RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 SWAP70Q9UH65 585 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 CNOT7Q9UIV1 285 aaKnown RBP2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 TSPYL4Q9UJ04 414 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 FBXO9Q9UK97 447 aaPredicted RBP2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 SLC13A4Q9UKG4 626 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 PROCRQ9UNN8 238 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 HPSEQ9Y251 543 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 TMEM98Q9Y2Y6 226 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 RRP7AQ9Y3A4 280 aaKnown RBP2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 DMDP11532 3685 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 ALPK3Q96L96 1907 aa2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 MYH13Q9UKX3 1938 aa2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 PHIPQ8WWQ0 1821 aa2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 PRAMEF33A0A0G2JMD5 474 aa2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 CD3EAPO15446 510 aaKnown RBP2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 HOXC11O43248 304 aaPredicted RBP2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 DHHO43323 396 aa2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 DNPH1O43598 174 aa2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 CCNT2O60583 730 aaKnown RBP2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 PRAMEF10O60809 474 aa2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 SUN1O94901 812 aa2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 RASAL1O95294 804 aa2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 VIPP01282 170 aa2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 ANXA6P08133 673 aa2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 ARP10275 920 aa2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 JUPP14923 745 aa2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 CHRM3P20309 590 aa2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 ITGALP20701 1170 aa2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 TNFAIP3P21580 790 aa2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 BDNFP23560 247 aa2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 THBS3P49746 956 aa2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 ANXA11P50995 505 aaKnown RBP2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 PAPOLAP51003 745 aaKnown RBP2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 GEMIN4P57678 1058 aaKnown RBP2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 FKBP1BP68106 108 aa2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 TLE2Q04725 743 aa2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 G3BP1Q13283 466 aaKnown RBP eCLIP2.78□□□□□ -1.968e-6■□□□□ 9
SMARCB1-208ENST00000634926 CCNIQ14094 377 aa2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 E2F2Q14209 437 aa2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 DAZAP2Q15038 168 aaPredicted RBP2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 TRIM60Q495X7 471 aa2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 HYIQ5T013 277 aa2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 ATPAF1Q5TC12 328 aaPredicted RBP2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 ANKRD45Q5TZF3 282 aa2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 CACHD1Q5VU97 1274 aa2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 ABLIM2Q6H8Q1 611 aa2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 RGMBQ6NW40 437 aa2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 TMEM108Q6UXF1 575 aa2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 TMTC1Q8IUR5 882 aa2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 SPARTQ8N0X7 666 aa2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 AGBL3Q8NEM8 1001 aa2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 OR6Y1Q8NGX8 325 aa2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 ABHD5Q8WTS1 349 aa2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 CDCA5Q96FF9 252 aa2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 OSBPL9Q96SU4 736 aa2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 SEC62Q99442 399 aaKnown RBP2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 NUDT22Q9BRQ3 303 aa2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 TWSG1Q9GZX9 223 aa2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 SMOC2Q9H3U7 446 aa2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 CXorf36Q9H7Y0 433 aa2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 DBNDD1Q9H9R9 158 aa2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 GBA2Q9HCG7 927 aaPredicted RBP2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 SEPSECSQ9HD40 501 aaKnown RBP2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 RIC8AQ9NPQ8 531 aa2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 PDGFCQ9NRA1 345 aa2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 RASSF1Q9NS23 344 aa2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 RNF186Q9NXI6 227 aa2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 DKK3Q9UBP4 350 aa2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 DNAJB11Q9UBS4 358 aa2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 VPS51Q9UID3 782 aa2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 FEM1BQ9UK73 627 aa2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 NDRG4Q9ULP0 352 aaKnown RBP2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 ZBTB32Q9Y2Y4 487 aaPredicted RBP2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 LOC285556D6RIA3 1793 aa2.78□□□□□ -1.96
SMARCB1-208ENST00000634926 DOCK2Q92608 1830 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 RFX7Q2KHR2 1363 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 MAPK8IP3Q9UPT6 1336 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 WDFY4Q6ZS81 3184 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 HMX3A6NHT5 357 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 hCG_1984214I3L0E3 225 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 RGS10O43665 173 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 SRGAP2O75044 1071 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 TUBB4AP04350 444 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 PCCAP05165 728 aaPredicted RBP2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 ALPLP05186 524 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 PRKCBP05771 671 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 IGKV5-2P06315 115 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 POLBP06746 335 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 CSF1RP07333 972 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 FAM163BP0C2L3 166 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 SRGAP2BP0DMP2 458 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 NR2F6P10588 404 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 PRKAR1BP31321 381 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 MMP13P45452 471 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 RXRGP48443 463 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 AARSP49588 968 aaKnown RBP eCLIP2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 NDUFV1P49821 464 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 CDK7P50613 346 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 CCT8P50990 548 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 PRKAG1P54619 331 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms