RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 SFMBT2Q5VUG0 894 aa17.14■□□□□ 0.33
CACNA1A-259ENST00000638114 FAM72DQ6L9T8 149 aa17.14■□□□□ 0.33
CACNA1A-259ENST00000638114 RETSATQ6NUM9 610 aa17.14■□□□□ 0.33
CACNA1A-259ENST00000638114 PPP1R2P3Q6NXS1 205 aa17.14■□□□□ 0.33
CACNA1A-259ENST00000638114 C22orf39Q6P5X5 142 aa17.14■□□□□ 0.33
CACNA1A-259ENST00000638114 SLFN11Q7Z7L1 901 aa17.14■□□□□ 0.33
CACNA1A-259ENST00000638114 FAM72BQ86X60 149 aa17.14■□□□□ 0.33
CACNA1A-259ENST00000638114 NTAN1Q96AB6 310 aa17.14■□□□□ 0.33
CACNA1A-259ENST00000638114 TBC1D31Q96DN5 1066 aa17.14■□□□□ 0.33
CACNA1A-259ENST00000638114 ORAI3Q9BRQ5 295 aa17.14■□□□□ 0.33
CACNA1A-259ENST00000638114 MAGEB5Q9BZ81 275 aa17.14■□□□□ 0.33
CACNA1A-259ENST00000638114 HAUS4Q9H6D7 363 aa17.14■□□□□ 0.33
CACNA1A-259ENST00000638114 DNAI1Q9UI46 699 aa17.14■□□□□ 0.33
CACNA1A-259ENST00000638114 ANGPTL2Q9UKU9 493 aa17.14■□□□□ 0.33
CACNA1A-259ENST00000638114 PPM1HQ9ULR3 514 aa17.14■□□□□ 0.33
CACNA1A-259ENST00000638114 KNL1Q8NG31 2342 aa17.14■□□□□ 0.33
CACNA1A-259ENST00000638114 PLXNA2O75051 1894 aa17.14■□□□□ 0.33
CACNA1A-259ENST00000638114 TBC1D3DA0A087WVF3 549 aa17.13■□□□□ 0.33
CACNA1A-259ENST00000638114 TBC1D3IA0A087WXS9 549 aa17.13■□□□□ 0.33
CACNA1A-259ENST00000638114 TBC1D3EA0A087X179 549 aa17.13■□□□□ 0.33
CACNA1A-259ENST00000638114 TBC1D3KA0A087X1G2 549 aa17.13■□□□□ 0.33
CACNA1A-259ENST00000638114 SPAARA0A1B0GVQ0 90 aa17.13■□□□□ 0.33
CACNA1A-259ENST00000638114 A0A1W2PPC4 97 aa17.13■□□□□ 0.33
CACNA1A-259ENST00000638114 TBC1D3FA6NER0 549 aaPredicted RBP17.13■□□□□ 0.33
CACNA1A-259ENST00000638114 PCNX2A6NKB5 2137 aa17.13■□□□□ 0.33
CACNA1A-259ENST00000638114 TBC1D3LB9A6J9 549 aa17.13■□□□□ 0.33
CACNA1A-259ENST00000638114 SH3BP5O60239 455 aa17.13■□□□□ 0.33
CACNA1A-259ENST00000638114 RTN2O75298 545 aa17.13■□□□□ 0.33
CACNA1A-259ENST00000638114 TBC1D3HP0C7X1 549 aa17.13■□□□□ 0.33
CACNA1A-259ENST00000638114 DESP17661 470 aa17.13■□□□□ 0.33
CACNA1A-259ENST00000638114 PTMSP20962 102 aa17.13■□□□□ 0.33
CACNA1A-259ENST00000638114 ETFBP38117 255 aa17.13■□□□□ 0.33
CACNA1A-259ENST00000638114 RECQLP46063 649 aaPredicted RBP17.13■□□□□ 0.33
CACNA1A-259ENST00000638114 MAPKAPK2P49137 400 aa17.13■□□□□ 0.33
CACNA1A-259ENST00000638114 CCR5P51681 352 aa17.13■□□□□ 0.33
CACNA1A-259ENST00000638114 FOXC1Q12948 553 aa17.13■□□□□ 0.33
CACNA1A-259ENST00000638114 NR1I3Q14994 352 aa17.13■□□□□ 0.33
CACNA1A-259ENST00000638114 KIF19Q2TAC6 998 aa17.13■□□□□ 0.33
CACNA1A-259ENST00000638114 EFHC2Q5JST6 749 aa17.13■□□□□ 0.33
CACNA1A-259ENST00000638114 PPP1R15BQ5SWA1 713 aa17.13■□□□□ 0.33
CACNA1A-259ENST00000638114 E4F1Q66K89 784 aaPredicted RBP17.13■□□□□ 0.33
CACNA1A-259ENST00000638114 TBC1D3GQ6DHY5 549 aa17.13■□□□□ 0.33
CACNA1A-259ENST00000638114 TBC1D3CQ6IPX1 549 aa17.13■□□□□ 0.33
CACNA1A-259ENST00000638114 TBC1D3Q8IZP1 549 aaPredicted RBP17.13■□□□□ 0.33
CACNA1A-259ENST00000638114 OR2A12Q8NGT7 310 aa17.13■□□□□ 0.33
CACNA1A-259ENST00000638114 VCPIP1Q96JH7 1222 aa17.13■□□□□ 0.33
CACNA1A-259ENST00000638114 SLC6A18Q96N87 628 aa17.13■□□□□ 0.33
CACNA1A-259ENST00000638114 CNTNAP3BQ96NU0 1288 aa17.13■□□□□ 0.33
CACNA1A-259ENST00000638114 CNPY3Q9BT09 278 aa17.13■□□□□ 0.33
CACNA1A-259ENST00000638114 CNTNAP3Q9BZ76 1288 aa17.13■□□□□ 0.33
CACNA1A-259ENST00000638114 TNKS2Q9H2K2 1166 aa17.13■□□□□ 0.33
CACNA1A-259ENST00000638114 NDFIP2Q9NV92 336 aa17.13■□□□□ 0.33
CACNA1A-259ENST00000638114 TMEM248Q9NWD8 314 aa17.13■□□□□ 0.33
CACNA1A-259ENST00000638114 AIPL1Q9NZN9 384 aa17.13■□□□□ 0.33
CACNA1A-259ENST00000638114 ANKRD6Q9Y2G4 727 aa17.13■□□□□ 0.33
CACNA1A-259ENST00000638114 FNDC3AQ9Y2H6 1198 aaKnown RBP17.13■□□□□ 0.33
CACNA1A-259ENST00000638114 SNX11Q9Y5W9 270 aa17.13■□□□□ 0.33
CACNA1A-259ENST00000638114 ACACBO00763 2458 aa17.13■□□□□ 0.33
CACNA1A-259ENST00000638114 CHD8Q9HCK8 2581 aa17.12■□□□□ 0.33
CACNA1A-259ENST00000638114 GOLGA6L19H0YKK7 550 aa17.12■□□□□ 0.33
CACNA1A-259ENST00000638114 KPNA3O00505 521 aaPredicted RBP17.12■□□□□ 0.33
CACNA1A-259ENST00000638114 SLC7A4O43246 635 aa17.12■□□□□ 0.33
CACNA1A-259ENST00000638114 ATMINO43313 823 aaPredicted RBP17.12■□□□□ 0.33
CACNA1A-259ENST00000638114 ZMPSTE24O75844 475 aa17.12■□□□□ 0.33
CACNA1A-259ENST00000638114 CTSLP07711 333 aa17.12■□□□□ 0.33
CACNA1A-259ENST00000638114 CHRNA3P32297 505 aa17.12■□□□□ 0.33
CACNA1A-259ENST00000638114 ACVRL1P37023 503 aa17.12■□□□□ 0.33
CACNA1A-259ENST00000638114 SERPINH1P50454 418 aaKnown RBP17.12■□□□□ 0.33
CACNA1A-259ENST00000638114 C21orf59P57076 290 aa17.12■□□□□ 0.33
CACNA1A-259ENST00000638114 PPP2CBP62714 309 aa17.12■□□□□ 0.33
CACNA1A-259ENST00000638114 RACK1P63244 317 aaKnown RBP17.12■□□□□ 0.33
CACNA1A-259ENST00000638114 PPP2CAP67775 309 aa17.12■□□□□ 0.33
CACNA1A-259ENST00000638114 SIM1P81133 766 aaPredicted RBP17.12■□□□□ 0.33
CACNA1A-259ENST00000638114 FANCCQ00597 558 aa17.12■□□□□ 0.33
CACNA1A-259ENST00000638114 SLC20A2Q08357 652 aa17.12■□□□□ 0.33
CACNA1A-259ENST00000638114 KLHL30Q0D2K2 578 aa17.12■□□□□ 0.33
CACNA1A-259ENST00000638114 SCAPQ12770 1279 aa17.12■□□□□ 0.33
CACNA1A-259ENST00000638114 CNTN1Q12860 1018 aa17.12■□□□□ 0.33
CACNA1A-259ENST00000638114 ZNF571Q7Z3V5 609 aaPredicted RBP17.12■□□□□ 0.33
CACNA1A-259ENST00000638114 NLRP14Q86W24 1093 aa17.12■□□□□ 0.33
CACNA1A-259ENST00000638114 NAXDQ8IW45 347 aa17.12■□□□□ 0.33
CACNA1A-259ENST00000638114 PYROXD2Q8N2H3 581 aa17.12■□□□□ 0.33
CACNA1A-259ENST00000638114 CHST14Q8NCH0 376 aa17.12■□□□□ 0.33
CACNA1A-259ENST00000638114 CAMK1GQ96NX5 476 aa17.12■□□□□ 0.33
CACNA1A-259ENST00000638114 TTYH3Q9C0H2 523 aa17.12■□□□□ 0.33
CACNA1A-259ENST00000638114 RETREG1Q9H6L5 497 aa17.12■□□□□ 0.33
CACNA1A-259ENST00000638114 EBF2Q9HAK2 575 aa17.12■□□□□ 0.33
CACNA1A-259ENST00000638114 AASDHPPTQ9NRN7 309 aa17.12■□□□□ 0.33
CACNA1A-259ENST00000638114 TM7SF3Q9NS93 570 aa17.12■□□□□ 0.33
CACNA1A-259ENST00000638114 NEU3Q9UQ49 428 aa17.12■□□□□ 0.33
CACNA1A-259ENST00000638114 PLRG1O43660 514 aaKnown RBP17.11■□□□□ 0.33
CACNA1A-259ENST00000638114 PRNPP04156 253 aa17.11■□□□□ 0.33
CACNA1A-259ENST00000638114 PRKCIP41743 596 aa17.11■□□□□ 0.33
CACNA1A-259ENST00000638114 DNA2P51530 1060 aa17.11■□□□□ 0.33
CACNA1A-259ENST00000638114 ARF5P84085 180 aa17.11■□□□□ 0.33
CACNA1A-259ENST00000638114 MAMLD1Q13495 774 aa17.11■□□□□ 0.33
CACNA1A-259ENST00000638114 AGBL4Q5VU57 503 aa17.11■□□□□ 0.33
CACNA1A-259ENST00000638114 TMC6Q7Z403 805 aa17.11■□□□□ 0.33
CACNA1A-259ENST00000638114 DNAAF5Q86Y56 855 aa17.11■□□□□ 0.33
CACNA1A-259ENST00000638114 GRIN3AQ8TCU5 1115 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms