RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 NYNRINQ9P2P1 1898 aaKnown RBP4.06□□□□□ -1.76
SCN1A-214ENST00000637038 SLC7A8Q9UHI5 535 aa4.06□□□□□ -1.76
SCN1A-214ENST00000637038 UBQLN1Q9UMX0 589 aaKnown RBP4.06□□□□□ -1.76
SCN1A-214ENST00000637038 PSMD13Q9UNM6 376 aa4.06□□□□□ -1.76
SCN1A-214ENST00000637038 PCDHB12Q9Y5F1 795 aa4.06□□□□□ -1.76
SCN1A-214ENST00000637038 SNX9Q9Y5X1 595 aa4.06□□□□□ -1.76
SCN1A-214ENST00000637038 RNF103O00237 685 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 EEF2KO00418 725 aaKnown RBP4.05□□□□□ -1.76
SCN1A-214ENST00000637038 CASQ2O14958 399 aaPredicted RBP4.05□□□□□ -1.76
SCN1A-214ENST00000637038 SH3BP5O60239 455 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 SIN3BO75182 1162 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 GRAP2O75791 330 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 FBXO21O94952 628 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 C6orf222P0C671 652 aaPredicted RBP4.05□□□□□ -1.76
SCN1A-214ENST00000637038 ZCCHC18P0CG32 403 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 CSH1P0DML2 217 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 CSH2P0DML3 217 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 TXNP10599 105 aaKnown RBP4.05□□□□□ -1.76
SCN1A-214ENST00000637038 AMPD1P23109 780 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 STX1BP61266 288 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 ESRRGP62508 458 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 GAD2Q05329 585 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 MBTD1Q05BQ5 628 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 CYLC2Q14093 348 aaPredicted RBP4.05□□□□□ -1.76
SCN1A-214ENST00000637038 HERC3Q15034 1050 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 SLC5A9Q2M3M2 681 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 C15orf59Q2T9L4 293 aaPredicted RBP4.05□□□□□ -1.76
SCN1A-214ENST00000637038 SV2CQ496J9 727 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 SYCP2LQ5T4T6 812 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 ARTNQ5T4W7 220 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 THEMIS2Q5TEJ8 643 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 ARHGAP17Q68EM7 881 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 NAPEPLDQ6IQ20 393 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 PID1Q7Z2X4 250 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 ARHGAP22Q7Z5H3 698 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 IGDCC3Q8IVU1 814 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 TDRD5Q8NAT2 981 aaKnown RBP4.05□□□□□ -1.76
SCN1A-214ENST00000637038 RP9Q8TA86 221 aaKnown RBP4.05□□□□□ -1.76
SCN1A-214ENST00000637038 PCDH19Q8TAB3 1148 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 ZNF669Q96BR6 464 aaPredicted RBP4.05□□□□□ -1.76
SCN1A-214ENST00000637038 CCDC126Q96EE4 140 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 CERS2Q96G23 380 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 HIC2Q96JB3 615 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 MS4A4AQ96JQ5 239 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 GORASP1Q9BQQ3 440 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 SLC4A5Q9BY07 1137 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 MRPS26Q9BYN8 205 aaKnown RBP4.05□□□□□ -1.76
SCN1A-214ENST00000637038 DRC3Q9H069 523 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 SPATC1LQ9H0A9 340 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 CDH19Q9H159 772 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 SLC32A1Q9H598 525 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 EML4Q9HC35 981 aaKnown RBP4.05□□□□□ -1.76
SCN1A-214ENST00000637038 COPG2Q9UBF2 871 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 IPO11Q9UI26 975 aaKnown RBP4.05□□□□□ -1.76
SCN1A-214ENST00000637038 CDH22Q9UJ99 828 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 RAB26Q9ULW5 256 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 TBC1D30Q9Y2I9 924 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 Q9Y3F1 56 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 WASF2Q9Y6W5 498 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 RGSL1A5PLK6 1076 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 HUS1O60921 280 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 AVILO75366 819 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 GPC4O75487 556 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 PROCP04070 461 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 AVPR2P30518 371 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 SERPINB5P36952 375 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 GRM5P41594 1212 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 RPL5P46777 297 aaKnown RBP4.05□□□□□ -1.76
SCN1A-214ENST00000637038 CLCN3P51790 818 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 UBE3AQ05086 875 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 STX5Q13190 355 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 UBAP2LQ14157 1087 aaKnown RBP4.05□□□□□ -1.76
SCN1A-214ENST00000637038 FRG1Q14331 258 aaKnown RBP4.05□□□□□ -1.76
SCN1A-214ENST00000637038 PDK3Q15120 406 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 SH3D19Q5HYK7 790 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 ARMC3Q5W041 872 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 EEF1DP3Q658K8 133 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 MBLAC2Q68D91 279 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 CATSPER4Q7RTX7 472 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 TMEM110Q86TL2 294 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 CAND1Q86VP6 1230 aaKnown RBP4.05□□□□□ -1.76
SCN1A-214ENST00000637038 ADCY4Q8NFM4 1077 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 TRPC4APQ8TEL6 797 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 UCMAQ8WVF2 138 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 STON2Q8WXE9 905 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 GATA6Q92908 595 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 SIGLEC10Q96LC7 697 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 TEPSINQ96N21 525 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 KLHL5Q96PQ7 755 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 PANX3Q96QZ0 392 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 EPAS1Q99814 870 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 MED10Q9BTT4 135 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 MRPL1Q9BYD6 325 aaKnown RBP4.05□□□□□ -1.76
SCN1A-214ENST00000637038 NKX2-4Q9H2Z4 354 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 C12orf65Q9H3J6 166 aaKnown RBP4.05□□□□□ -1.76
SCN1A-214ENST00000637038 EPHX3Q9H6B9 360 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 PFDN4Q9NQP4 134 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 ARHGEF4Q9NR80 690 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 RABL2BQ9UNT1 228 aa4.05□□□□□ -1.76
SCN1A-214ENST00000637038 RAP2CQ9Y3L5 183 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms