RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 A0A1W2PQ27 194 aa14.27□□□□□ -0.13
SNX1-214ENST00000625244 A0A1W2PQ64 194 aa14.27□□□□□ -0.13
SNX1-214ENST00000625244 A0A1W2PQC6 194 aa14.27□□□□□ -0.13
SNX1-214ENST00000625244 A1L4Q6 167 aa14.27□□□□□ -0.13
SNX1-214ENST00000625244 C9orf172C9J069 976 aa14.27□□□□□ -0.13
SNX1-214ENST00000625244 TMX2-CTNND1H3BSU7 103 aa14.27□□□□□ -0.13
SNX1-214ENST00000625244 RAD51BO15315 384 aa14.27□□□□□ -0.13
SNX1-214ENST00000625244 CCKBRP32239 447 aa14.27□□□□□ -0.13
SNX1-214ENST00000625244 PIK3CAP42336 1068 aa14.27□□□□□ -0.13
SNX1-214ENST00000625244 CCL7P80098 99 aa14.27□□□□□ -0.13
SNX1-214ENST00000625244 ADIGQ0VDE8 80 aa14.27□□□□□ -0.13
SNX1-214ENST00000625244 C1orf61Q13536 156 aa14.27□□□□□ -0.13
SNX1-214ENST00000625244 FGL2Q14314 439 aa14.27□□□□□ -0.13
SNX1-214ENST00000625244 FAM26FQ5R3K3 315 aa14.27□□□□□ -0.13
SNX1-214ENST00000625244 MSANTD2Q6P1R3 559 aa14.27□□□□□ -0.13
SNX1-214ENST00000625244 KYAT3Q6YP21 454 aaKnown RBP14.27□□□□□ -0.13
SNX1-214ENST00000625244 RBFAQ8N0V3 343 aa14.27□□□□□ -0.13
SNX1-214ENST00000625244 ANKRD52Q8NB46 1076 aa14.27□□□□□ -0.13
SNX1-214ENST00000625244 C9orf43Q8TAL5 461 aaPredicted RBP14.27□□□□□ -0.13
SNX1-214ENST00000625244 FAM174AQ8TBP5 190 aa14.27□□□□□ -0.13
SNX1-214ENST00000625244 GLMNQ92990 594 aa14.27□□□□□ -0.13
SNX1-214ENST00000625244 TATDN2Q93075 761 aa14.27□□□□□ -0.13
SNX1-214ENST00000625244 PHF12Q96QT6 1004 aa14.27□□□□□ -0.13
SNX1-214ENST00000625244 GFM1Q96RP9 751 aaKnown RBP14.27□□□□□ -0.13
SNX1-214ENST00000625244 ABCC13Q9NSE7 274 aa14.27□□□□□ -0.13
SNX1-214ENST00000625244 TFIP11Q9UBB9 837 aaKnown RBP14.27□□□□□ -0.13
SNX1-214ENST00000625244 SRPRBQ9Y5M8 271 aaKnown RBP14.27□□□□□ -0.13
SNX1-214ENST00000625244 DNHD1Q96M86 4753 aa14.27□□□□□ -0.13
SNX1-214ENST00000625244 A0A1W2PQM1 296 aa14.26□□□□□ -0.13
SNX1-214ENST00000625244 RNF103O00237 685 aa14.26□□□□□ -0.13
SNX1-214ENST00000625244 MCF2LO15068 1137 aa14.26□□□□□ -0.13
SNX1-214ENST00000625244 CTSLP07711 333 aa14.26□□□□□ -0.13
SNX1-214ENST00000625244 ZNF18P17022 549 aa14.26□□□□□ -0.13
SNX1-214ENST00000625244 COL8A1P27658 744 aa14.26□□□□□ -0.13
SNX1-214ENST00000625244 TNFRSF8P28908 595 aa14.26□□□□□ -0.13
SNX1-214ENST00000625244 ADKP55263 362 aaKnown RBP14.26□□□□□ -0.13
SNX1-214ENST00000625244 TBX4P57082 545 aa14.26□□□□□ -0.13
SNX1-214ENST00000625244 EIF2B5Q13144 721 aaKnown RBP14.26□□□□□ -0.13
SNX1-214ENST00000625244 PDE1CQ14123 709 aaPredicted RBP14.26□□□□□ -0.13
SNX1-214ENST00000625244 ACCSLQ4AC99 568 aa14.26□□□□□ -0.13
SNX1-214ENST00000625244 TMEM259Q4ZIN3 620 aa14.26□□□□□ -0.13
SNX1-214ENST00000625244 C1orf220Q5T0J3 134 aa14.26□□□□□ -0.13
SNX1-214ENST00000625244 Q6ZVU0 165 aa14.26□□□□□ -0.13
SNX1-214ENST00000625244 SDR16C5Q8N3Y7 309 aa14.26□□□□□ -0.13
SNX1-214ENST00000625244 SLC4A11Q8NBS3 891 aa14.26□□□□□ -0.13
SNX1-214ENST00000625244 IPO9Q96P70 1041 aaKnown RBP14.26□□□□□ -0.13
SNX1-214ENST00000625244 IPO11Q9UI26 975 aaKnown RBP14.26□□□□□ -0.13
SNX1-214ENST00000625244 PDZD2O15018 2839 aa14.26□□□□□ -0.13
SNX1-214ENST00000625244 MED13Q9UHV7 2174 aa14.26□□□□□ -0.13
SNX1-214ENST00000625244 LMO7DNF2Z398 122 aa14.25□□□□□ -0.13
SNX1-214ENST00000625244 YY2O15391 372 aa14.25□□□□□ -0.13
SNX1-214ENST00000625244 ATP9BO43861 1147 aa14.25□□□□□ -0.13
SNX1-214ENST00000625244 BNIP3LO60238 219 aa14.25□□□□□ -0.13
SNX1-214ENST00000625244 PCDH8O95206 1070 aa14.25□□□□□ -0.13
SNX1-214ENST00000625244 CD2BP2O95400 341 aaKnown RBP14.25□□□□□ -0.13
SNX1-214ENST00000625244 PAK4O96013 591 aaPredicted RBP14.25□□□□□ -0.13
SNX1-214ENST00000625244 RPLP0P05388 317 aaKnown RBP14.25□□□□□ -0.13
SNX1-214ENST00000625244 HSP90AA1P07900 732 aaKnown RBP14.25□□□□□ -0.13
SNX1-214ENST00000625244 KRT7P08729 469 aa14.25□□□□□ -0.13
SNX1-214ENST00000625244 PDGFRAP16234 1089 aa14.25□□□□□ -0.13
SNX1-214ENST00000625244 ELAVL4P26378 380 aaKnown RBP14.25□□□□□ -0.13
SNX1-214ENST00000625244 MLLT10P55197 1068 aa14.25□□□□□ -0.13
SNX1-214ENST00000625244 PRRT3Q5FWE3 981 aa14.25□□□□□ -0.13
SNX1-214ENST00000625244 FHL5Q5TD97 284 aa14.25□□□□□ -0.13
SNX1-214ENST00000625244 ARHGAP17Q68EM7 881 aa14.25□□□□□ -0.13
SNX1-214ENST00000625244 TICAM1Q8IUC6 712 aa14.25□□□□□ -0.13
SNX1-214ENST00000625244 PDILTQ8N807 584 aa14.25□□□□□ -0.13
SNX1-214ENST00000625244 SSC4DQ8WTU2 575 aa14.25□□□□□ -0.13
SNX1-214ENST00000625244 CCDC74AQ96AQ1 378 aa14.25□□□□□ -0.13
SNX1-214ENST00000625244 FCRL2Q96LA5 508 aaPredicted RBP14.25□□□□□ -0.13
SNX1-214ENST00000625244 TMEM74Q96NL1 305 aa14.25□□□□□ -0.13
SNX1-214ENST00000625244 DDX50Q9BQ39 737 aaKnown RBP14.25□□□□□ -0.13
SNX1-214ENST00000625244 NIF3L1Q9GZT8 377 aa14.25□□□□□ -0.13
SNX1-214ENST00000625244 LRRC4Q9HBW1 653 aa14.25□□□□□ -0.13
SNX1-214ENST00000625244 CGNQ9P2M7 1197 aaKnown RBP14.25□□□□□ -0.13
SNX1-214ENST00000625244 SPASTQ9UBP0 616 aa14.25□□□□□ -0.13
SNX1-214ENST00000625244 XPO7Q9UIA9 1087 aaKnown RBP14.25□□□□□ -0.13
SNX1-214ENST00000625244 PNMA8BQ9ULN7 279 aaPredicted RBP14.25□□□□□ -0.13
SNX1-214ENST00000625244 SMC3Q9UQE7 1217 aa14.25□□□□□ -0.13
SNX1-214ENST00000625244 F8P00451 2351 aa14.24□□□□□ -0.13
SNX1-214ENST00000625244 VPS37CA5D8V6 355 aaPredicted RBP14.24□□□□□ -0.13
SNX1-214ENST00000625244 K7ELQ4 463 aaPredicted RBP14.24□□□□□ -0.13
SNX1-214ENST00000625244 XPO1O14980 1071 aaKnown RBP14.24□□□□□ -0.13
SNX1-214ENST00000625244 ALOX15BO15296 676 aa14.24□□□□□ -0.13
SNX1-214ENST00000625244 CD82P27701 267 aa14.24□□□□□ -0.13
SNX1-214ENST00000625244 NOS2P35228 1153 aa14.24□□□□□ -0.13
SNX1-214ENST00000625244 DCTP40126 519 aa14.24□□□□□ -0.13
SNX1-214ENST00000625244 RABIFP47224 123 aa14.24□□□□□ -0.13
SNX1-214ENST00000625244 MAPK10P53779 464 aa14.24□□□□□ -0.13
SNX1-214ENST00000625244 RAD23BP54727 409 aa14.24□□□□□ -0.13
SNX1-214ENST00000625244 OXCT1P55809 520 aa14.24□□□□□ -0.13
SNX1-214ENST00000625244 SLC8A3P57103 927 aa14.24□□□□□ -0.13
SNX1-214ENST00000625244 SULT2A1Q06520 285 aa14.24□□□□□ -0.13
SNX1-214ENST00000625244 DLG2Q15700 870 aa14.24□□□□□ -0.13
SNX1-214ENST00000625244 ESRP1Q6NXG1 681 aaKnown RBP14.24□□□□□ -0.13
SNX1-214ENST00000625244 LGI2Q8N0V4 545 aa14.24□□□□□ -0.13
SNX1-214ENST00000625244 SNX21Q969T3 373 aa14.24□□□□□ -0.13
SNX1-214ENST00000625244 LRRC61Q9BV99 259 aa14.24□□□□□ -0.13
SNX1-214ENST00000625244 SLC17A9Q9BYT1 436 aa14.24□□□□□ -0.13
SNX1-214ENST00000625244 CPEB1Q9BZB8 566 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms