RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Zfp566Q8VCI1 386 aa19.03■□□□□ 0.64
Shkbp1-201ENSMUST00000003857 Nsmce2Q91VT1 247 aa19.03■□□□□ 0.64
Shkbp1-201ENSMUST00000003857 Catsper1Q91ZR5 686 aa19.03■□□□□ 0.64
Shkbp1-201ENSMUST00000003857 Stard13Q923Q2 1113 aa19.03■□□□□ 0.64
Shkbp1-201ENSMUST00000003857 Tex19.1Q99MV2 351 aa19.03■□□□□ 0.64
Shkbp1-201ENSMUST00000003857 CenpsQ9D084 142 aa19.03■□□□□ 0.64
Shkbp1-201ENSMUST00000003857 Tbc1d21Q9D9D3 336 aa19.03■□□□□ 0.64
Shkbp1-201ENSMUST00000003857 Lrrc46Q9DAP0 323 aa19.03■□□□□ 0.64
Shkbp1-201ENSMUST00000003857 Cacng4Q9JJV4 327 aa19.03■□□□□ 0.64
Shkbp1-201ENSMUST00000003857 TxnP10639 105 aaKnown RBP19.02■□□□□ 0.64
Shkbp1-201ENSMUST00000003857 Lamp2P17047 415 aa19.02■□□□□ 0.64
Shkbp1-201ENSMUST00000003857 PpargP37238 505 aa19.02■□□□□ 0.64
Shkbp1-201ENSMUST00000003857 Mc4rP56450 332 aa19.02■□□□□ 0.64
Shkbp1-201ENSMUST00000003857 AcadsQ07417 412 aaKnown RBP19.02■□□□□ 0.64
Shkbp1-201ENSMUST00000003857 Cd36Q08857 472 aa19.02■□□□□ 0.64
Shkbp1-201ENSMUST00000003857 1700061G19RikQ08EE8 705 aa19.02■□□□□ 0.64
Shkbp1-201ENSMUST00000003857 Mief2Q5NCS9 454 aa19.02■□□□□ 0.64
Shkbp1-201ENSMUST00000003857 Tas2r125Q7M710 311 aa19.02■□□□□ 0.64
Shkbp1-201ENSMUST00000003857 Gramd1bQ80TI0 738 aa19.02■□□□□ 0.64
Shkbp1-201ENSMUST00000003857 Tmem198Q8BG75 360 aa19.02■□□□□ 0.64
Shkbp1-201ENSMUST00000003857 Adprhl2Q8CG72 370 aa19.02■□□□□ 0.64
Shkbp1-201ENSMUST00000003857 Gprc5bQ923Z0 410 aa19.02■□□□□ 0.64
Shkbp1-201ENSMUST00000003857 Mtfr1Q99MB2 328 aa19.02■□□□□ 0.64
Shkbp1-201ENSMUST00000003857 Vps28Q9D1C8 221 aa19.02■□□□□ 0.64
Shkbp1-201ENSMUST00000003857 Klhdc8bQ9D2D9 354 aa19.02■□□□□ 0.64
Shkbp1-201ENSMUST00000003857 VapbQ9QY76 243 aaKnown RBP19.02■□□□□ 0.64
Shkbp1-201ENSMUST00000003857 Fiz1Q9WTJ4 500 aa19.02■□□□□ 0.64
Shkbp1-201ENSMUST00000003857 Vmn2r17E9PYF5 849 aa19.01■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Vmn2r96E9PZU5 664 aa19.01■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Gm6408J3QNG1 320 aa19.01■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Gm3402K7N5P2 326 aa19.01■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Chrna4O70174 629 aa19.01■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Hsd11b2P51661 386 aa19.01■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Muc1Q02496 630 aa19.01■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 MyrfQ3UR85 1138 aa19.01■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Olfr464Q5SW48 313 aa19.01■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 PhgdhQ61753 533 aaKnown RBP19.01■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Sema3cQ62181 751 aa19.01■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Jade1Q6ZPI0 834 aaKnown RBP19.01■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Kirrel2Q7TSU7 700 aa19.01■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Alkbh8Q80Y20 664 aa19.01■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Slc41a1Q8BJA2 512 aa19.01■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Rbbp5Q8BX09 538 aaKnown RBP19.01■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Vmn1r213Q8R278 384 aa19.01■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Vps11Q91W86 941 aaKnown RBP19.01■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 DarsQ922B2 501 aaKnown RBP19.01■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Tcf7l2Q924A0 459 aa19.01■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 CygbQ9CX80 190 aa19.01■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Q9D979 236 aa19.01■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Cyp3a41aQ9JMA7 504 aa19.01■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 RpgrQ9R0X5 1001 aa19.01■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Ruvbl2Q9WTM5 463 aaKnown RBP19.01■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 A0A1Y7VP24 259 aa19.01■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Pramef17A2ASJ1 475 aa19.01■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Sbk3P0C5K0 361 aa19.01■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Htr2cP34968 459 aa19.01■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Q14AM7 275 aa19.01■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Has1Q61647 583 aa19.01■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Tpd52Q62393 224 aa19.01■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Adamts2Q8C9W3 1213 aa19.01■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Fam83aQ8K2P2 436 aa19.01■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Arhgef3Q91X46 524 aa19.01■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Pip4k2cQ91XU3 421 aa19.01■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Ssxb1Q9CPU1 170 aa19.01■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Tmem114Q9D563 222 aa19.01■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 IcmtQ9EQK7 283 aa19.01■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Cdkl2Q9QUK0 568 aa19.01■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Dcun1d1Q9QZ73 259 aa19.01■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Il18rapQ9Z2B1 614 aa19.01■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Gm28043E0CXC2 719 aa19■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Cyp2c68K7N6C2 491 aa19■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Ap1g1P22892 822 aa19■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Adra2bP30545 450 aa19■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Slc16a10Q3U9N9 512 aa19■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Mfsd3Q5U419 412 aa19■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Dlx3Q64205 287 aa19■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Cd300lfQ6SJQ7 337 aa19■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Slc39a14Q75N73 489 aa19■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Tigd3Q7TM95 470 aa19■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Far2Q7TNT2 515 aa19■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Sema3dQ8BH34 777 aa19■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Fam163bQ8BUM6 167 aa19■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Cacng3Q9JJV5 315 aa19■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 CdylQ9WTK2 593 aa19■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Slc16a6B1AT66 607 aa19■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Ptchd4B9EKX1 904 aa19■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Adamts14E9PX39 1209 aa19■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Mthfd2P18155 350 aaKnown RBP19■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Aldh3a1P47739 453 aa19■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Atoh1P48985 351 aa19■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 AdslP54822 484 aa19■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Traf6P70196 530 aa19■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Serpina5P70458 405 aa19■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Sec31bQ3TZ89 1158 aa19■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Rad9bQ6WBX7 403 aa19■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Kctd13Q8BGV7 329 aa19■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Pcdhb7Q8CDY9 829 aa19■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Mrpl47Q8K2Y7 252 aa19■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Pcdha11Q91Y19 950 aa19■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 B4galt3Q91YY2 395 aa19■□□□□ 0.63
Retrieved 100 of 22,080 RNA–protein pairs in 36.3 ms