RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 RENBPP51606 427 aa18.08■□□□□ 0.49
CACNA1A-227ENST00000636549 FASTKQ14296 549 aaKnown RBP18.08■□□□□ 0.49
CACNA1A-227ENST00000636549 ZC3H12AQ5D1E8 599 aaKnown RBP18.08■□□□□ 0.49
CACNA1A-227ENST00000636549 FAM151BQ6UXP7 276 aa18.08■□□□□ 0.49
CACNA1A-227ENST00000636549 CASKIN2Q8WXE0 1202 aa18.08■□□□□ 0.49
CACNA1A-227ENST00000636549 PRCCQ92733 491 aaPredicted RBP18.08■□□□□ 0.49
CACNA1A-227ENST00000636549 GAL3ST4Q96RP7 486 aa18.08■□□□□ 0.49
CACNA1A-227ENST00000636549 PAFAH2Q99487 392 aa18.08■□□□□ 0.49
CACNA1A-227ENST00000636549 CLEC4MQ9H2X3 399 aaPredicted RBP18.08■□□□□ 0.49
CACNA1A-227ENST00000636549 OPTCQ9UBM4 332 aa18.08■□□□□ 0.49
CACNA1A-227ENST00000636549 GPC6Q9Y625 555 aaPredicted RBP18.08■□□□□ 0.49
CACNA1A-227ENST00000636549 RRM1P23921 792 aa18.08■□□□□ 0.48
CACNA1A-227ENST00000636549 FAM92AA1XBS5 289 aa18.08■□□□□ 0.48
CACNA1A-227ENST00000636549 ZBTB22O15209 634 aa18.08■□□□□ 0.48
CACNA1A-227ENST00000636549 RNASEH2AO75792 299 aaKnown RBP18.08■□□□□ 0.48
CACNA1A-227ENST00000636549 OR7A10O76100 309 aa18.08■□□□□ 0.48
CACNA1A-227ENST00000636549 MFN2O95140 757 aa18.08■□□□□ 0.48
CACNA1A-227ENST00000636549 OR5F1O95221 314 aa18.08■□□□□ 0.48
CACNA1A-227ENST00000636549 PIK3R1P27986 724 aa18.08■□□□□ 0.48
CACNA1A-227ENST00000636549 ARL3P36405 182 aa18.08■□□□□ 0.48
CACNA1A-227ENST00000636549 MMP13P45452 471 aa18.08■□□□□ 0.48
CACNA1A-227ENST00000636549 POU5F1Q01860 360 aaKnown RBP18.08■□□□□ 0.48
CACNA1A-227ENST00000636549 LRRC73Q5JTD7 316 aa18.08■□□□□ 0.48
CACNA1A-227ENST00000636549 POLNQ7Z5Q5 900 aa18.08■□□□□ 0.48
CACNA1A-227ENST00000636549 IGDCC4Q8TDY8 1250 aa18.08■□□□□ 0.48
CACNA1A-227ENST00000636549 TAS1R2Q8TE23 839 aa18.08■□□□□ 0.48
CACNA1A-227ENST00000636549 PSMD13Q9UNM6 376 aa18.08■□□□□ 0.48
CACNA1A-227ENST00000636549 TRIM66O15016 1216 aa18.08■□□□□ 0.48
CACNA1A-227ENST00000636549 NR2F1P10589 423 aa18.08■□□□□ 0.48
CACNA1A-227ENST00000636549 MSX1P28360 303 aa18.08■□□□□ 0.48
CACNA1A-227ENST00000636549 PPIL2Q13356 520 aa18.08■□□□□ 0.48
CACNA1A-227ENST00000636549 DEFB107AQ8IZN7 70 aa18.08■□□□□ 0.48
CACNA1A-227ENST00000636549 PTPN18Q99952 460 aa18.08■□□□□ 0.48
CACNA1A-227ENST00000636549 PRRG3Q9BZD7 231 aa18.08■□□□□ 0.48
CACNA1A-227ENST00000636549 NOS1APO75052 506 aaPredicted RBP18.07■□□□□ 0.48
CACNA1A-227ENST00000636549 KRT6AP02538 564 aa18.07■□□□□ 0.48
CACNA1A-227ENST00000636549 KRT6BP04259 564 aa18.07■□□□□ 0.48
CACNA1A-227ENST00000636549 KRT6CP48668 564 aa18.07■□□□□ 0.48
CACNA1A-227ENST00000636549 CLCC1Q96S66 551 aa18.07■□□□□ 0.48
CACNA1A-227ENST00000636549 CYP4B1P13584 511 aa18.07■□□□□ 0.48
CACNA1A-227ENST00000636549 TMED8Q6PL24 325 aaPredicted RBP18.07■□□□□ 0.48
CACNA1A-227ENST00000636549 ANKFN1Q8N957 763 aa18.07■□□□□ 0.48
CACNA1A-227ENST00000636549 TPCN2Q8NHX9 752 aa18.07■□□□□ 0.48
CACNA1A-227ENST00000636549 C5orf34Q96MH7 638 aa18.07■□□□□ 0.48
CACNA1A-227ENST00000636549 RNF121Q9H920 327 aa18.07■□□□□ 0.48
CACNA1A-227ENST00000636549 KDM6BO15054 1643 aa18.07■□□□□ 0.48
CACNA1A-227ENST00000636549 A0A1W2PQ67 120 aa18.07■□□□□ 0.48
CACNA1A-227ENST00000636549 EPN2O95208 641 aa18.07■□□□□ 0.48
CACNA1A-227ENST00000636549 CCNYL3P0C7X3 344 aa18.07■□□□□ 0.48
CACNA1A-227ENST00000636549 ACRP10323 421 aa18.07■□□□□ 0.48
CACNA1A-227ENST00000636549 HOXA7P31268 230 aaPredicted RBP18.07■□□□□ 0.48
CACNA1A-227ENST00000636549 RIN1Q13671 783 aa18.07■□□□□ 0.48
CACNA1A-227ENST00000636549 SF1Q15637 639 aaKnown RBP18.07■□□□□ 0.48
CACNA1A-227ENST00000636549 USP41Q3LFD5 358 aa18.07■□□□□ 0.48
CACNA1A-227ENST00000636549 MARCH2Q9P0N8 246 aa18.07■□□□□ 0.48
CACNA1A-227ENST00000636549 RGS1Q08116 209 aa18.07■□□□□ 0.48
CACNA1A-227ENST00000636549 KCNMA1Q12791 1236 aa18.07■□□□□ 0.48
CACNA1A-227ENST00000636549 CDH24Q86UP0 819 aa18.07■□□□□ 0.48
CACNA1A-227ENST00000636549 CDK5RAP1Q96SZ6 601 aaKnown RBP18.07■□□□□ 0.48
CACNA1A-227ENST00000636549 EFCAB1Q9HAE3 211 aa18.07■□□□□ 0.48
CACNA1A-227ENST00000636549 ADPRHL2Q9NX46 363 aa18.07■□□□□ 0.48
CACNA1A-227ENST00000636549 EPHB6O15197 1021 aa18.07■□□□□ 0.48
CACNA1A-227ENST00000636549 FSBPO95073 299 aa18.07■□□□□ 0.48
CACNA1A-227ENST00000636549 RARGP13631 454 aa18.07■□□□□ 0.48
CACNA1A-227ENST00000636549 SERPINA4P29622 427 aa18.07■□□□□ 0.48
CACNA1A-227ENST00000636549 CD52P31358 61 aa18.07■□□□□ 0.48
CACNA1A-227ENST00000636549 KIAA0408Q6ZU52 694 aa18.07■□□□□ 0.48
CACNA1A-227ENST00000636549 ANKS1BQ7Z6G8 1248 aa18.07■□□□□ 0.48
CACNA1A-227ENST00000636549 ZNF605Q86T29 641 aa18.07■□□□□ 0.48
CACNA1A-227ENST00000636549 A0A088AWK7 358 aa18.06■□□□□ 0.48
CACNA1A-227ENST00000636549 ZNF10P21506 573 aaPredicted RBP18.06■□□□□ 0.48
CACNA1A-227ENST00000636549 OMPP47874 163 aa18.06■□□□□ 0.48
CACNA1A-227ENST00000636549 IDH2P48735 452 aaKnown RBP18.06■□□□□ 0.48
CACNA1A-227ENST00000636549 PIK3CGP48736 1102 aa18.06■□□□□ 0.48
CACNA1A-227ENST00000636549 PGM5Q15124 567 aa18.06■□□□□ 0.48
CACNA1A-227ENST00000636549 HYIQ5T013 277 aa18.06■□□□□ 0.48
CACNA1A-227ENST00000636549 STK32CQ86UX6 486 aa18.06■□□□□ 0.48
CACNA1A-227ENST00000636549 TTLL2Q9BWV7 592 aa18.06■□□□□ 0.48
CACNA1A-227ENST00000636549 ERVK-9P63128 1117 aa18.06■□□□□ 0.48
CACNA1A-227ENST00000636549 ERVK-24P63145 666 aa18.06■□□□□ 0.48
CACNA1A-227ENST00000636549 ENKURQ8TC29 256 aa18.06■□□□□ 0.48
CACNA1A-227ENST00000636549 SELENOMQ8WWX9 145 aa18.06■□□□□ 0.48
CACNA1A-227ENST00000636549 MCMBPQ9BTE3 642 aa18.06■□□□□ 0.48
CACNA1A-227ENST00000636549 ANKEF1Q9NU02 776 aa18.06■□□□□ 0.48
CACNA1A-227ENST00000636549 TUBGCP4Q9UGJ1 667 aa18.06■□□□□ 0.48
CACNA1A-227ENST00000636549 ACOT9Q9Y305 439 aa18.06■□□□□ 0.48
CACNA1A-227ENST00000636549 CENPXA8MT69 81 aa18.06■□□□□ 0.48
CACNA1A-227ENST00000636549 ZMPSTE24O75844 475 aa18.06■□□□□ 0.48
CACNA1A-227ENST00000636549 FAM98BQ52LJ0 330 aaKnown RBP18.06■□□□□ 0.48
CACNA1A-227ENST00000636549 OR4A15Q8NGL6 344 aa18.06■□□□□ 0.48
CACNA1A-227ENST00000636549 MORC2Q9Y6X9 1032 aaPredicted RBP18.06■□□□□ 0.48
CACNA1A-227ENST00000636549 SLC28A2O43868 658 aa18.06■□□□□ 0.48
CACNA1A-227ENST00000636549 ZBTB11O95625 1053 aaPredicted RBP18.06■□□□□ 0.48
CACNA1A-227ENST00000636549 ETS1P14921 441 aa18.06■□□□□ 0.48
CACNA1A-227ENST00000636549 HTR1BP28222 390 aa18.06■□□□□ 0.48
CACNA1A-227ENST00000636549 PKNOX1P55347 436 aa18.06■□□□□ 0.48
CACNA1A-227ENST00000636549 KCTD21Q4G0X4 260 aa18.06■□□□□ 0.48
CACNA1A-227ENST00000636549 BOLA3Q53S33 107 aa18.06■□□□□ 0.48
CACNA1A-227ENST00000636549 SCUBE1Q8IWY4 988 aa18.06■□□□□ 0.48
CACNA1A-227ENST00000636549 TRPV3Q8NET8 790 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms