RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 PTPRN2Q92932 1015 aa10.32□□□□□ -0.76
PHGDH-222ENST00000641587 CHP1Q99653 195 aa10.32□□□□□ -0.76
PHGDH-222ENST00000641587 NRSN2Q9GZP1 204 aa10.32□□□□□ -0.76
PHGDH-222ENST00000641587 MIS12Q9H081 205 aa10.32□□□□□ -0.76
PHGDH-222ENST00000641587 KCNF1Q9H3M0 494 aa10.32□□□□□ -0.76
PHGDH-222ENST00000641587 HAUS4Q9H6D7 363 aa10.32□□□□□ -0.76
PHGDH-222ENST00000641587 NHEJ1Q9H9Q4 299 aaPredicted RBP10.32□□□□□ -0.76
PHGDH-222ENST00000641587 FZD4Q9ULV1 537 aa10.32□□□□□ -0.76
PHGDH-222ENST00000641587 PCDHB1Q9Y5F3 818 aa10.32□□□□□ -0.76
PHGDH-222ENST00000641587 BZW2Q9Y6E2 419 aaKnown RBP10.32□□□□□ -0.76
PHGDH-222ENST00000641587 ZNF462Q96JM2 2506 aa10.31□□□□□ -0.76
PHGDH-222ENST00000641587 EDDM13A0A1B0GTR0 161 aa10.31□□□□□ -0.76
PHGDH-222ENST00000641587 M0QYV0 167 aa10.31□□□□□ -0.76
PHGDH-222ENST00000641587 TK2O00142 265 aa10.31□□□□□ -0.76
PHGDH-222ENST00000641587 TRIM38O00635 465 aa10.31□□□□□ -0.76
PHGDH-222ENST00000641587 RRP8O43159 456 aaKnown RBP10.31□□□□□ -0.76
PHGDH-222ENST00000641587 ARHGAP6O43182 974 aa10.31□□□□□ -0.76
PHGDH-222ENST00000641587 IRAK2O43187 625 aa10.31□□□□□ -0.76
PHGDH-222ENST00000641587 RTN2O75298 545 aa10.31□□□□□ -0.76
PHGDH-222ENST00000641587 LUC7L3O95232 432 aaKnown RBP10.31□□□□□ -0.76
PHGDH-222ENST00000641587 IL1BP01584 269 aa10.31□□□□□ -0.76
PHGDH-222ENST00000641587 PAEPP09466 180 aa10.31□□□□□ -0.76
PHGDH-222ENST00000641587 C1SP09871 688 aa10.31□□□□□ -0.76
PHGDH-222ENST00000641587 VDRP11473 427 aa10.31□□□□□ -0.76
PHGDH-222ENST00000641587 CYP11B1P15538 503 aa10.31□□□□□ -0.76
PHGDH-222ENST00000641587 GOT1P17174 413 aa10.31□□□□□ -0.76
PHGDH-222ENST00000641587 TNFAIP3P21580 790 aa10.31□□□□□ -0.76
PHGDH-222ENST00000641587 FECHP22830 423 aa10.31□□□□□ -0.76
PHGDH-222ENST00000641587 GLDCP23378 1020 aa10.31□□□□□ -0.76
PHGDH-222ENST00000641587 CLCN1P35523 988 aa10.31□□□□□ -0.76
PHGDH-222ENST00000641587 CYLC1P35663 651 aaPredicted RBP10.31□□□□□ -0.76
PHGDH-222ENST00000641587 PRKCIP41743 596 aa10.31□□□□□ -0.76
PHGDH-222ENST00000641587 ARRB1P49407 418 aaPredicted RBP10.31□□□□□ -0.76
PHGDH-222ENST00000641587 CCR5P51681 352 aa10.31□□□□□ -0.76
PHGDH-222ENST00000641587 CXADRP78310 365 aa10.31□□□□□ -0.76
PHGDH-222ENST00000641587 CDK17Q00537 523 aa10.31□□□□□ -0.76
PHGDH-222ENST00000641587 TLE3Q04726 772 aa10.31□□□□□ -0.76
PHGDH-222ENST00000641587 MS4A13Q5J8X5 152 aa10.31□□□□□ -0.76
PHGDH-222ENST00000641587 RAP1GAP2Q684P5 730 aa10.31□□□□□ -0.76
PHGDH-222ENST00000641587 NAPEPLDQ6IQ20 393 aa10.31□□□□□ -0.76
PHGDH-222ENST00000641587 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.31□□□□□ -0.76
PHGDH-222ENST00000641587 KDM7AQ6ZMT4 941 aa10.31□□□□□ -0.76
PHGDH-222ENST00000641587 SND1Q7KZF4 910 aaKnown RBP eCLIP10.31□□□□□ -0.762e-7■■■□□ 15.9
PHGDH-222ENST00000641587 ZNF571Q7Z3V5 609 aaPredicted RBP10.31□□□□□ -0.76
PHGDH-222ENST00000641587 IRF2BP2Q7Z5L9 587 aa10.31□□□□□ -0.76
PHGDH-222ENST00000641587 NOP9Q86U38 636 aaKnown RBP10.31□□□□□ -0.76
PHGDH-222ENST00000641587 ERICH1Q86X53 443 aa10.31□□□□□ -0.76
PHGDH-222ENST00000641587 TMEM139Q8IV31 216 aa10.31□□□□□ -0.76
PHGDH-222ENST00000641587 UNC45BQ8IWX7 931 aa10.31□□□□□ -0.76
PHGDH-222ENST00000641587 SPACA3Q8IXA5 215 aa10.31□□□□□ -0.76
PHGDH-222ENST00000641587 SCML4Q8N228 414 aa10.31□□□□□ -0.76
PHGDH-222ENST00000641587 EPS8L1Q8TE68 723 aa10.31□□□□□ -0.76
PHGDH-222ENST00000641587 DQX1Q8TE96 717 aaKnown RBP10.31□□□□□ -0.76
PHGDH-222ENST00000641587 SLC35F5Q8WV83 523 aa10.31□□□□□ -0.76
PHGDH-222ENST00000641587 SKA1Q96BD8 255 aa10.31□□□□□ -0.76
PHGDH-222ENST00000641587 AGPAT1Q99943 283 aa10.31□□□□□ -0.76
PHGDH-222ENST00000641587 MYOCQ99972 504 aa10.31□□□□□ -0.76
PHGDH-222ENST00000641587 ACP6Q9NPH0 428 aa10.31□□□□□ -0.76
PHGDH-222ENST00000641587 SPTLC3Q9NUV7 552 aa10.31□□□□□ -0.76
PHGDH-222ENST00000641587 ARHGAP20Q9P2F6 1191 aa10.31□□□□□ -0.76
PHGDH-222ENST00000641587 SARDHQ9UL12 918 aa10.31□□□□□ -0.76
PHGDH-222ENST00000641587 CNTN6Q9UQ52 1028 aa10.31□□□□□ -0.76
PHGDH-222ENST00000641587 CLCA2Q9UQC9 943 aa10.31□□□□□ -0.76
PHGDH-222ENST00000641587 CEP83Q9Y592 693 aa10.31□□□□□ -0.76
PHGDH-222ENST00000641587 CFAP46Q8IYW2 2715 aa10.31□□□□□ -0.76
PHGDH-222ENST00000641587 TBC1D3DA0A087WVF3 549 aa10.3□□□□□ -0.76
PHGDH-222ENST00000641587 TBC1D3IA0A087WXS9 549 aa10.3□□□□□ -0.76
PHGDH-222ENST00000641587 TBC1D3EA0A087X179 549 aa10.3□□□□□ -0.76
PHGDH-222ENST00000641587 TBC1D3KA0A087X1G2 549 aa10.3□□□□□ -0.76
PHGDH-222ENST00000641587 SSU72P8A0A1W2PR75 194 aa10.3□□□□□ -0.76
PHGDH-222ENST00000641587 FAM170AA1A519 330 aa10.3□□□□□ -0.76
PHGDH-222ENST00000641587 TARSL2A2RTX5 802 aaKnown RBP10.3□□□□□ -0.76
PHGDH-222ENST00000641587 TYW5A2RUC4 315 aaKnown RBP10.3□□□□□ -0.76
PHGDH-222ENST00000641587 TBC1D3FA6NER0 549 aaPredicted RBP10.3□□□□□ -0.76
PHGDH-222ENST00000641587 TBC1D3LB9A6J9 549 aa10.3□□□□□ -0.76
PHGDH-222ENST00000641587 PYCARD-AS1I3L0S3 204 aa10.3□□□□□ -0.76
PHGDH-222ENST00000641587 YKT6O15498 198 aa10.3□□□□□ -0.76
PHGDH-222ENST00000641587 MED7O43513 233 aa10.3□□□□□ -0.76
PHGDH-222ENST00000641587 LATO43561 262 aa10.3□□□□□ -0.76
PHGDH-222ENST00000641587 MMEP08473 750 aa10.3□□□□□ -0.76
PHGDH-222ENST00000641587 TBC1D3HP0C7X1 549 aa10.3□□□□□ -0.76
PHGDH-222ENST00000641587 MYF5P13349 255 aa10.3□□□□□ -0.76
PHGDH-222ENST00000641587 PDGFRAP16234 1089 aa10.3□□□□□ -0.76
PHGDH-222ENST00000641587 CKMT2P17540 419 aa10.3□□□□□ -0.76
PHGDH-222ENST00000641587 C5AR1P21730 350 aa10.3□□□□□ -0.76
PHGDH-222ENST00000641587 RXRGP48443 463 aa10.3□□□□□ -0.76
PHGDH-222ENST00000641587 PITX1P78337 314 aaPredicted RBP10.3□□□□□ -0.76
PHGDH-222ENST00000641587 ECT2LQ008S8 904 aa10.3□□□□□ -0.76
PHGDH-222ENST00000641587 MAPK8IP2Q13387 824 aaPredicted RBP10.3□□□□□ -0.76
PHGDH-222ENST00000641587 SPA17Q15506 151 aa10.3□□□□□ -0.76
PHGDH-222ENST00000641587 PROX2Q3B8N5 592 aa10.3□□□□□ -0.76
PHGDH-222ENST00000641587 TBC1D25Q3MII6 688 aa10.3□□□□□ -0.76
PHGDH-222ENST00000641587 HS1BP3Q53T59 392 aa10.3□□□□□ -0.76
PHGDH-222ENST00000641587 HGSNATQ68CP4 663 aa10.3□□□□□ -0.76
PHGDH-222ENST00000641587 TBC1D3GQ6DHY5 549 aa10.3□□□□□ -0.76
PHGDH-222ENST00000641587 TBC1D3CQ6IPX1 549 aa10.3□□□□□ -0.76
PHGDH-222ENST00000641587 LCLAT1Q6UWP7 414 aa10.3□□□□□ -0.76
PHGDH-222ENST00000641587 RAD9BQ6WBX8 426 aa10.3□□□□□ -0.76
PHGDH-222ENST00000641587 GPR155Q7Z3F1 870 aa10.3□□□□□ -0.76
PHGDH-222ENST00000641587 ZNF605Q86T29 641 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms