RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, human

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-231	ENST00000640499	SPACA7	Q96KW9	195 aa		27.27	■■□□□ 1.96
VEGFA-231	ENST00000640499	PARD6A	Q9NPB6	346 aa		27.27	■■□□□ 1.96
VEGFA-231	ENST00000640499	ETNK2	Q9NVF9	386 aa		27.27	■■□□□ 1.96
VEGFA-231	ENST00000640499	WSB2	Q9NYS7	404 aa	Predicted RBP	27.27	■■□□□ 1.96
VEGFA-231	ENST00000640499	CEP192	Q8TEP8	1941 aa		27.27	■■□□□ 1.96
VEGFA-231	ENST00000640499	GVINP1	Q7Z2Y8	2422 aa		27.26	■■□□□ 1.95
VEGFA-231	ENST00000640499	TNRC6B	Q9UPQ9	1833 aa	Known RBP	27.26	■■□□□ 1.95
VEGFA-231	ENST00000640499	RNF103	O00237	685 aa		27.26	■■□□□ 1.95
VEGFA-231	ENST00000640499	RET	P07949	1114 aa		27.26	■■□□□ 1.95
VEGFA-231	ENST00000640499	AMPD1	P23109	780 aa		27.26	■■□□□ 1.95
VEGFA-231	ENST00000640499	ETFB	P38117	255 aa		27.26	■■□□□ 1.95
VEGFA-231	ENST00000640499	PTGER3	P43115	390 aa		27.26	■■□□□ 1.95
VEGFA-231	ENST00000640499	METAP1	P53582	386 aa		27.26	■■□□□ 1.95
VEGFA-231	ENST00000640499	YBEY	P58557	167 aa	Predicted RBP	27.26	■■□□□ 1.95
VEGFA-231	ENST00000640499	ZNF776	Q68DI1	518 aa	Predicted RBP	27.26	■■□□□ 1.95
VEGFA-231	ENST00000640499	RETSAT	Q6NUM9	610 aa		27.26	■■□□□ 1.95
VEGFA-231	ENST00000640499	LEKR1	Q6ZMV7	388 aa		27.26	■■□□□ 1.95
VEGFA-231	ENST00000640499	OR2A12	Q8NGT7	310 aa		27.26	■■□□□ 1.95
VEGFA-231	ENST00000640499	VOPP1	Q96AW1	172 aa		27.26	■■□□□ 1.95
VEGFA-231	ENST00000640499	CELF6	Q96J87	481 aa	Known RBP	27.26	■■□□□ 1.95
VEGFA-231	ENST00000640499	LOXL4	Q96JB6	756 aa		27.26	■■□□□ 1.95
VEGFA-231	ENST00000640499	CSPG4P5	Q96PW8	444 aa		27.26	■■□□□ 1.95
VEGFA-231	ENST00000640499	SLC39A8	Q9C0K1	460 aa		27.26	■■□□□ 1.95
VEGFA-231	ENST00000640499	SALL4	Q9UJQ4	1053 aa		27.26	■■□□□ 1.95
VEGFA-231	ENST00000640499	SARDH	Q9UL12	918 aa		27.26	■■□□□ 1.95
VEGFA-231	ENST00000640499	RHOBTB1	O94844	696 aa		27.25	■■□□□ 1.95
VEGFA-231	ENST00000640499	EPN2	O95208	641 aa		27.25	■■□□□ 1.95
VEGFA-231	ENST00000640499	CD6	P30203	668 aa		27.25	■■□□□ 1.95
VEGFA-231	ENST00000640499	CYLC1	P35663	651 aa	Predicted RBP	27.25	■■□□□ 1.95
VEGFA-231	ENST00000640499	ARHGAP25	P42331	645 aa		27.25	■■□□□ 1.95
VEGFA-231	ENST00000640499	CLCN6	P51797	869 aa		27.25	■■□□□ 1.95
VEGFA-231	ENST00000640499	ZBTB16	Q05516	673 aa		27.25	■■□□□ 1.95
VEGFA-231	ENST00000640499	SLC20A2	Q08357	652 aa		27.25	■■□□□ 1.95
VEGFA-231	ENST00000640499	SERINC3	Q13530	473 aa		27.25	■■□□□ 1.95
VEGFA-231	ENST00000640499	ELAVL3	Q14576	367 aa	Known RBP	27.25	■■□□□ 1.95
VEGFA-231	ENST00000640499	CST6	Q15828	149 aa		27.25	■■□□□ 1.95
VEGFA-231	ENST00000640499	C22orf39	Q6P5X5	142 aa		27.25	■■□□□ 1.95
VEGFA-231	ENST00000640499	C11orf74	Q86VG3	221 aa		27.25	■■□□□ 1.95
VEGFA-231	ENST00000640499	TOE1	Q96GM8	510 aa	Known RBP	27.25	■■□□□ 1.95
VEGFA-231	ENST00000640499	BAG1	Q99933	345 aa	Predicted RBP	27.25	■■□□□ 1.95
VEGFA-231	ENST00000640499	TNKS2	Q9H2K2	1166 aa		27.25	■■□□□ 1.95
VEGFA-231	ENST00000640499	PABPC3	Q9H361	631 aa	Known RBP	27.25	■■□□□ 1.95
VEGFA-231	ENST00000640499	SERGEF	Q9UGK8	458 aa		27.25	■■□□□ 1.95
VEGFA-231	ENST00000640499	FCF1	Q9Y324	198 aa	Known RBP	27.25	■■□□□ 1.95
VEGFA-231	ENST00000640499	PTPRZ1	P23471	2315 aa	Predicted RBP	27.24	■■□□□ 1.95
VEGFA-231	ENST00000640499	CXorf51A	A0A1B0GTR3	108 aa		27.24	■■□□□ 1.95
VEGFA-231	ENST00000640499	MCF2L	O15068	1137 aa		27.24	■■□□□ 1.95
VEGFA-231	ENST00000640499	MID1	O15344	667 aa		27.24	■■□□□ 1.95
VEGFA-231	ENST00000640499	MAP3K13	O43283	966 aa		27.24	■■□□□ 1.95
VEGFA-231	ENST00000640499	CTSL	P07711	333 aa		27.24	■■□□□ 1.95
VEGFA-231	ENST00000640499	SSR1	P43307	286 aa	Known RBP	27.24	■■□□□ 1.95
VEGFA-231	ENST00000640499	ZNF135	P52742	658 aa	Predicted RBP	27.24	■■□□□ 1.95
VEGFA-231	ENST00000640499	NDST2	P52849	883 aa		27.24	■■□□□ 1.95
VEGFA-231	ENST00000640499	HADHB	P55084	474 aa	Known RBP	27.24	■■□□□ 1.95
VEGFA-231	ENST00000640499	MMRN1	Q13201	1228 aa		27.24	■■□□□ 1.95
VEGFA-231	ENST00000640499	ELF2	Q15723	593 aa		27.24	■■□□□ 1.95
VEGFA-231	ENST00000640499	PARP15	Q460N3	678 aa		27.24	■■□□□ 1.95
VEGFA-231	ENST00000640499	SLC41A1	Q8IVJ1	513 aa		27.24	■■□□□ 1.95
VEGFA-231	ENST00000640499	AADAT	Q8N5Z0	425 aa		27.24	■■□□□ 1.95
VEGFA-231	ENST00000640499	CHST14	Q8NCH0	376 aa		27.24	■■□□□ 1.95
VEGFA-231	ENST00000640499	NCDN	Q9UBB6	729 aa		27.24	■■□□□ 1.95
VEGFA-231	ENST00000640499	LCMT1	Q9UIC8	334 aa		27.24	■■□□□ 1.95
VEGFA-231	ENST00000640499	PPM1H	Q9ULR3	514 aa		27.24	■■□□□ 1.95
VEGFA-231	ENST00000640499		H3BRJ5	948 aa		27.23	■■□□□ 1.95
VEGFA-231	ENST00000640499	SLC8A1	P32418	973 aa		27.23	■■□□□ 1.95
VEGFA-231	ENST00000640499	SPA17	Q15506	151 aa		27.23	■■□□□ 1.95
VEGFA-231	ENST00000640499	HADH	Q16836	314 aa	Known RBP	27.23	■■□□□ 1.95
VEGFA-231	ENST00000640499	SLC36A4	Q6YBV0	504 aa		27.23	■■□□□ 1.95
VEGFA-231	ENST00000640499	LPCAT2	Q7L5N7	544 aa		27.23	■■□□□ 1.95
VEGFA-231	ENST00000640499	FAM124A	Q86V42	546 aa		27.23	■■□□□ 1.95
VEGFA-231	ENST00000640499	ACRBP	Q8NEB7	543 aa		27.23	■■□□□ 1.95
VEGFA-231	ENST00000640499	ARRDC1-AS1	Q9H2J1	176 aa		27.23	■■□□□ 1.95
VEGFA-231	ENST00000640499	PDF	Q9HBH1	243 aa		27.23	■■□□□ 1.95
VEGFA-231	ENST00000640499	KLHL11	Q9NVR0	708 aa		27.23	■■□□□ 1.95
VEGFA-231	ENST00000640499	HYOU1	Q9Y4L1	999 aa		27.23	■■□□□ 1.95
VEGFA-231	ENST00000640499	GON4L	Q3T8J9	2241 aa		27.22	■■□□□ 1.95
VEGFA-231	ENST00000640499	DAPK3	O43293	454 aa		27.22	■■□□□ 1.95
VEGFA-231	ENST00000640499	DNTT	P04053	509 aa		27.22	■■□□□ 1.95
VEGFA-231	ENST00000640499	ACADM	P11310	421 aa		27.22	■■□□□ 1.95
VEGFA-231	ENST00000640499	ACSL1	P33121	698 aa		27.22	■■□□□ 1.95
VEGFA-231	ENST00000640499	PSMD8	P48556	350 aa		27.22	■■□□□ 1.95
VEGFA-231	ENST00000640499	PAPOLA	P51003	745 aa	Known RBP	27.22	■■□□□ 1.95
VEGFA-231	ENST00000640499	CDH6	P55285	790 aa		27.22	■■□□□ 1.95
VEGFA-231	ENST00000640499	RPL6	Q02878	288 aa	Known RBP	27.22	■■□□□ 1.95
VEGFA-231	ENST00000640499	SPEM2	Q0P670	501 aa		27.22	■■□□□ 1.95
VEGFA-231	ENST00000640499	DPYSL3	Q14195	570 aa		27.22	■■□□□ 1.95
VEGFA-231	ENST00000640499	CCDC6	Q16204	474 aa		27.22	■■□□□ 1.95
VEGFA-231	ENST00000640499	PLA2G2C	Q5R387	149 aa		27.22	■■□□□ 1.95
VEGFA-231	ENST00000640499	ARHGAP36	Q6ZRI8	547 aa		27.22	■■□□□ 1.95
VEGFA-231	ENST00000640499	ZNF419	Q96HQ0	510 aa	Predicted RBP	27.22	■■□□□ 1.95
VEGFA-231	ENST00000640499	CEP44	Q9C0F1	390 aa		27.22	■■□□□ 1.95
VEGFA-231	ENST00000640499	GMEB2	Q9UKD1	530 aa		27.22	■■□□□ 1.95
VEGFA-231	ENST00000640499	DUSP10	Q9Y6W6	482 aa		27.22	■■□□□ 1.95
VEGFA-231	ENST00000640499	BCLAF3	A2AJT9	711 aa	Known RBP	27.21	■■□□□ 1.95
VEGFA-231	ENST00000640499		J3KR12	359 aa		27.21	■■□□□ 1.95
VEGFA-231	ENST00000640499	BNIP3L	O60238	219 aa		27.21	■■□□□ 1.95
VEGFA-231	ENST00000640499	OXTR	P30559	389 aa		27.21	■■□□□ 1.95
VEGFA-231	ENST00000640499	DRD3	P35462	400 aa		27.21	■■□□□ 1.95
VEGFA-231	ENST00000640499	GJC1	P36383	396 aa		27.21	■■□□□ 1.95
VEGFA-231	ENST00000640499	ARL4A	P40617	200 aa		27.21	■■□□□ 1.95

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