RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 ATG9AQ7Z3C6 839 aa13.37□□□□□ -0.27
SYNGAP1-208ENST00000629380 ARMC8Q8IUR7 673 aa13.37□□□□□ -0.27
SYNGAP1-208ENST00000629380 WDR49Q8IV35 697 aa13.37□□□□□ -0.27
SYNGAP1-208ENST00000629380 COX4I2Q96KJ9 171 aa13.37□□□□□ -0.27
SYNGAP1-208ENST00000629380 NRDE2Q9H7Z3 1164 aa13.37□□□□□ -0.27
SYNGAP1-208ENST00000629380 CROTQ9UKG9 612 aa13.37□□□□□ -0.27
SYNGAP1-208ENST00000629380 B3GAT3O94766 335 aa13.37□□□□□ -0.27
SYNGAP1-208ENST00000629380 CYP2F1P24903 491 aa13.37□□□□□ -0.27
SYNGAP1-208ENST00000629380 N4BP2L1Q5TBK1 243 aaPredicted RBP13.37□□□□□ -0.27
SYNGAP1-208ENST00000629380 TTC27Q6P3X3 843 aa13.37□□□□□ -0.27
SYNGAP1-208ENST00000629380 KCNH7Q9NS40 1196 aa13.37□□□□□ -0.27
SYNGAP1-208ENST00000629380 ZNF222Q9UK12 451 aa13.37□□□□□ -0.27
SYNGAP1-208ENST00000629380 FAM25EA8MYX2 175 aa13.37□□□□□ -0.27
SYNGAP1-208ENST00000629380 TNFRSF21O75509 655 aa13.37□□□□□ -0.27
SYNGAP1-208ENST00000629380 IFNGP01579 166 aa13.37□□□□□ -0.27
SYNGAP1-208ENST00000629380 CLEC17AQ6ZS10 378 aa13.37□□□□□ -0.27
SYNGAP1-208ENST00000629380 TEKT5Q96M29 485 aa13.37□□□□□ -0.27
SYNGAP1-208ENST00000629380 OPTCQ9UBM4 332 aa13.37□□□□□ -0.27
SYNGAP1-208ENST00000629380 CDH9Q9ULB4 789 aa13.37□□□□□ -0.27
SYNGAP1-208ENST00000629380 SNX6Q9UNH7 406 aa13.37□□□□□ -0.27
SYNGAP1-208ENST00000629380 TBC1D30Q9Y2I9 924 aa13.37□□□□□ -0.27
SYNGAP1-208ENST00000629380 SAGE2PA6NJ88 616 aa13.37□□□□□ -0.27
SYNGAP1-208ENST00000629380 PLSCR1O15162 318 aa13.37□□□□□ -0.27
SYNGAP1-208ENST00000629380 FGF10O15520 208 aaPredicted RBP13.37□□□□□ -0.27
SYNGAP1-208ENST00000629380 POLR2EP19388 210 aaKnown RBP13.37□□□□□ -0.27
SYNGAP1-208ENST00000629380 SCNN1BP51168 640 aa13.37□□□□□ -0.27
SYNGAP1-208ENST00000629380 METTL3Q86U44 580 aaKnown RBP13.37□□□□□ -0.27
SYNGAP1-208ENST00000629380 MRPL9Q9BYD2 267 aaKnown RBP13.37□□□□□ -0.27
SYNGAP1-208ENST00000629380 SLC9A3R1O14745 358 aaPredicted RBP13.37□□□□□ -0.27
SYNGAP1-208ENST00000629380 OGTO15294 1046 aa13.37□□□□□ -0.27
SYNGAP1-208ENST00000629380 RAMP2O60895 175 aa13.37□□□□□ -0.27
SYNGAP1-208ENST00000629380 GYPCP04921 128 aa13.37□□□□□ -0.27
SYNGAP1-208ENST00000629380 HOXC12P31275 282 aa13.37□□□□□ -0.27
SYNGAP1-208ENST00000629380 PPP4CP60510 307 aa13.37□□□□□ -0.27
SYNGAP1-208ENST00000629380 BOP1Q14137 746 aaKnown RBP13.37□□□□□ -0.27
SYNGAP1-208ENST00000629380 MTF1Q14872 753 aa13.37□□□□□ -0.27
SYNGAP1-208ENST00000629380 CBWD6Q4V339 395 aa13.37□□□□□ -0.27
SYNGAP1-208ENST00000629380 TMPRSS6Q8IU80 811 aa13.37□□□□□ -0.27
SYNGAP1-208ENST00000629380 UBA3Q8TBC4 463 aa13.37□□□□□ -0.27
SYNGAP1-208ENST00000629380 CASKIN2Q8WXE0 1202 aa13.37□□□□□ -0.27
SYNGAP1-208ENST00000629380 VPS4AQ9UN37 437 aa13.37□□□□□ -0.27
SYNGAP1-208ENST00000629380 ZNF470Q6ECI4 717 aa13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 CSGALNACT1Q8TDX6 532 aa13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 RIT1Q92963 219 aa13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 SERPINB11Q96P15 392 aa13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 FAM118BQ9BPY3 351 aa13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 GPN1Q9HCN4 374 aaPredicted RBP13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 ZNF609O15014 1411 aa13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 HNRNPH1P31943 449 aaKnown RBP13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 MAPK8P45983 427 aa13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 THOP1P52888 689 aa13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 OVGP1Q12889 678 aa13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 OTUD3Q5T2D3 398 aaPredicted RBP13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 FAM117BQ6P1L5 589 aa13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 MPZL3Q6UWV2 235 aa13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 ZNF607Q96SK3 696 aa13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 URADA6NGE7 173 aa13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 GATBO75879 557 aaKnown RBP13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 RPA1P27694 616 aa13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 SLC26A3P40879 764 aa13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 DLG1Q12959 904 aa13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 B3GNT6Q6ZMB0 384 aa13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 BRSK2Q8IWQ3 736 aa13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 PHF10Q8WUB8 498 aaKnown RBP13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 PI4K2AQ9BTU6 479 aa13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 FBXO10Q9UK96 956 aa13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 FKBP1BP68106 108 aa13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 MYBPC3Q14896 1274 aa13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 INSCQ1MX18 579 aa13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 STOX1Q6ZVD7 989 aa13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 LMAN2LQ9H0V9 348 aa13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 INVSQ9Y283 1065 aa13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 PCDHGB3Q9Y5G1 929 aa13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 MIA3Q5JRA6 1907 aa13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 LIN7AO14910 233 aaPredicted RBP13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 OR10H2O60403 315 aa13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 DNAJB2P25686 324 aa13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 OMPP47874 163 aa13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 TCHHL1Q5QJ38 904 aaPredicted RBP13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 ZNF276Q8N554 614 aa13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 CPVLQ9H3G5 476 aa13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 FAM50BQ9Y247 325 aa13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 NFKB1P19838 968 aa13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 BTBD10Q9BSF8 475 aa13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 TTLL2Q9BWV7 592 aa13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 PIF1Q9H611 641 aa13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 MSH4O15457 936 aa13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 ZBTB14O43829 449 aa13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 APOC1P02654 83 aa13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 CSHL1Q14406 222 aa13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 SQLEQ14534 574 aa13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 NEK7Q8TDX7 302 aa13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 C18orf25Q96B23 403 aaPredicted RBP13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 CNPPD1Q9BV87 410 aa13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 NUP214P35658 2090 aaPredicted RBP13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 FGFR1P11362 822 aa13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 CLK2P49760 499 aaKnown RBP13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 RGS1Q08116 209 aa13.36□□□□□ -0.27
SYNGAP1-208ENST00000629380 GMCL1P1Q8NEA9 526 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms