RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 XYLT1Q86Y38 959 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 TMPRSS6Q8IU80 811 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 TMEFF1Q8IYR6 380 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 CFAP52Q8N1V2 620 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.6□□□□□ -1.35
TCF4-249ENST00000625716 ZNF397Q8NF99 534 aaPredicted RBP6.6□□□□□ -1.35
TCF4-249ENST00000625716 OLIG1Q8TAK6 271 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 NETO1Q8TDF5 533 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 PIGKQ92643 395 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 PRCCQ92733 491 aaPredicted RBP6.6□□□□□ -1.35
TCF4-249ENST00000625716 SIPA1Q96FS4 1042 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 RPRD1AQ96P16 312 aaPredicted RBP6.6□□□□□ -1.35
TCF4-249ENST00000625716 ADAM19Q9H013 955 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 SIK2Q9H0K1 926 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 GANQ9H2C0 597 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 WDCPQ9H6R7 721 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 PARD6AQ9NPB6 346 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 CALCOCO1Q9P1Z2 691 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 KIAA1522Q9P206 1035 aaPredicted RBP6.6□□□□□ -1.35
TCF4-249ENST00000625716 SALL4Q9UJQ4 1053 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 CYP8B1Q9UNU6 501 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 SIK3Q9Y2K2 1263 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.59□□□□□ -1.35
TCF4-249ENST00000625716 FAM170AA1A519 330 aa6.59□□□□□ -1.35
TCF4-249ENST00000625716 SYCE3A1L190 88 aa6.59□□□□□ -1.35
TCF4-249ENST00000625716 BCLAF3A2AJT9 711 aaKnown RBP6.59□□□□□ -1.35
TCF4-249ENST00000625716 GOLGA6L19H0YKK7 550 aa6.59□□□□□ -1.35
TCF4-249ENST00000625716 RNASEH1O60930 286 aaKnown RBP6.59□□□□□ -1.35
TCF4-249ENST00000625716 PAGE1O75459 146 aa6.59□□□□□ -1.35
TCF4-249ENST00000625716 SMNDC1O75940 238 aaKnown RBP eCLIP6.59□□□□□ -1.35
TCF4-249ENST00000625716 IGLV3-25P01717 112 aa6.59□□□□□ -1.35
TCF4-249ENST00000625716 DNTTP04053 509 aa6.59□□□□□ -1.35
TCF4-249ENST00000625716 ATP1A3P13637 1013 aa6.59□□□□□ -1.35
TCF4-249ENST00000625716 HLA-EP13747 358 aa6.59□□□□□ -1.35
TCF4-249ENST00000625716 FERP16591 822 aa6.59□□□□□ -1.35
TCF4-249ENST00000625716 DESP17661 470 aa6.59□□□□□ -1.35
TCF4-249ENST00000625716 BCKDHBP21953 392 aa6.59□□□□□ -1.35
TCF4-249ENST00000625716 CD6P30203 668 aa6.59□□□□□ -1.35
TCF4-249ENST00000625716 OXTRP30559 389 aa6.59□□□□□ -1.35
TCF4-249ENST00000625716 CD70P32970 193 aa6.59□□□□□ -1.35
TCF4-249ENST00000625716 SGSHP51688 502 aa6.59□□□□□ -1.35
TCF4-249ENST00000625716 JAM2P57087 298 aa6.59□□□□□ -1.35
TCF4-249ENST00000625716 NOMO3P69849 1222 aa6.59□□□□□ -1.35
TCF4-249ENST00000625716 PITX1P78337 314 aaPredicted RBP6.59□□□□□ -1.35
TCF4-249ENST00000625716 SULT2A1Q06520 285 aa6.59□□□□□ -1.35
TCF4-249ENST00000625716 LMAN2Q12907 356 aa6.59□□□□□ -1.35
TCF4-249ENST00000625716 ZNF177Q13360 481 aaPredicted RBP6.59□□□□□ -1.35
TCF4-249ENST00000625716 SLC12A1Q13621 1099 aa6.59□□□□□ -1.35
TCF4-249ENST00000625716 NCAPHQ15003 741 aa6.59□□□□□ -1.35
TCF4-249ENST00000625716 SF3A2Q15428 464 aaKnown RBP6.59□□□□□ -1.35
TCF4-249ENST00000625716 SKOR2Q2VWA4 1001 aaPredicted RBP6.59□□□□□ -1.35
TCF4-249ENST00000625716 ARL13BQ3SXY8 428 aa6.59□□□□□ -1.35
TCF4-249ENST00000625716 SLC25A52Q3SY17 297 aa6.59□□□□□ -1.35
TCF4-249ENST00000625716 FUT11Q495W5 492 aa6.59□□□□□ -1.35
TCF4-249ENST00000625716 WDR45BQ5MNZ6 344 aa6.59□□□□□ -1.35
TCF4-249ENST00000625716 BRMS1LQ5PSV4 323 aa6.59□□□□□ -1.35
TCF4-249ENST00000625716 SYCP2LQ5T4T6 812 aa6.59□□□□□ -1.35
TCF4-249ENST00000625716 LYSMD4Q5XG99 296 aa6.59□□□□□ -1.35
TCF4-249ENST00000625716 TMEM215Q68D42 235 aa6.59□□□□□ -1.35
TCF4-249ENST00000625716 KIAA1211LQ6NV74 962 aa6.59□□□□□ -1.35
TCF4-249ENST00000625716 MMS22LQ6ZRQ5 1243 aa6.59□□□□□ -1.35
TCF4-249ENST00000625716 ERMP1Q7Z2K6 904 aa6.59□□□□□ -1.35
TCF4-249ENST00000625716 RABEPKQ7Z6M1 372 aa6.59□□□□□ -1.35
TCF4-249ENST00000625716 KIAA0907Q7Z7F0 614 aaPredicted RBP6.59□□□□□ -1.35
TCF4-249ENST00000625716 ADIPOR2Q86V24 386 aa6.59□□□□□ -1.35
TCF4-249ENST00000625716 SYT12Q8IV01 421 aa6.59□□□□□ -1.35
TCF4-249ENST00000625716 DEFB119Q8N690 84 aa6.59□□□□□ -1.35
TCF4-249ENST00000625716 CYB5D2Q8WUJ1 264 aa6.59□□□□□ -1.35
TCF4-249ENST00000625716 SLC20A1Q8WUM9 679 aa6.59□□□□□ -1.35
TCF4-249ENST00000625716 SORCS1Q8WY21 1168 aa6.59□□□□□ -1.35
TCF4-249ENST00000625716 DDX1Q92499 740 aaKnown RBP6.59□□□□□ -1.35
TCF4-249ENST00000625716 RMDN1Q96DB5 314 aa6.59□□□□□ -1.35
TCF4-249ENST00000625716 P2RY11Q96G91 374 aa6.59□□□□□ -1.35
TCF4-249ENST00000625716 MRGPRX1Q96LB2 322 aa6.59□□□□□ -1.35
TCF4-249ENST00000625716 PRICKLE1Q96MT3 831 aaPredicted RBP6.59□□□□□ -1.35
TCF4-249ENST00000625716 ERGIC2Q96RQ1 377 aa6.59□□□□□ -1.35
TCF4-249ENST00000625716 RTKNQ9BST9 563 aa6.59□□□□□ -1.35
TCF4-249ENST00000625716 TKTL2Q9H0I9 626 aa6.59□□□□□ -1.35
TCF4-249ENST00000625716 FBRSQ9HAH7 460 aa6.59□□□□□ -1.35
TCF4-249ENST00000625716 ADAM22Q9P0K1 906 aa6.59□□□□□ -1.35
TCF4-249ENST00000625716 XPO7Q9UIA9 1087 aaKnown RBP6.59□□□□□ -1.35
TCF4-249ENST00000625716 NCKAP1Q9Y2A7 1128 aa6.59□□□□□ -1.35
TCF4-249ENST00000625716 RAXQ9Y2V3 346 aa6.59□□□□□ -1.35
TCF4-249ENST00000625716 FANCMQ8IYD8 2048 aa6.59□□□□□ -1.36
TCF4-249ENST00000625716 PIEZO1Q92508 2521 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 WDFY4Q6ZS81 3184 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 IGHV1OR15-9A0A0B4J2B8 117 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 A0A1B0GVM2 712 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 TCAF2A6NFQ2 919 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 A6NHS1 94 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 MEI4A8MW99 385 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 EPHB6O15197 1021 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 CLDN11O75508 207 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 CYP1A1P04798 512 aaPredicted RBP6.58□□□□□ -1.36
TCF4-249ENST00000625716 CALB1P05937 261 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 SRPRAP08240 638 aaKnown RBP6.58□□□□□ -1.36
TCF4-249ENST00000625716 GNSP15586 552 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 PDGFRAP16234 1089 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 TNFAIP3P21580 790 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 TGM1P22735 817 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms