RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 CPQQ9Y646 472 aa9.04□□□□□ -0.96
PHGDH-219ENST00000641513 MAD1L1Q9Y6D9 718 aa9.04□□□□□ -0.96
PHGDH-219ENST00000641513 ZFP37Q9Y6Q3 630 aaPredicted RBP9.04□□□□□ -0.96
PHGDH-219ENST00000641513 IGLV3-10A0A075B6K4 115 aa9.03□□□□□ -0.96
PHGDH-219ENST00000641513 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.03□□□□□ -0.96
PHGDH-219ENST00000641513 EXOC1LA0A1B0GW35 172 aa9.03□□□□□ -0.96
PHGDH-219ENST00000641513 TYW5A2RUC4 315 aaKnown RBP9.03□□□□□ -0.96
PHGDH-219ENST00000641513 CCT8L1PA6NM43 557 aa9.03□□□□□ -0.96
PHGDH-219ENST00000641513 DRGXA6NNA5 263 aa9.03□□□□□ -0.96
PHGDH-219ENST00000641513 E7ESA3 106 aa9.03□□□□□ -0.96
PHGDH-219ENST00000641513 C5orf67F2Z3F1 127 aa9.03□□□□□ -0.96
PHGDH-219ENST00000641513 POC1B-GALNT4F8VUJ3 575 aa9.03□□□□□ -0.96
PHGDH-219ENST00000641513 PER2O15055 1255 aa9.03□□□□□ -0.96
PHGDH-219ENST00000641513 MATN3O15232 486 aa9.03□□□□□ -0.96
PHGDH-219ENST00000641513 SNX3O60493 162 aa9.03□□□□□ -0.96
PHGDH-219ENST00000641513 CLASP2O75122 1294 aaKnown RBP9.03□□□□□ -0.96
PHGDH-219ENST00000641513 AVILO75366 819 aa9.03□□□□□ -0.96
PHGDH-219ENST00000641513 SPAG6O75602 509 aa9.03□□□□□ -0.96
PHGDH-219ENST00000641513 RFPL2O75678 378 aa9.03□□□□□ -0.96
PHGDH-219ENST00000641513 RASSF9O75901 435 aa9.03□□□□□ -0.96
PHGDH-219ENST00000641513 FAM155BO75949 473 aa9.03□□□□□ -0.96
PHGDH-219ENST00000641513 KLKB1P03952 638 aa9.03□□□□□ -0.96
PHGDH-219ENST00000641513 PTPN2P17706 415 aa9.03□□□□□ -0.96
PHGDH-219ENST00000641513 NFKB1P19838 968 aa9.03□□□□□ -0.96
PHGDH-219ENST00000641513 SSTR1P30872 391 aa9.03□□□□□ -0.96
PHGDH-219ENST00000641513 MAPKAPK2P49137 400 aa9.03□□□□□ -0.96
PHGDH-219ENST00000641513 SESN2P58004 480 aaPredicted RBP9.03□□□□□ -0.96
PHGDH-219ENST00000641513 RPS24P62847 133 aaKnown RBP9.03□□□□□ -0.96
PHGDH-219ENST00000641513 ZNF33AQ06730 810 aa9.03□□□□□ -0.96
PHGDH-219ENST00000641513 CCDC15Q0P6D6 951 aa9.03□□□□□ -0.96
PHGDH-219ENST00000641513 IFT88Q13099 833 aa9.03□□□□□ -0.96
PHGDH-219ENST00000641513 ZBTB17Q13105 803 aa9.03□□□□□ -0.96
PHGDH-219ENST00000641513 ZNF177Q13360 481 aaPredicted RBP9.03□□□□□ -0.96
PHGDH-219ENST00000641513 QPCTQ16769 361 aa9.03□□□□□ -0.96
PHGDH-219ENST00000641513 CCDC38Q502W7 563 aa9.03□□□□□ -0.96
PHGDH-219ENST00000641513 ARHGAP15Q53QZ3 475 aa9.03□□□□□ -0.96
PHGDH-219ENST00000641513 FAM133BQ5BKY9 247 aaKnown RBP9.03□□□□□ -0.96
PHGDH-219ENST00000641513 SWT1Q5T5J6 900 aaKnown RBP9.03□□□□□ -0.96
PHGDH-219ENST00000641513 ADGRF1Q5T601 910 aa9.03□□□□□ -0.96
PHGDH-219ENST00000641513 GPR158Q5T848 1215 aa9.03□□□□□ -0.96
PHGDH-219ENST00000641513 IL31Q6EBC2 164 aa9.03□□□□□ -0.96
PHGDH-219ENST00000641513 CASC4Q6P4E1 433 aa9.03□□□□□ -0.96
PHGDH-219ENST00000641513 ELMSAN1Q6PJG2 1045 aa9.03□□□□□ -0.96
PHGDH-219ENST00000641513 GAREM2Q75VX8 874 aa9.03□□□□□ -0.96
PHGDH-219ENST00000641513 OTOP3Q7RTS5 596 aa9.03□□□□□ -0.96
PHGDH-219ENST00000641513 RBM23Q86U06 439 aaKnown RBP9.03□□□□□ -0.96
PHGDH-219ENST00000641513 TMC8Q8IU68 726 aa9.03□□□□□ -0.96
PHGDH-219ENST00000641513 LRRC49Q8IUZ0 686 aa9.03□□□□□ -0.96
PHGDH-219ENST00000641513 UMODL1-AS1Q8N2C9 162 aa9.03□□□□□ -0.96
PHGDH-219ENST00000641513 WBP2Q969T9 261 aa9.03□□□□□ -0.96
PHGDH-219ENST00000641513 AZIN2Q96A70 460 aa9.03□□□□□ -0.96
PHGDH-219ENST00000641513 PABPC5Q96DU9 382 aaKnown RBP9.03□□□□□ -0.96
PHGDH-219ENST00000641513 MRRFQ96E11 262 aaKnown RBP9.03□□□□□ -0.96
PHGDH-219ENST00000641513 MYEOVQ96EZ4 313 aa9.03□□□□□ -0.96
PHGDH-219ENST00000641513 ABHD8Q96I13 439 aa9.03□□□□□ -0.96
PHGDH-219ENST00000641513 MAGEB18Q96M61 343 aa9.03□□□□□ -0.96
PHGDH-219ENST00000641513 TSGA13Q96PP4 275 aa9.03□□□□□ -0.96
PHGDH-219ENST00000641513 SPON2Q9BUD6 331 aa9.03□□□□□ -0.96
PHGDH-219ENST00000641513 GBA3Q9H227 469 aa9.03□□□□□ -0.96
PHGDH-219ENST00000641513 NKX2-4Q9H2Z4 354 aa9.03□□□□□ -0.96
PHGDH-219ENST00000641513 XAB2Q9HCS7 855 aaKnown RBP9.03□□□□□ -0.96
PHGDH-219ENST00000641513 RBM22Q9NW64 420 aaKnown RBP eCLIP9.03□□□□□ -0.96
PHGDH-219ENST00000641513 PIH1D1Q9NWS0 290 aaKnown RBP9.03□□□□□ -0.96
PHGDH-219ENST00000641513 IGSF9Q9P2J2 1179 aa9.03□□□□□ -0.96
PHGDH-219ENST00000641513 MSRAQ9UJ68 235 aa9.03□□□□□ -0.96
PHGDH-219ENST00000641513 AGO1Q9UL18 857 aaKnown RBP9.03□□□□□ -0.96
PHGDH-219ENST00000641513 SLC12A4Q9UP95 1085 aa9.03□□□□□ -0.96
PHGDH-219ENST00000641513 YBX2Q9Y2T7 364 aaKnown RBP9.03□□□□□ -0.96
PHGDH-219ENST00000641513 CAPN7Q9Y6W3 813 aa9.03□□□□□ -0.96
PHGDH-219ENST00000641513 MYO9BQ13459 2157 aa9.02□□□□□ -0.97
PHGDH-219ENST00000641513 TMEM120BA0PK00 339 aa9.02□□□□□ -0.97
PHGDH-219ENST00000641513 H0YHG0 523 aa9.02□□□□□ -0.97
PHGDH-219ENST00000641513 J3KR12 359 aa9.02□□□□□ -0.97
PHGDH-219ENST00000641513 PSMD3O43242 534 aa9.02□□□□□ -0.97
PHGDH-219ENST00000641513 MAFKO60675 156 aa9.02□□□□□ -0.97
PHGDH-219ENST00000641513 TBL1XO60907 577 aa9.02□□□□□ -0.97
PHGDH-219ENST00000641513 XYLBO75191 536 aa9.02□□□□□ -0.97
PHGDH-219ENST00000641513 SUN1O94901 812 aa9.02□□□□□ -0.97
PHGDH-219ENST00000641513 FGF19O95750 216 aa9.02□□□□□ -0.97
PHGDH-219ENST00000641513 RHOCP08134 193 aa9.02□□□□□ -0.97
PHGDH-219ENST00000641513 ACVRL1P37023 503 aa9.02□□□□□ -0.97
PHGDH-219ENST00000641513 ETFBP38117 255 aa9.02□□□□□ -0.97
PHGDH-219ENST00000641513 PBX2P40425 430 aa9.02□□□□□ -0.97
PHGDH-219ENST00000641513 SKIV2L2P42285 1042 aaKnown RBP9.02□□□□□ -0.97
PHGDH-219ENST00000641513 MAGEA6P43360 314 aa9.02□□□□□ -0.97
PHGDH-219ENST00000641513 CDH4P55283 916 aa9.02□□□□□ -0.97
PHGDH-219ENST00000641513 YBEYP58557 167 aaPredicted RBP9.02□□□□□ -0.97
PHGDH-219ENST00000641513 ERVK-21P61565 698 aa9.02□□□□□ -0.97
PHGDH-219ENST00000641513 CDK16Q00536 496 aa9.02□□□□□ -0.97
PHGDH-219ENST00000641513 RIPK1Q13546 671 aa9.02□□□□□ -0.97
PHGDH-219ENST00000641513 PARP15Q460N3 678 aa9.02□□□□□ -0.97
PHGDH-219ENST00000641513 STXBP5Q5T5C0 1151 aa9.02□□□□□ -0.97
PHGDH-219ENST00000641513 RNF187Q5TA31 235 aaPredicted RBP9.02□□□□□ -0.97
PHGDH-219ENST00000641513 AFMIDQ63HM1 303 aa9.02□□□□□ -0.97
PHGDH-219ENST00000641513 PDE12Q6L8Q7 609 aaKnown RBP9.02□□□□□ -0.97
PHGDH-219ENST00000641513 C3orf62Q6ZUJ4 267 aa9.02□□□□□ -0.97
PHGDH-219ENST00000641513 CAND1Q86VP6 1230 aaKnown RBP9.02□□□□□ -0.97
PHGDH-219ENST00000641513 CARNMT1Q8N4J0 409 aa9.02□□□□□ -0.97
PHGDH-219ENST00000641513 DNAAF3Q8N9W5 541 aa9.02□□□□□ -0.97
PHGDH-219ENST00000641513 MDM1Q8TC05 714 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms