RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 ADORA2AP29274 412 aa3.51□□□□□ -1.85
VPS8-228ENST00000628962 PRKAR1BP31321 381 aa3.51□□□□□ -1.85
VPS8-228ENST00000628962 COPB2P35606 906 aa3.51□□□□□ -1.85
VPS8-228ENST00000628962 POLD2P49005 469 aa3.51□□□□□ -1.85
VPS8-228ENST00000628962 MTHFSP49914 203 aa3.51□□□□□ -1.85
VPS8-228ENST00000628962 CCR9P51686 369 aa3.51□□□□□ -1.85
VPS8-228ENST00000628962 PGDP52209 483 aa3.51□□□□□ -1.85
VPS8-228ENST00000628962 DGKEP52429 567 aa3.51□□□□□ -1.85
VPS8-228ENST00000628962 GALNT2Q10471 571 aa3.51□□□□□ -1.85
VPS8-228ENST00000628962 PDCLQ13371 301 aa3.51□□□□□ -1.85
VPS8-228ENST00000628962 MTX1Q13505 466 aa3.51□□□□□ -1.85
VPS8-228ENST00000628962 CSHL1Q14406 222 aa3.51□□□□□ -1.85
VPS8-228ENST00000628962 SMAD1Q15797 465 aaKnown RBP3.51□□□□□ -1.85
VPS8-228ENST00000628962 MEA1Q16626 185 aa3.51□□□□□ -1.85
VPS8-228ENST00000628962 ZIK1Q3SY52 487 aaPredicted RBP3.51□□□□□ -1.85
VPS8-228ENST00000628962 TRIM60Q495X7 471 aa3.51□□□□□ -1.85
VPS8-228ENST00000628962 CFAP58Q5T655 872 aa3.51□□□□□ -1.85
VPS8-228ENST00000628962 SLC9C2Q5TAH2 1124 aa3.51□□□□□ -1.85
VPS8-228ENST00000628962 MFSD4BQ5TF39 518 aa3.51□□□□□ -1.85
VPS8-228ENST00000628962 FAM205BPQ63HN1 556 aa3.51□□□□□ -1.85
VPS8-228ENST00000628962 TMCO3Q6UWJ1 677 aa3.51□□□□□ -1.85
VPS8-228ENST00000628962 SYNE3Q6ZMZ3 975 aa3.51□□□□□ -1.85
VPS8-228ENST00000628962 B4GALNT4Q76KP1 1039 aa3.51□□□□□ -1.85
VPS8-228ENST00000628962 UBE2Q1Q7Z7E8 422 aa3.51□□□□□ -1.85
VPS8-228ENST00000628962 ARMC8Q8IUR7 673 aa3.51□□□□□ -1.85
VPS8-228ENST00000628962 AFAP1Q8N556 730 aa3.51□□□□□ -1.85
VPS8-228ENST00000628962 LINC01465Q8N7H1 131 aa3.51□□□□□ -1.85
VPS8-228ENST00000628962 USP38Q8NB14 1042 aa3.51□□□□□ -1.85
VPS8-228ENST00000628962 MBD3L2Q8NHZ7 208 aaPredicted RBP3.51□□□□□ -1.85
VPS8-228ENST00000628962 STAMQ92783 540 aa3.51□□□□□ -1.85
VPS8-228ENST00000628962 RNF125Q96EQ8 232 aa3.51□□□□□ -1.85
VPS8-228ENST00000628962 RSRC1Q96IZ7 334 aaKnown RBP3.51□□□□□ -1.85
VPS8-228ENST00000628962 ZNF479Q96JC4 524 aa3.51□□□□□ -1.85
VPS8-228ENST00000628962 HIST1H2AAQ96QV6 131 aa3.51□□□□□ -1.85
VPS8-228ENST00000628962 ABHD16BQ9H3Z7 469 aa3.51□□□□□ -1.85
VPS8-228ENST00000628962 SMYD2Q9NRG4 433 aa3.51□□□□□ -1.85
VPS8-228ENST00000628962 GAR1Q9NY12 217 aaKnown RBP3.51□□□□□ -1.85
VPS8-228ENST00000628962 CNTN6Q9UQ52 1028 aa3.51□□□□□ -1.85
VPS8-228ENST00000628962 MRPS17Q9Y2R5 130 aaKnown RBP3.51□□□□□ -1.85
VPS8-228ENST00000628962 RGS12O14924 1447 aa3.51□□□□□ -1.85
VPS8-228ENST00000628962 NPATQ14207 1427 aa3.51□□□□□ -1.85
VPS8-228ENST00000628962 ABCA8O94911 1581 aa3.51□□□□□ -1.85
VPS8-228ENST00000628962 CARMIL1Q5VZK9 1371 aa3.51□□□□□ -1.85
VPS8-228ENST00000628962 EFCAB5A4FU69 1503 aa3.5□□□□□ -1.85
VPS8-228ENST00000628962 EVPLQ92817 2033 aa3.5□□□□□ -1.85
VPS8-228ENST00000628962 VWA3AA6NCI4 1184 aa3.5□□□□□ -1.85
VPS8-228ENST00000628962 FAM90A18PA6NE21 464 aa3.5□□□□□ -1.85
VPS8-228ENST00000628962 FAM90A16PA6NEW6 464 aa3.5□□□□□ -1.85
VPS8-228ENST00000628962 IFITM10A6NMD0 228 aa3.5□□□□□ -1.85
VPS8-228ENST00000628962 FAM90A9PA6NNJ1 464 aa3.5□□□□□ -1.85
VPS8-228ENST00000628962 FAM90A5PA8MXJ8 464 aa3.5□□□□□ -1.85
VPS8-228ENST00000628962 KIF28PB7ZC32 967 aa3.5□□□□□ -1.85
VPS8-228ENST00000628962 SPTLC2O15270 562 aa3.5□□□□□ -1.85
VPS8-228ENST00000628962 CD3EAPO15446 510 aaKnown RBP3.5□□□□□ -1.85
VPS8-228ENST00000628962 KLK10O43240 276 aa3.5□□□□□ -1.85
VPS8-228ENST00000628962 USO1O60763 962 aaKnown RBP3.5□□□□□ -1.85
VPS8-228ENST00000628962 TAF5LO75529 589 aa3.5□□□□□ -1.85
VPS8-228ENST00000628962 TMEM63AO94886 807 aa3.5□□□□□ -1.85
VPS8-228ENST00000628962 LARGE1O95461 756 aa3.5□□□□□ -1.85
VPS8-228ENST00000628962 VNN1O95497 513 aa3.5□□□□□ -1.85
VPS8-228ENST00000628962 SLC3A2P08195 630 aaKnown RBP3.5□□□□□ -1.85
VPS8-228ENST00000628962 FAM90A15PP0C7V4 464 aa3.5□□□□□ -1.85
VPS8-228ENST00000628962 FAM90A14PP0C7W9 464 aa3.5□□□□□ -1.85
VPS8-228ENST00000628962 HGFP14210 728 aa3.5□□□□□ -1.85
VPS8-228ENST00000628962 ABCD3P28288 659 aa3.5□□□□□ -1.85
VPS8-228ENST00000628962 NTSR1P30989 418 aa3.5□□□□□ -1.85
VPS8-228ENST00000628962 PSMC2P35998 433 aaKnown RBP3.5□□□□□ -1.85
VPS8-228ENST00000628962 PGM1P36871 562 aa3.5□□□□□ -1.85
VPS8-228ENST00000628962 STAT1P42224 750 aa3.5□□□□□ -1.85
VPS8-228ENST00000628962 SF3A3Q12874 501 aaKnown RBP eCLIP3.5□□□□□ -1.85
VPS8-228ENST00000628962 LARS2Q15031 903 aaKnown RBP3.5□□□□□ -1.85
VPS8-228ENST00000628962 LY6KQ17RY6 165 aa3.5□□□□□ -1.85
VPS8-228ENST00000628962 PTCHD3Q3KNS1 767 aa3.5□□□□□ -1.85
VPS8-228ENST00000628962 GALNTL6Q49A17 601 aa3.5□□□□□ -1.85
VPS8-228ENST00000628962 ZNF569Q5MCW4 686 aa3.5□□□□□ -1.85
VPS8-228ENST00000628962 WDR45BQ5MNZ6 344 aa3.5□□□□□ -1.85
VPS8-228ENST00000628962 CERCAMQ5T4B2 595 aa3.5□□□□□ -1.85
VPS8-228ENST00000628962 DGAT2L7PQ6IED9 249 aa3.5□□□□□ -1.85
VPS8-228ENST00000628962 PDXDC1Q6P996 788 aa3.5□□□□□ -1.85
VPS8-228ENST00000628962 R3HCC1LQ7Z5L2 792 aaKnown RBP3.5□□□□□ -1.85
VPS8-228ENST00000628962 GALNT5Q7Z7M9 940 aa3.5□□□□□ -1.85
VPS8-228ENST00000628962 IZUMO1Q8IYV9 350 aa3.5□□□□□ -1.85
VPS8-228ENST00000628962 FSTL5Q8N475 847 aaPredicted RBP3.5□□□□□ -1.85
VPS8-228ENST00000628962 SIRT6Q8N6T7 355 aa3.5□□□□□ -1.85
VPS8-228ENST00000628962 ANKRD44Q8N8A2 993 aa3.5□□□□□ -1.85
VPS8-228ENST00000628962 ZMIZ2Q8NF64 920 aa3.5□□□□□ -1.85
VPS8-228ENST00000628962 WIPF2Q8TF74 440 aaPredicted RBP3.5□□□□□ -1.85
VPS8-228ENST00000628962 TBC1D22AQ8WUA7 517 aa3.5□□□□□ -1.85
VPS8-228ENST00000628962 TMEM171Q8WVE6 324 aa3.5□□□□□ -1.85
VPS8-228ENST00000628962 WBP1Q96G27 269 aa3.5□□□□□ -1.85
VPS8-228ENST00000628962 ZDHHC12Q96GR4 267 aa3.5□□□□□ -1.85
VPS8-228ENST00000628962 EIF3CQ99613 913 aaKnown RBP3.5□□□□□ -1.85
VPS8-228ENST00000628962 NUDT22Q9BRQ3 303 aa3.5□□□□□ -1.85
VPS8-228ENST00000628962 TMEM204Q9BSN7 226 aa3.5□□□□□ -1.85
VPS8-228ENST00000628962 LMAN2LQ9H0V9 348 aa3.5□□□□□ -1.85
VPS8-228ENST00000628962 CCDC68Q9H2F9 335 aa3.5□□□□□ -1.85
VPS8-228ENST00000628962 PDCL3Q9H2J4 239 aa3.5□□□□□ -1.85
VPS8-228ENST00000628962 MRPL44Q9H9J2 332 aaKnown RBP3.5□□□□□ -1.85
VPS8-228ENST00000628962 GBA2Q9HCG7 927 aaPredicted RBP3.5□□□□□ -1.85
VPS8-228ENST00000628962 SEMA4BQ9NPR2 832 aaPredicted RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms