RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 MYLKQ15746 1914 aa16■□□□□ 0.15
SNRNP48-203ENST00000634363 A0A087WV48 116 aa15.99■□□□□ 0.15
SNRNP48-203ENST00000634363 GOLGA8SH3BPF8 625 aa15.99■□□□□ 0.15
SNRNP48-203ENST00000634363 APOEP02649 317 aa15.99■□□□□ 0.15
SNRNP48-203ENST00000634363 CALB1P05937 261 aa15.99■□□□□ 0.15
SNRNP48-203ENST00000634363 GOT1P17174 413 aa15.99■□□□□ 0.15
SNRNP48-203ENST00000634363 C5AR1P21730 350 aa15.99■□□□□ 0.15
SNRNP48-203ENST00000634363 PRKCIP41743 596 aa15.99■□□□□ 0.15
SNRNP48-203ENST00000634363 STK19P49842 368 aaPredicted RBP15.99■□□□□ 0.15
SNRNP48-203ENST00000634363 CCR5P51681 352 aa15.99■□□□□ 0.15
SNRNP48-203ENST00000634363 RNASE9P60153 205 aaKnown RBP15.99■□□□□ 0.15
SNRNP48-203ENST00000634363 CDK17Q00537 523 aa15.99■□□□□ 0.15
SNRNP48-203ENST00000634363 SHBQ15464 509 aa15.99■□□□□ 0.15
SNRNP48-203ENST00000634363 C2CD6Q53TS8 623 aa15.99■□□□□ 0.15
SNRNP48-203ENST00000634363 SLC45A4Q5BKX6 768 aa15.99■□□□□ 0.15
SNRNP48-203ENST00000634363 ZC3H12AQ5D1E8 599 aaKnown RBP15.99■□□□□ 0.15
SNRNP48-203ENST00000634363 C6orf118Q5T5N4 469 aa15.99■□□□□ 0.15
SNRNP48-203ENST00000634363 E4F1Q66K89 784 aaPredicted RBP15.99■□□□□ 0.15
SNRNP48-203ENST00000634363 PPP1R2P3Q6NXS1 205 aa15.99■□□□□ 0.15
SNRNP48-203ENST00000634363 CHSY1Q86X52 802 aa15.99■□□□□ 0.15
SNRNP48-203ENST00000634363 VSTM4Q8IW00 320 aa15.99■□□□□ 0.15
SNRNP48-203ENST00000634363 DEFB106AQ8N104 65 aa15.99■□□□□ 0.15
SNRNP48-203ENST00000634363 KDM1BQ8NB78 822 aa15.99■□□□□ 0.15
SNRNP48-203ENST00000634363 SAP25Q8TEE9 199 aa15.99■□□□□ 0.15
SNRNP48-203ENST00000634363 SYN2Q92777 582 aaPredicted RBP15.99■□□□□ 0.15
SNRNP48-203ENST00000634363 PTPRN2Q92932 1015 aa15.99■□□□□ 0.15
SNRNP48-203ENST00000634363 SLC2A13Q96QE2 648 aa15.99■□□□□ 0.15
SNRNP48-203ENST00000634363 HAUS4Q9H6D7 363 aa15.99■□□□□ 0.15
SNRNP48-203ENST00000634363 ADAM22Q9P0K1 906 aa15.99■□□□□ 0.15
SNRNP48-203ENST00000634363 DOCK9Q9BZ29 2069 aa15.98■□□□□ 0.15
SNRNP48-203ENST00000634363 TLR4O00206 839 aa15.98■□□□□ 0.15
SNRNP48-203ENST00000634363 RFPL3O75679 317 aa15.98■□□□□ 0.15
SNRNP48-203ENST00000634363 TRUB2O95900 331 aaKnown RBP15.98■□□□□ 0.15
SNRNP48-203ENST00000634363 ADH1BP00325 375 aa15.98■□□□□ 0.15
SNRNP48-203ENST00000634363 VAV1P15498 845 aa15.98■□□□□ 0.15
SNRNP48-203ENST00000634363 TACR2P21452 398 aa15.98■□□□□ 0.15
SNRNP48-203ENST00000634363 ITPKBP27987 946 aa15.98■□□□□ 0.15
SNRNP48-203ENST00000634363 MAT2AP31153 395 aaKnown RBP15.98■□□□□ 0.15
SNRNP48-203ENST00000634363 CASP14P31944 242 aa15.98■□□□□ 0.15
SNRNP48-203ENST00000634363 ABCG1P45844 678 aa15.98■□□□□ 0.15
SNRNP48-203ENST00000634363 ARRB1P49407 418 aaPredicted RBP15.98■□□□□ 0.15
SNRNP48-203ENST00000634363 ADPRHP54922 357 aa15.98■□□□□ 0.15
SNRNP48-203ENST00000634363 TARDBPQ13148 414 aaKnown RBP eCLIP15.98■□□□□ 0.15
SNRNP48-203ENST00000634363 ARID5BQ14865 1188 aa15.98■□□□□ 0.15
SNRNP48-203ENST00000634363 ACCSLQ4AC99 568 aa15.98■□□□□ 0.15
SNRNP48-203ENST00000634363 VPS36Q86VN1 386 aa15.98■□□□□ 0.15
SNRNP48-203ENST00000634363 PHF13Q86YI8 300 aaPredicted RBP15.98■□□□□ 0.15
SNRNP48-203ENST00000634363 SLC39A13Q96H72 371 aa15.98■□□□□ 0.15
SNRNP48-203ENST00000634363 DDIT4Q9NX09 232 aa15.98■□□□□ 0.15
SNRNP48-203ENST00000634363 RRN3Q9NYV6 651 aa15.98■□□□□ 0.15
SNRNP48-203ENST00000634363 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.98■□□□□ 0.15
SNRNP48-203ENST00000634363 NYNRINQ9P2P1 1898 aaKnown RBP15.98■□□□□ 0.15
SNRNP48-203ENST00000634363 STAP1Q9ULZ2 295 aa15.98■□□□□ 0.15
SNRNP48-203ENST00000634363 PCDHGA1Q9Y5H4 931 aa15.98■□□□□ 0.15
SNRNP48-203ENST00000634363 BZW2Q9Y6E2 419 aaKnown RBP15.98■□□□□ 0.15
SNRNP48-203ENST00000634363 COL5A1P20908 1838 aaPredicted RBP15.98■□□□□ 0.15
SNRNP48-203ENST00000634363 KNTC1P50748 2209 aa15.98■□□□□ 0.15
SNRNP48-203ENST00000634363 SYNJ2BP-COX16A0A087WUM0 186 aa15.97■□□□□ 0.15
SNRNP48-203ENST00000634363 A0A1W2PR77 199 aa15.97■□□□□ 0.15
SNRNP48-203ENST00000634363 E9PAM4 449 aa15.97■□□□□ 0.15
SNRNP48-203ENST00000634363 SERPING1P05155 500 aa15.97■□□□□ 0.15
SNRNP48-203ENST00000634363 SKILP12757 684 aa15.97■□□□□ 0.15
SNRNP48-203ENST00000634363 PDGFRAP16234 1089 aa15.97■□□□□ 0.15
SNRNP48-203ENST00000634363 NOS2P35228 1153 aa15.97■□□□□ 0.15
SNRNP48-203ENST00000634363 ACAD10Q6JQN1 1059 aa15.97■□□□□ 0.15
SNRNP48-203ENST00000634363 LRRC69Q6ZNQ3 347 aa15.97■□□□□ 0.15
SNRNP48-203ENST00000634363 ZNF571Q7Z3V5 609 aaPredicted RBP15.97■□□□□ 0.15
SNRNP48-203ENST00000634363 PRPF39Q86UA1 669 aaKnown RBP15.97■□□□□ 0.15
SNRNP48-203ENST00000634363 CIR1Q86X95 450 aaPredicted RBP15.97■□□□□ 0.15
SNRNP48-203ENST00000634363 NXPE2Q96DL1 559 aa15.97■□□□□ 0.15
SNRNP48-203ENST00000634363 SYT11Q9BT88 431 aa15.97■□□□□ 0.15
SNRNP48-203ENST00000634363 METTL5Q9NRN9 209 aaKnown RBP15.97■□□□□ 0.15
SNRNP48-203ENST00000634363 COX16Q9P0S2 106 aa15.97■□□□□ 0.15
SNRNP48-203ENST00000634363 SLC12A6Q9UHW9 1150 aa15.97■□□□□ 0.15
SNRNP48-203ENST00000634363 TMCO5BA8MYB1 307 aa15.96■□□□□ 0.15
SNRNP48-203ENST00000634363 F5H5T6 163 aa15.96■□□□□ 0.15
SNRNP48-203ENST00000634363 YKT6O15498 198 aa15.96■□□□□ 0.15
SNRNP48-203ENST00000634363 IGLV3-25P01717 112 aa15.96■□□□□ 0.15
SNRNP48-203ENST00000634363 C1SP09871 688 aa15.96■□□□□ 0.15
SNRNP48-203ENST00000634363 MZF1P28698 734 aaPredicted RBP15.96■□□□□ 0.15
SNRNP48-203ENST00000634363 SULT1E1P49888 294 aa15.96■□□□□ 0.15
SNRNP48-203ENST00000634363 METAP1P53582 386 aa15.96■□□□□ 0.15
SNRNP48-203ENST00000634363 PPP2CBP62714 309 aa15.96■□□□□ 0.15
SNRNP48-203ENST00000634363 PPP2CAP67775 309 aa15.96■□□□□ 0.15
SNRNP48-203ENST00000634363 C1QBPQ07021 282 aaKnown RBP15.96■□□□□ 0.15
SNRNP48-203ENST00000634363 NME3Q13232 169 aa15.96■□□□□ 0.15
SNRNP48-203ENST00000634363 ELAVL3Q14576 367 aaKnown RBP15.96■□□□□ 0.15
SNRNP48-203ENST00000634363 TSR1Q2NL82 804 aaKnown RBP15.96■□□□□ 0.15
SNRNP48-203ENST00000634363 POM121L1PQ3SYA9 428 aa15.96■□□□□ 0.15
SNRNP48-203ENST00000634363 HES3Q5TGS1 186 aa15.96■□□□□ 0.15
SNRNP48-203ENST00000634363 MON1BQ7L1V2 547 aa15.96■□□□□ 0.15
SNRNP48-203ENST00000634363 GAS2L3Q86XJ1 694 aa15.96■□□□□ 0.15
SNRNP48-203ENST00000634363 ATP6V0D2Q8N8Y2 350 aa15.96■□□□□ 0.15
SNRNP48-203ENST00000634363 RNF34Q969K3 372 aa15.96■□□□□ 0.15
SNRNP48-203ENST00000634363 BTN2A3PQ96KV6 586 aa15.96■□□□□ 0.15
SNRNP48-203ENST00000634363 SELENOOQ9BVL4 669 aa15.96■□□□□ 0.15
SNRNP48-203ENST00000634363 LAMA5O15230 3695 aa15.96■□□□□ 0.14
SNRNP48-203ENST00000634363 CELSR3Q9NYQ7 3312 aa15.96■□□□□ 0.14
SNRNP48-203ENST00000634363 ASXL3Q9C0F0 2248 aa15.95■□□□□ 0.14
SNRNP48-203ENST00000634363 ITPR1Q14643 2758 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms