RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 BAMBIQ13145 260 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 DLGAP5Q15398 846 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 IL17AQ16552 155 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 TPRXLQ17RH7 258 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 CPEB4Q17RY0 729 aaKnown RBP eCLIP-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 ZNF674Q2M3X9 581 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 SMTNL2Q2TAL5 461 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 CTU2Q2VPK5 515 aaKnown RBP-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 PTCHD3Q3KNS1 767 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 CD300EQ496F6 205 aaPredicted RBP-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 Q5BKY6 102 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 KLF17Q5JT82 389 aaPredicted RBP-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 PIK3CD-AS1Q5SR53 167 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 DNLZQ5SXM8 178 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 C10orf76Q5T2E6 689 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 FAM71E1Q6IPT2 247 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 RGMBQ6NW40 437 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 ZFP2Q6ZN57 461 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 ZNF600Q6ZNG1 722 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 CCDC129Q6ZRS4 1044 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 PAQR9Q6ZVX9 377 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 TMTC3Q6ZXV5 915 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 PPP1R32Q7Z5V6 425 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 SYVN1Q86TM6 617 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 ZNF227Q86WZ6 799 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 DDIASQ8IXT1 998 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 RAVER1Q8IY67 606 aaKnown RBP-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 C16orf71Q8IYS4 520 aaPredicted RBP-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 ADGRF4Q8IZF3 695 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 GPC2Q8N158 579 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 SCML4Q8N228 414 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 PRR18Q8N4B5 295 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 TMEM57Q8N5G2 664 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 STPG4Q8N801 248 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 ZMIZ2Q8NF64 920 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 PIP4K2CQ8TBX8 421 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 DCAF4Q8WV16 495 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 BTN2A2Q8WVV5 523 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 PCNPQ8WW12 178 aaKnown RBP-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 HPSE2Q8WWQ2 592 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 ATRIPQ8WXE1 791 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 TM9SF4Q92544 642 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 GTF3AQ92664 365 aaKnown RBP-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 CENPIQ92674 756 aaPredicted RBP-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 FRAT1Q92837 279 aaPredicted RBP-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 PTPRN2Q92932 1015 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 BRF1Q92994 677 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 GAL3ST3Q96A11 431 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 SLCO4A1Q96BD0 722 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 CYFIP2Q96F07 1278 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 PDLIM5Q96HC4 596 aaKnown RBP-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 GMPPAQ96IJ6 420 aaPredicted RBP-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 SEC16BQ96JE7 1060 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 PRICKLE1Q96MT3 831 aaPredicted RBP-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 WDR92Q96MX6 357 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 ZNF385AQ96PM9 386 aaKnown RBP-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 MED15Q96RN5 788 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 SMC6Q96SB8 1091 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 MMP19Q99542 508 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 SPIN2AQ99865 258 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 HAUS7Q99871 368 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 SEMA3CQ99985 751 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 SPIN2BQ9BPZ2 258 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 NRIP2Q9BQI9 281 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 MAK16Q9BXY0 300 aaKnown RBP-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 LAT2Q9GZY6 243 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 HOXD1Q9GZZ0 328 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 SPNS1Q9H2V7 528 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 NOL6Q9H6R4 1146 aaKnown RBP-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 C10orf88Q9H8K7 445 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 LRRC4Q9HBW1 653 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 CAPN10Q9HC96 672 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 CCDC87Q9NVE4 849 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 FLRT3Q9NZU0 649 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 CLEC1BQ9P126 229 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 HSFX1Q9UBD0 423 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 LRWD1Q9UFC0 647 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 LIMA1Q9UHB6 759 aaKnown RBP-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 SLCO3A1Q9UIG8 710 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 HACL1Q9UJ83 578 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 TSPAN16Q9UKR8 245 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 TRHDEQ9UKU6 1024 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 AGO2Q9UKV8 859 aaKnown RBP-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 INTUQ9ULD6 942 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 MAFFQ9ULX9 164 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 USP18Q9UMW8 372 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 ABCG2Q9UNQ0 655 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 NUB1Q9Y5A7 615 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 UTP18Q9Y5J1 556 aaKnown RBP eCLIP-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 TNPO3Q9Y5L0 923 aaKnown RBP-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 TIMM13Q9Y5L4 95 aaPredicted RBP-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 OR51B4Q9Y5P0 310 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 BACE2Q9Y5Z0 518 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 HCFC1P51610 2035 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 CSMD3Q7Z407 3707 aa-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 MAP1BP46821 2468 aaKnown RBP-0.95□□□□□ -2.56
CDKL5-210ENST00000636046 DISP3Q9P2K9 1392 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 IGKV1D-13A0A0B4J2D9 117 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 ARHGAP10A1A4S6 786 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 RRN3P2A6NIE6 340 aa-0.96□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms