TankP70347 448 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Meis2P97367 477 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Kansl1lQ5DTI6 991 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Trim45Q6PFY8 580 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Klhl26Q8BGY4 606 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 DseQ8BLI4 958 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Dnajc19Q9CQV7 116 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Katna1Q9WV86 491 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Gm45233A0A0N4SVE0 221 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Wnt10bP48614 389 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Gtf2bP62915 316 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Ano7Q14AT5 859 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Gm8773Q3UQ24 132 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Fam20cQ5MJS3 579 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Slc26a2Q62273 739 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Bcl2l1Q64373 233 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Atp11bQ6DFW5 1175 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Slc39a14Q75N73 489 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 NwcQ9CQI4 244 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Kctd4Q9D7X1 259 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 4930407I10RikD3Z5T8 1512 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Cps1Q8C196 1500 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Disp2Q8CIP5 1345 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Slc4a5E9Q3M5 1116 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Gria1P23818 907 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 NadkP58058 439 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Ly9Q01965 654 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Zbtb14Q08376 449 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Brip1Q5SXJ3 1174 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Fbxw8Q8BIA4 598 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Hdhd5Q91WM2 419 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 KlbQ99N32 1043 aa9.95□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 21.7 ms