RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 WDR5P61964 334 aaKnown RBP15.38■□□□□ 0.05
TRIM3-215ENST00000639856 EFEMP1Q12805 493 aa15.38■□□□□ 0.05
TRIM3-215ENST00000639856 SLC8B1Q6J4K2 584 aa15.38■□□□□ 0.05
TRIM3-215ENST00000639856 CES3Q6UWW8 571 aa15.38■□□□□ 0.05
TRIM3-215ENST00000639856 TMEM135Q86UB9 458 aa15.38■□□□□ 0.05
TRIM3-215ENST00000639856 RASSF3Q86WH2 238 aa15.38■□□□□ 0.05
TRIM3-215ENST00000639856 DNAAF3Q8N9W5 541 aa15.38■□□□□ 0.05
TRIM3-215ENST00000639856 UTP4Q969X6 686 aaKnown RBP15.38■□□□□ 0.05
TRIM3-215ENST00000639856 SKA1Q96BD8 255 aa15.38■□□□□ 0.05
TRIM3-215ENST00000639856 FCRL2Q96LA5 508 aaPredicted RBP15.38■□□□□ 0.05
TRIM3-215ENST00000639856 TEKT5Q96M29 485 aa15.38■□□□□ 0.05
TRIM3-215ENST00000639856 SERPINB11Q96P15 392 aa15.38■□□□□ 0.05
TRIM3-215ENST00000639856 FCRL3Q96P31 734 aaPredicted RBP15.38■□□□□ 0.05
TRIM3-215ENST00000639856 TXNDC16Q9P2K2 825 aa15.38■□□□□ 0.05
TRIM3-215ENST00000639856 PTPRSQ13332 1948 aa15.38■□□□□ 0.05
TRIM3-215ENST00000639856 KCNU1A8MYU2 1149 aa15.38■□□□□ 0.05
TRIM3-215ENST00000639856 HNRNPCL1O60812 293 aaKnown RBP15.38■□□□□ 0.05
TRIM3-215ENST00000639856 DNAJC6O75061 913 aa15.38■□□□□ 0.05
TRIM3-215ENST00000639856 GLRA3O75311 464 aa15.38■□□□□ 0.05
TRIM3-215ENST00000639856 NFKB1P19838 968 aa15.38■□□□□ 0.05
TRIM3-215ENST00000639856 GP5P40197 560 aa15.38■□□□□ 0.05
TRIM3-215ENST00000639856 OCRLQ01968 901 aa15.38■□□□□ 0.05
TRIM3-215ENST00000639856 ZNF33AQ06730 810 aa15.38■□□□□ 0.05
TRIM3-215ENST00000639856 PDE1CQ14123 709 aaPredicted RBP15.38■□□□□ 0.05
TRIM3-215ENST00000639856 DBN1Q16643 649 aa15.38■□□□□ 0.05
TRIM3-215ENST00000639856 CES4AQ5XG92 561 aa15.38■□□□□ 0.05
TRIM3-215ENST00000639856 KIAA1841Q6NSI8 718 aa15.38■□□□□ 0.05
TRIM3-215ENST00000639856 MSANTD2Q6P1R3 559 aa15.38■□□□□ 0.05
TRIM3-215ENST00000639856 ZSCAN18Q8TBC5 510 aaPredicted RBP15.38■□□□□ 0.05
TRIM3-215ENST00000639856 ATP2A3Q93084 1043 aa15.38■□□□□ 0.05
TRIM3-215ENST00000639856 SPATA17Q96L03 361 aa15.38■□□□□ 0.05
TRIM3-215ENST00000639856 HAPLN3Q96S86 360 aa15.38■□□□□ 0.05
TRIM3-215ENST00000639856 CPNE1Q99829 537 aa15.38■□□□□ 0.05
TRIM3-215ENST00000639856 MLPHQ9BV36 600 aaPredicted RBP15.38■□□□□ 0.05
TRIM3-215ENST00000639856 IL1RAPL1Q9NZN1 696 aa15.38■□□□□ 0.05
TRIM3-215ENST00000639856 LNPEPQ9UIQ6 1025 aa15.38■□□□□ 0.05
TRIM3-215ENST00000639856 MAGED2Q9UNF1 606 aaPredicted RBP15.38■□□□□ 0.05
TRIM3-215ENST00000639856 ARHGAP42A6NI28 874 aa15.37■□□□□ 0.05
TRIM3-215ENST00000639856 USP1O94782 785 aa15.37■□□□□ 0.05
TRIM3-215ENST00000639856 RTN3O95197 1032 aaPredicted RBP15.37■□□□□ 0.05
TRIM3-215ENST00000639856 MYL2P10916 166 aa15.37■□□□□ 0.05
TRIM3-215ENST00000639856 SERPINB3P29508 390 aa15.37■□□□□ 0.05
TRIM3-215ENST00000639856 PPP2R5DQ14738 602 aa15.37■□□□□ 0.05
TRIM3-215ENST00000639856 CCDC91Q7Z6B0 441 aa15.37■□□□□ 0.05
TRIM3-215ENST00000639856 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.37■□□□□ 0.05
TRIM3-215ENST00000639856 ZNF669Q96BR6 464 aaPredicted RBP15.37■□□□□ 0.05
TRIM3-215ENST00000639856 CLSTN3Q9BQT9 956 aa15.37■□□□□ 0.05
TRIM3-215ENST00000639856 DCDC2Q9UHG0 476 aa15.37■□□□□ 0.05
TRIM3-215ENST00000639856 HS3ST4Q9Y661 456 aa15.37■□□□□ 0.05
TRIM3-215ENST00000639856 CCDC195A0A1B0GUA6 201 aa15.37■□□□□ 0.05
TRIM3-215ENST00000639856 FAM237BA0A1B0GVD1 139 aa15.37■□□□□ 0.05
TRIM3-215ENST00000639856 A8MUI8 341 aa15.37■□□□□ 0.05
TRIM3-215ENST00000639856 SNNO75324 88 aaPredicted RBP15.37■□□□□ 0.05
TRIM3-215ENST00000639856 HAUS5O94927 633 aa15.37■□□□□ 0.05
TRIM3-215ENST00000639856 JCHAINP01591 159 aa15.37■□□□□ 0.05
TRIM3-215ENST00000639856 RAG1P15918 1043 aa15.37■□□□□ 0.05
TRIM3-215ENST00000639856 COG7P83436 770 aa15.37■□□□□ 0.05
TRIM3-215ENST00000639856 PDE1BQ01064 536 aa15.37■□□□□ 0.05
TRIM3-215ENST00000639856 SMARCB1Q12824 385 aa15.37■□□□□ 0.05
TRIM3-215ENST00000639856 FRG1Q14331 258 aaKnown RBP15.37■□□□□ 0.05
TRIM3-215ENST00000639856 GRTP1Q5TC63 336 aa15.37■□□□□ 0.05
TRIM3-215ENST00000639856 PIK3R6Q5UE93 754 aa15.37■□□□□ 0.05
TRIM3-215ENST00000639856 MANEALQ5VSG8 457 aa15.37■□□□□ 0.05
TRIM3-215ENST00000639856 C14orf80Q86SX3 495 aa15.37■□□□□ 0.05
TRIM3-215ENST00000639856 MIB1Q86YT6 1006 aa15.37■□□□□ 0.05
TRIM3-215ENST00000639856 SLC39A11Q8N1S5 342 aa15.37■□□□□ 0.05
TRIM3-215ENST00000639856 ARHGAP18Q8N392 663 aa15.37■□□□□ 0.05
TRIM3-215ENST00000639856 SLC39A13Q96H72 371 aa15.37■□□□□ 0.05
TRIM3-215ENST00000639856 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.37■□□□□ 0.05
TRIM3-215ENST00000639856 KCNK4Q9NYG8 393 aa15.37■□□□□ 0.05
TRIM3-215ENST00000639856 EMCNQ9ULC0 261 aa15.37■□□□□ 0.05
TRIM3-215ENST00000639856 TLR6Q9Y2C9 796 aa15.37■□□□□ 0.05
TRIM3-215ENST00000639856 ZCWPW2A0A1B0GU75 182 aa15.36■□□□□ 0.05
TRIM3-215ENST00000639856 MAGEB16A2A368 324 aa15.36■□□□□ 0.05
TRIM3-215ENST00000639856 SLC38A8A6NNN8 435 aa15.36■□□□□ 0.05
TRIM3-215ENST00000639856 SEC24AO95486 1093 aa15.36■□□□□ 0.05
TRIM3-215ENST00000639856 GSRP00390 522 aa15.36■□□□□ 0.05
TRIM3-215ENST00000639856 NPY2RP49146 381 aa15.36■□□□□ 0.05
TRIM3-215ENST00000639856 TBX4P57082 545 aa15.36■□□□□ 0.05
TRIM3-215ENST00000639856 ZBTB16Q05516 673 aa15.36■□□□□ 0.05
TRIM3-215ENST00000639856 BTG3Q14201 252 aaPredicted RBP15.36■□□□□ 0.05
TRIM3-215ENST00000639856 OTOP2Q7RTS6 562 aa15.36■□□□□ 0.05
TRIM3-215ENST00000639856 C2orf15Q8WU43 125 aaKnown RBP15.36■□□□□ 0.05
TRIM3-215ENST00000639856 ZNF558Q96NG5 402 aa15.36■□□□□ 0.05
TRIM3-215ENST00000639856 TSGA13Q96PP4 275 aa15.36■□□□□ 0.05
TRIM3-215ENST00000639856 TUBB6Q9BUF5 446 aa15.36■□□□□ 0.05
TRIM3-215ENST00000639856 TBC1D10AQ9BXI6 508 aa15.36■□□□□ 0.05
TRIM3-215ENST00000639856 CCSER2Q9H7U1 834 aa15.36■□□□□ 0.05
TRIM3-215ENST00000639856 TLR8Q9NR97 1041 aaKnown RBP15.36■□□□□ 0.05
TRIM3-215ENST00000639856 FBXO6Q9NRD1 293 aaPredicted RBP15.36■□□□□ 0.05
TRIM3-215ENST00000639856 NDFIP2Q9NV92 336 aa15.36■□□□□ 0.05
TRIM3-215ENST00000639856 MPP6Q9NZW5 540 aa15.36■□□□□ 0.05
TRIM3-215ENST00000639856 BACE2Q9Y5Z0 518 aa15.36■□□□□ 0.05
TRIM3-215ENST00000639856 KIAA1671Q9BY89 1806 aa15.36■□□□□ 0.05
TRIM3-215ENST00000639856 KIAA0355O15063 1070 aa15.35■□□□□ 0.05
TRIM3-215ENST00000639856 SOD2P04179 222 aa15.35■□□□□ 0.05
TRIM3-215ENST00000639856 CCNCP24863 283 aa15.35■□□□□ 0.05
TRIM3-215ENST00000639856 PTPN4P29074 926 aa15.35■□□□□ 0.05
TRIM3-215ENST00000639856 HTR7P34969 479 aa15.35■□□□□ 0.05
TRIM3-215ENST00000639856 RPL10AP62906 217 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms