RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.36□□□□□ -0.59
DDX41-219ENST00000629036 CXorf51AA0A1B0GTR3 108 aa11.36□□□□□ -0.59
DDX41-219ENST00000629036 SYNCRIPO60506 623 aaKnown RBP11.36□□□□□ -0.59
DDX41-219ENST00000629036 ZNF217O75362 1048 aa11.36□□□□□ -0.59
DDX41-219ENST00000629036 MOCS3O95396 460 aa11.36□□□□□ -0.59
DDX41-219ENST00000629036 PROS1P07225 676 aa11.36□□□□□ -0.59
DDX41-219ENST00000629036 CTSLP07711 333 aa11.36□□□□□ -0.59
DDX41-219ENST00000629036 TMEM253P0C7T8 217 aa11.36□□□□□ -0.59
DDX41-219ENST00000629036 HTR7P34969 479 aa11.36□□□□□ -0.59
DDX41-219ENST00000629036 DRD3P35462 400 aa11.36□□□□□ -0.59
DDX41-219ENST00000629036 SERPINH1P50454 418 aaKnown RBP11.36□□□□□ -0.59
DDX41-219ENST00000629036 ELAVL3Q14576 367 aaKnown RBP11.36□□□□□ -0.59
DDX41-219ENST00000629036 TCEAL1Q15170 157 aa11.36□□□□□ -0.59
DDX41-219ENST00000629036 CCDC6Q16204 474 aa11.36□□□□□ -0.59
DDX41-219ENST00000629036 SPDYCQ5MJ68 293 aa11.36□□□□□ -0.59
DDX41-219ENST00000629036 ERMARDQ5T6L9 678 aa11.36□□□□□ -0.59
DDX41-219ENST00000629036 IL31Q6EBC2 164 aa11.36□□□□□ -0.59
DDX41-219ENST00000629036 LINGO4Q6UY18 593 aa11.36□□□□□ -0.59
DDX41-219ENST00000629036 Q6ZVU0 165 aa11.36□□□□□ -0.59
DDX41-219ENST00000629036 TMEM139Q8IV31 216 aa11.36□□□□□ -0.59
DDX41-219ENST00000629036 PSTKQ8IV42 348 aaKnown RBP11.36□□□□□ -0.59
DDX41-219ENST00000629036 TMEFF1Q8IYR6 380 aa11.36□□□□□ -0.59
DDX41-219ENST00000629036 UMODL1-AS1Q8N2C9 162 aa11.36□□□□□ -0.59
DDX41-219ENST00000629036 STK40Q8N2I9 435 aa11.36□□□□□ -0.59
DDX41-219ENST00000629036 OR2A12Q8NGT7 310 aa11.36□□□□□ -0.59
DDX41-219ENST00000629036 ZNF564Q8TBZ8 553 aaPredicted RBP11.36□□□□□ -0.59
DDX41-219ENST00000629036 TOE1Q96GM8 510 aaKnown RBP11.36□□□□□ -0.59
DDX41-219ENST00000629036 ZNF419Q96HQ0 510 aaPredicted RBP11.36□□□□□ -0.59
DDX41-219ENST00000629036 SPACA7Q96KW9 195 aa11.36□□□□□ -0.59
DDX41-219ENST00000629036 ORAI3Q9BRQ5 295 aa11.36□□□□□ -0.59
DDX41-219ENST00000629036 MUC3BQ9H195 1237 aa11.36□□□□□ -0.59
DDX41-219ENST00000629036 ARRDC1-AS1Q9H2J1 176 aa11.36□□□□□ -0.59
DDX41-219ENST00000629036 PABPC3Q9H361 631 aaKnown RBP11.36□□□□□ -0.59
DDX41-219ENST00000629036 SMOC1Q9H4F8 434 aa11.36□□□□□ -0.59
DDX41-219ENST00000629036 PDFQ9HBH1 243 aa11.36□□□□□ -0.59
DDX41-219ENST00000629036 OSGEPQ9NPF4 335 aa11.36□□□□□ -0.59
DDX41-219ENST00000629036 RXFP3Q9NSD7 469 aa11.36□□□□□ -0.59
DDX41-219ENST00000629036 TMEM74BQ9NUR3 256 aa11.36□□□□□ -0.59
DDX41-219ENST00000629036 SUN2Q9UH99 717 aa11.36□□□□□ -0.59
DDX41-219ENST00000629036 PCSK1NQ9UHG2 260 aa11.36□□□□□ -0.59
DDX41-219ENST00000629036 DNAI1Q9UI46 699 aa11.36□□□□□ -0.59
DDX41-219ENST00000629036 ZMIZ1Q9ULJ6 1067 aa11.36□□□□□ -0.59
DDX41-219ENST00000629036 PCDHGA5Q9Y5G8 931 aa11.36□□□□□ -0.59
DDX41-219ENST00000629036 SLCO1B1Q9Y6L6 691 aa11.36□□□□□ -0.59
DDX41-219ENST00000629036 AKAP13Q12802 2813 aa11.36□□□□□ -0.59
DDX41-219ENST00000629036 WDFY3Q8IZQ1 3526 aa11.35□□□□□ -0.59
DDX41-219ENST00000629036 C1QTNF9BB2RNN3 333 aa11.35□□□□□ -0.59
DDX41-219ENST00000629036 EIF3CLB5ME19 914 aaKnown RBP11.35□□□□□ -0.59
DDX41-219ENST00000629036 MID1O15344 667 aa11.35□□□□□ -0.59
DDX41-219ENST00000629036 C1QTNF9P0C862 333 aa11.35□□□□□ -0.59
DDX41-219ENST00000629036 GOT1P17174 413 aa11.35□□□□□ -0.59
DDX41-219ENST00000629036 IL4RP24394 825 aa11.35□□□□□ -0.59
DDX41-219ENST00000629036 EPHB2P29323 1055 aa11.35□□□□□ -0.59
DDX41-219ENST00000629036 CD6P30203 668 aa11.35□□□□□ -0.59
DDX41-219ENST00000629036 ACSL1P33121 698 aa11.35□□□□□ -0.59
DDX41-219ENST00000629036 MPLP40238 635 aa11.35□□□□□ -0.59
DDX41-219ENST00000629036 TAS2R40P59535 323 aa11.35□□□□□ -0.59
DDX41-219ENST00000629036 ZBTB16Q05516 673 aa11.35□□□□□ -0.59
DDX41-219ENST00000629036 PIGHQ14442 188 aaPredicted RBP11.35□□□□□ -0.59
DDX41-219ENST00000629036 DLG2Q15700 870 aa11.35□□□□□ -0.59
DDX41-219ENST00000629036 ELF2Q15723 593 aa11.35□□□□□ -0.59
DDX41-219ENST00000629036 CST6Q15828 149 aa11.35□□□□□ -0.59
DDX41-219ENST00000629036 CSRP2Q16527 193 aa11.35□□□□□ -0.59
DDX41-219ENST00000629036 SMTNL2Q2TAL5 461 aa11.35□□□□□ -0.59
DDX41-219ENST00000629036 ZNF776Q68DI1 518 aaPredicted RBP11.35□□□□□ -0.59
DDX41-219ENST00000629036 TCEAL6Q6IPX3 200 aa11.35□□□□□ -0.59
DDX41-219ENST00000629036 RWDD4Q6NW29 188 aaKnown RBP11.35□□□□□ -0.59
DDX41-219ENST00000629036 C22orf39Q6P5X5 142 aa11.35□□□□□ -0.59
DDX41-219ENST00000629036 CCDC117Q8IWD4 279 aaPredicted RBP11.35□□□□□ -0.59
DDX41-219ENST00000629036 TP53INP2Q8IXH6 220 aa11.35□□□□□ -0.59
DDX41-219ENST00000629036 PGBD3Q8N328 593 aa11.35□□□□□ -0.59
DDX41-219ENST00000629036 C1orf216Q8TAB5 229 aa11.35□□□□□ -0.59
DDX41-219ENST00000629036 TEKT4Q8WW24 435 aa11.35□□□□□ -0.59
DDX41-219ENST00000629036 PRCCQ92733 491 aaPredicted RBP11.35□□□□□ -0.59
DDX41-219ENST00000629036 TCEAL3Q969E4 200 aa11.35□□□□□ -0.59
DDX41-219ENST00000629036 HMCESQ96FZ2 354 aa11.35□□□□□ -0.59
DDX41-219ENST00000629036 EIF3CQ99613 913 aaKnown RBP11.35□□□□□ -0.59
DDX41-219ENST00000629036 EPAS1Q99814 870 aa11.35□□□□□ -0.59
DDX41-219ENST00000629036 C2orf49Q9BVC5 232 aaPredicted RBP11.35□□□□□ -0.59
DDX41-219ENST00000629036 MAGEH1Q9H213 219 aa11.35□□□□□ -0.59
DDX41-219ENST00000629036 DHX35Q9H5Z1 703 aaKnown RBP11.35□□□□□ -0.59
DDX41-219ENST00000629036 ATP13A1Q9HD20 1204 aa11.35□□□□□ -0.59
DDX41-219ENST00000629036 CWC15Q9P013 229 aaKnown RBP11.35□□□□□ -0.59
DDX41-219ENST00000629036 UVRAGQ9P2Y5 699 aa11.35□□□□□ -0.59
DDX41-219ENST00000629036 PILRBQ9UKJ0 227 aa11.35□□□□□ -0.59
DDX41-219ENST00000629036 REXO2Q9Y3B8 237 aaKnown RBP11.35□□□□□ -0.59
DDX41-219ENST00000629036 ARID1BQ8NFD5 2236 aaPredicted RBP11.35□□□□□ -0.59
DDX41-219ENST00000629036 PCNX2A6NKB5 2137 aa11.35□□□□□ -0.59
DDX41-219ENST00000629036 PATE3B3GLJ2 98 aa11.34□□□□□ -0.59
DDX41-219ENST00000629036 ALOX15BO15296 676 aa11.34□□□□□ -0.59
DDX41-219ENST00000629036 FGF10O15520 208 aaPredicted RBP11.34□□□□□ -0.59
DDX41-219ENST00000629036 CREB3O43889 395 aa11.34□□□□□ -0.59
DDX41-219ENST00000629036 PRPSAP2O60256 369 aa11.34□□□□□ -0.59
DDX41-219ENST00000629036 RAMP2O60895 175 aa11.34□□□□□ -0.59
DDX41-219ENST00000629036 RHOBTB1O94844 696 aa11.34□□□□□ -0.59
DDX41-219ENST00000629036 PROSCO94903 275 aa11.34□□□□□ -0.59
DDX41-219ENST00000629036 H2AFZP0C0S5 128 aa11.34□□□□□ -0.59
DDX41-219ENST00000629036 ZNF806P0C7X5 589 aa11.34□□□□□ -0.59
DDX41-219ENST00000629036 RARAP10276 462 aa11.34□□□□□ -0.59
DDX41-219ENST00000629036 ITPKAP23677 461 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms