RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Acot8P58137 320 aa17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Itga4Q00651 1039 aa17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Clec4a4Q5YIR8 236 aa17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Mtmr10Q7TPM9 771 aa17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Suz12Q80U70 741 aaKnown RBP17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Tmem121Q80XA0 318 aa17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Afap1l1Q8BZI0 768 aa17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Gmpr2Q99L27 348 aa17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Sike1Q9CPR7 207 aa17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Ergic3Q9CQE7 383 aa17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Echdc3Q9D7J9 300 aa17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Plagl1Q9JLQ4 704 aa17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 CasrQ9QY96 1079 aa17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Apobec2Q9WV35 224 aa17.12■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Gm10477F6SW83 55 aa17.11■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Il4i1O09046 630 aa17.11■□□□□ 0.33
Ctcf-201ENSMUST00000005841 C1qbpO35658 278 aa17.11■□□□□ 0.33
Ctcf-201ENSMUST00000005841 ShdO88834 343 aa17.11■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Oas1aP11928 367 aa17.11■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Lta4hP24527 611 aa17.11■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Cct8P42932 548 aa17.11■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Psme3P61290 254 aa17.11■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Kmt5aQ2YDW7 349 aa17.11■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Gdpgp1Q3TLS3 386 aa17.11■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Zfp341Q6PGC9 846 aa17.11■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Cspg5Q71M36 566 aa17.11■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Ccdc184Q8BMK5 191 aa17.11■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Uba3Q8C878 462 aa17.11■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Slc45a3Q8K0H7 553 aa17.11■□□□□ 0.33
Ctcf-201ENSMUST00000005841 MlklQ9D2Y4 472 aa17.11■□□□□ 0.33
Ctcf-201ENSMUST00000005841 NinQ61043 2035 aa17.11■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Gm28168A0A087WNP1 180 aa17.11■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Gm13040A2A8C4 496 aa17.11■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Gm13101A2ASJ0 481 aa17.11■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Gm13119B1ARV5 481 aa17.11■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Gm281D3Z1Y0 860 aa17.11■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Daw1D3Z7A5 415 aa17.11■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Irf3P70671 419 aa17.11■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Cry1P97784 606 aa17.11■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Slc22a23Q3UHH2 689 aa17.11■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Sorbs2Q3UTJ2 1180 aaKnown RBP17.11■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Fnip2Q80TD3 1108 aa17.11■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Mis18bp1Q80WQ8 998 aa17.11■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Pdk1Q8BFP9 434 aaKnown RBP17.11■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Pcdhb7Q8CDY9 829 aa17.11■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Klrb1fQ8VD98 217 aa17.11■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Snrnp25Q8VIK1 123 aa17.11■□□□□ 0.33
Ctcf-201ENSMUST00000005841 KlbQ99N32 1043 aa17.11■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Tnfsf13Q9D777 241 aa17.11■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Ap4b1Q9WV76 738 aa17.11■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Klhl4B1AZR0 717 aa17.11■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Krt13P08730 437 aa17.11■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Prkaa2Q8BRK8 552 aa17.11■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Adam32Q8K410 754 aa17.11■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Tbx20Q9ES03 445 aa17.11■□□□□ 0.33
Ctcf-201ENSMUST00000005841 ArntlQ9WTL8 632 aa17.11■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Adgra2Q91ZV8 1336 aa17.1■□□□□ 0.33
Ctcf-201ENSMUST00000005841 E230025N22RikG5E8S3 482 aa17.1■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Cyp2j6O54750 501 aa17.1■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Hk1P17710 974 aa17.1■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Vps45P97390 570 aa17.1■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Abcb7Q61102 752 aaKnown RBP17.1■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Dlx3Q64205 287 aa17.1■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Tas2r115Q7M719 310 aa17.1■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Cnksr2Q80YA9 1032 aa17.1■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Xylt1Q811B1 953 aa17.1■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Tmem62Q8BXJ9 643 aa17.1■□□□□ 0.33
Ctcf-201ENSMUST00000005841 HscbQ8K3A0 234 aa17.1■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Mcm8Q9CWV1 833 aa17.1■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Cab39lQ9DB16 337 aa17.1■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Tle2Q9WVB2 767 aa17.1■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Olfr625-ps1A0A140T8L4 321 aa17.1■□□□□ 0.33
Ctcf-201ENSMUST00000005841 1700064H15RikD3Z4D4 81 aa17.1■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Eepd1Q3TGW2 569 aa17.1■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Cntn4Q69Z26 1026 aa17.1■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Fndc11Q80WB0 326 aa17.1■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Mark4Q8CIP4 752 aa17.1■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Zcchc9Q8R1J3 271 aaKnown RBP17.1■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Olfr617Q8VGA1 318 aa17.1■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Vta1Q9CR26 309 aa17.1■□□□□ 0.33
Ctcf-201ENSMUST00000005841 1700123K08RikQ9D991 295 aa17.1■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Ngly1Q9JI78 651 aa17.1■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Gm4841E9QAA8 417 aa17.1■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Gm13128L7MU96 475 aa17.1■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Atn1O35126 1175 aa17.1■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Pdcd5P56812 126 aa17.1■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Cog7Q3UM29 770 aa17.1■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Galnt2Q6PB93 570 aa17.1■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Plekha6Q7TQG1 1173 aa17.1■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Lca5lQ8C0X0 741 aa17.1■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Serpinb10Q8K1K6 397 aa17.1■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Ccdc59Q8R2N0 240 aaKnown RBP17.1■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Pcdhga11Q91XY8 933 aa17.1■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Fam32aQ9CR80 112 aaKnown RBP17.1■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Smpd3Q9JJY3 655 aa17.1■□□□□ 0.33
Ctcf-201ENSMUST00000005841 P01673 111 aa17.09■□□□□ 0.33
Ctcf-201ENSMUST00000005841 SiaeP70665 541 aa17.09■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Nsun2Q1HFZ0 757 aaKnown RBP17.09■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Col28a1Q2UY11 1141 aa17.09■□□□□ 0.33
Ctcf-201ENSMUST00000005841 Olfr463Q5SW49 311 aa17.09■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 26.4 ms