RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 CELF6Q96J87 481 aaKnown RBP15.05■□□□□ -0
PNKP-221ENST00000627317 MAK16Q9BXY0 300 aaKnown RBP15.05■□□□□ -0
PNKP-221ENST00000627317 SLC25A13Q9UJS0 675 aa15.05■□□□□ -0
PNKP-221ENST00000627317 GMEB2Q9UKD1 530 aa15.05■□□□□ -0
PNKP-221ENST00000627317 HPCAL4Q9UM19 191 aa15.05■□□□□ -0
PNKP-221ENST00000627317 PACSIN2Q9UNF0 486 aaPredicted RBP15.05■□□□□ -0
PNKP-221ENST00000627317 PLA2G4CQ9UP65 541 aa15.05■□□□□ -0
PNKP-221ENST00000627317 OR51B4Q9Y5P0 310 aa15.05■□□□□ -0
PNKP-221ENST00000627317 EML5Q05BV3 1969 aa15.05■□□□□ -0
PNKP-221ENST00000627317 LAMA1P25391 3075 aa15.05■□□□□ -0
PNKP-221ENST00000627317 ATG2BQ96BY7 2078 aa15.04■□□□□ -0
PNKP-221ENST00000627317 C3orf70A6NLC5 250 aaPredicted RBP15.04■□□□□ -0
PNKP-221ENST00000627317 RASA4BC9J798 803 aa15.04■□□□□ -0
PNKP-221ENST00000627317 CBX4O00257 560 aa15.04■□□□□ -0
PNKP-221ENST00000627317 NPC1O15118 1278 aa15.04■□□□□ -0
PNKP-221ENST00000627317 RASA4O43374 803 aa15.04■□□□□ -0
PNKP-221ENST00000627317 KIF5CO60282 957 aa15.04■□□□□ -0
PNKP-221ENST00000627317 IL4RP24394 825 aa15.04■□□□□ -0
PNKP-221ENST00000627317 MSNP26038 577 aaKnown RBP15.04■□□□□ -0
PNKP-221ENST00000627317 NTSR1P30989 418 aa15.04■□□□□ -0
PNKP-221ENST00000627317 ACVRL1P37023 503 aa15.04■□□□□ -0
PNKP-221ENST00000627317 CETN2P41208 172 aa15.04■□□□□ -0
PNKP-221ENST00000627317 NDST2P52849 883 aa15.04■□□□□ -0
PNKP-221ENST00000627317 ECT2LQ008S8 904 aa15.04■□□□□ -0
PNKP-221ENST00000627317 PLK5Q496M5 336 aa15.04■□□□□ -0
PNKP-221ENST00000627317 SDE2Q6IQ49 451 aa15.04■□□□□ -0
PNKP-221ENST00000627317 MFSD7Q6UXD7 560 aa15.04■□□□□ -0
PNKP-221ENST00000627317 SERPINA13PQ6UXR4 307 aa15.04■□□□□ -0
PNKP-221ENST00000627317 SPOCD1Q6ZMY3 1216 aa15.04■□□□□ -0
PNKP-221ENST00000627317 CEP68Q76N32 757 aa15.04■□□□□ -0
PNKP-221ENST00000627317 RFX6Q8HWS3 928 aa15.04■□□□□ -0
PNKP-221ENST00000627317 NPWQ8N729 165 aa15.04■□□□□ -0
PNKP-221ENST00000627317 PCDH19Q8TAB3 1148 aa15.04■□□□□ -0
PNKP-221ENST00000627317 UBE2Q2Q8WVN8 375 aa15.04■□□□□ -0
PNKP-221ENST00000627317 ARHGEF2Q92974 986 aaKnown RBP15.04■□□□□ -0
PNKP-221ENST00000627317 TRIM44Q96DX7 344 aaPredicted RBP15.04■□□□□ -0
PNKP-221ENST00000627317 HMCESQ96FZ2 354 aa15.04■□□□□ -0
PNKP-221ENST00000627317 LOXL4Q96JB6 756 aa15.04■□□□□ -0
PNKP-221ENST00000627317 RNF157Q96PX1 679 aa15.04■□□□□ -0
PNKP-221ENST00000627317 PSMB7Q99436 277 aa15.04■□□□□ -0
PNKP-221ENST00000627317 HINFPQ9BQA5 517 aa15.04■□□□□ -0
PNKP-221ENST00000627317 DUSP15Q9H1R2 295 aaPredicted RBP15.04■□□□□ -0
PNKP-221ENST00000627317 NOL6Q9H6R4 1146 aaKnown RBP15.04■□□□□ -0
PNKP-221ENST00000627317 ETNK2Q9NVF9 386 aa15.04■□□□□ -0
PNKP-221ENST00000627317 CACNA2D2Q9NY47 1150 aa15.04■□□□□ -0
PNKP-221ENST00000627317 VPS51Q9UID3 782 aa15.04■□□□□ -0
PNKP-221ENST00000627317 RAB23Q9ULC3 237 aa15.04■□□□□ -0
PNKP-221ENST00000627317 MFHAS1Q9Y4C4 1052 aa15.04■□□□□ -0
PNKP-221ENST00000627317 ARHGAP42A6NI28 874 aa15.03■□□□□ -0
PNKP-221ENST00000627317 USP27XA6NNY8 438 aa15.03■□□□□ -0
PNKP-221ENST00000627317 DFFAO00273 331 aa15.03■□□□□ -0
PNKP-221ENST00000627317 APOL1O14791 398 aa15.03■□□□□ -0
PNKP-221ENST00000627317 SNAP91O60641 907 aa15.03■□□□□ -0
PNKP-221ENST00000627317 EPN2O95208 641 aa15.03■□□□□ -0
PNKP-221ENST00000627317 ZFXP17010 805 aaPredicted RBP15.03■□□□□ -0
PNKP-221ENST00000627317 WASP42768 502 aa15.03■□□□□ -0
PNKP-221ENST00000627317 CDKN2BP42772 138 aa15.03■□□□□ -0
PNKP-221ENST00000627317 CTSOP43234 321 aaPredicted RBP15.03■□□□□ -0
PNKP-221ENST00000627317 COPS2P61201 443 aa15.03■□□□□ -0
PNKP-221ENST00000627317 TFDP2Q14188 446 aa15.03■□□□□ -0
PNKP-221ENST00000627317 ZNF234Q14588 700 aa15.03■□□□□ -0
PNKP-221ENST00000627317 RPS6KA1Q15418 735 aa15.03■□□□□ -0
PNKP-221ENST00000627317 KIAA1211LQ6NV74 962 aa15.03■□□□□ -0
PNKP-221ENST00000627317 GPR161Q8N6U8 529 aaKnown RBP15.03■□□□□ -0
PNKP-221ENST00000627317 ALG3Q92685 438 aa15.03■□□□□ -0
PNKP-221ENST00000627317 HES6Q96HZ4 224 aa15.03■□□□□ -0
PNKP-221ENST00000627317 TPSD1Q9BZJ3 242 aa15.03■□□□□ -0
PNKP-221ENST00000627317 LRRC19Q9H756 370 aa15.03■□□□□ -0
PNKP-221ENST00000627317 PRDM16Q9HAZ2 1276 aa15.03■□□□□ -0
PNKP-221ENST00000627317 THAP10Q9P2Z0 257 aaPredicted RBP15.03■□□□□ -0
PNKP-221ENST00000627317 ERVW-1Q9UQF0 538 aa15.03■□□□□ -0
PNKP-221ENST00000627317 MYO18AQ92614 2054 aaKnown RBP15.03■□□□□ -0
PNKP-221ENST00000627317 MUC22E2RYF6 1773 aaPredicted RBP15.03■□□□□ -0
PNKP-221ENST00000627317 TCRBV21S2A2A0A5A6 115 aa15.02■□□□□ -0
PNKP-221ENST00000627317 DDX3YO15523 660 aaKnown RBP15.02■□□□□ -0
PNKP-221ENST00000627317 MFSD11O43934 449 aa15.02■□□□□ -0
PNKP-221ENST00000627317 SRPRAP08240 638 aaKnown RBP15.02■□□□□ -0
PNKP-221ENST00000627317 HOXB2P14652 356 aa15.02■□□□□ -0
PNKP-221ENST00000627317 GABRG2P18507 467 aa15.02■□□□□ -0
PNKP-221ENST00000627317 BCKDHBP21953 392 aa15.02■□□□□ -0
PNKP-221ENST00000627317 GLDCP23378 1020 aa15.02■□□□□ -0
PNKP-221ENST00000627317 NNMTP40261 264 aa15.02■□□□□ -0
PNKP-221ENST00000627317 P2RY2P41231 377 aa15.02■□□□□ -0
PNKP-221ENST00000627317 STK19P49842 368 aaPredicted RBP15.02■□□□□ -0
PNKP-221ENST00000627317 PEX5P50542 639 aa15.02■□□□□ -0
PNKP-221ENST00000627317 GEMIN4P57678 1058 aaKnown RBP15.02■□□□□ -0
PNKP-221ENST00000627317 DYNLT1P63172 113 aa15.02■□□□□ -0
PNKP-221ENST00000627317 SPEM2Q0P670 501 aa15.02■□□□□ -0
PNKP-221ENST00000627317 PAFAH1B3Q15102 231 aaKnown RBP15.02■□□□□ -0
PNKP-221ENST00000627317 LLGL1Q15334 1064 aa15.02■□□□□ -0
PNKP-221ENST00000627317 PPP2R5EQ16537 467 aa15.02■□□□□ -0
PNKP-221ENST00000627317 TAZQ16635 292 aa15.02■□□□□ -0
PNKP-221ENST00000627317 MAP7D1Q3KQU3 841 aa15.02■□□□□ -0
PNKP-221ENST00000627317 TFDP3Q5H9I0 405 aa15.02■□□□□ -0
PNKP-221ENST00000627317 ZNF569Q5MCW4 686 aa15.02■□□□□ -0
PNKP-221ENST00000627317 PLA2G2CQ5R387 149 aa15.02■□□□□ -0
PNKP-221ENST00000627317 MEI1Q5TIA1 1274 aa15.02■□□□□ -0
PNKP-221ENST00000627317 AFMIDQ63HM1 303 aa15.02■□□□□ -0
PNKP-221ENST00000627317 KAZNQ674X7 775 aa15.02■□□□□ -0
PNKP-221ENST00000627317 NCBP2-AS2Q69YL0 99 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms