RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 SDR42E2A6NKP2 422 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 POP4O95707 220 aaKnown RBP9.24□□□□□ -0.93
HDAC9-229ENST00000622668 OR56A5P0C7T3 313 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 AKT2P31751 481 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 HSPA9P38646 679 aaKnown RBP9.24□□□□□ -0.93
HDAC9-229ENST00000622668 RPL6Q02878 288 aaKnown RBP9.24□□□□□ -0.93
HDAC9-229ENST00000622668 PRKCQQ04759 706 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 NPNTQ6UXI9 565 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 C3orf62Q6ZUJ4 267 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 XYLT1Q86Y38 959 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 BBS7Q8IWZ6 715 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 PPIL6Q8IXY8 311 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 NRSN1Q8IZ57 195 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 MYO1HQ8N1T3 1032 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 STK32AQ8WU08 396 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 ATOH1Q92858 354 aaPredicted RBP9.24□□□□□ -0.93
HDAC9-229ENST00000622668 USP15Q9Y4E8 981 aaPredicted RBP9.24□□□□□ -0.93
HDAC9-229ENST00000622668 PCDHGC4Q9Y5F7 938 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 GRIN2DO15399 1336 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 GRID2IPA4D2P6 1211 aa9.23□□□□□ -0.93
HDAC9-229ENST00000622668 C2orf78A6NCI8 922 aa9.23□□□□□ -0.93
HDAC9-229ENST00000622668 NCF1BA6NI72 391 aaPredicted RBP9.23□□□□□ -0.93
HDAC9-229ENST00000622668 NCF1CA8MVU1 366 aaPredicted RBP9.23□□□□□ -0.93
HDAC9-229ENST00000622668 IRAK2O43187 625 aa9.23□□□□□ -0.93
HDAC9-229ENST00000622668 OPHN1O60890 802 aa9.23□□□□□ -0.93
HDAC9-229ENST00000622668 NCF1P14598 390 aaPredicted RBP9.23□□□□□ -0.93
HDAC9-229ENST00000622668 ZCWPW2Q504Y3 356 aa9.23□□□□□ -0.93
HDAC9-229ENST00000622668 MORC2Q9Y6X9 1032 aaPredicted RBP9.23□□□□□ -0.93
HDAC9-229ENST00000622668 A0A087WUV0 522 aaPredicted RBP9.23□□□□□ -0.93
HDAC9-229ENST00000622668 CCDC151A5D8V7 595 aa9.23□□□□□ -0.93
HDAC9-229ENST00000622668 C2orf71A6NGG8 1288 aa9.23□□□□□ -0.93
HDAC9-229ENST00000622668 H3BNC9 293 aa9.23□□□□□ -0.93
HDAC9-229ENST00000622668 COCHO43405 550 aa9.23□□□□□ -0.93
HDAC9-229ENST00000622668 CDK14O94921 469 aa9.23□□□□□ -0.93
HDAC9-229ENST00000622668 PCCBP05166 539 aa9.23□□□□□ -0.93
HDAC9-229ENST00000622668 NFKB1P19838 968 aa9.23□□□□□ -0.93
HDAC9-229ENST00000622668 EIF2B5Q13144 721 aaKnown RBP9.23□□□□□ -0.93
HDAC9-229ENST00000622668 GALNT3Q14435 633 aa9.23□□□□□ -0.93
HDAC9-229ENST00000622668 GRIN2CQ14957 1233 aa9.23□□□□□ -0.93
HDAC9-229ENST00000622668 PPP4R4Q6NUP7 873 aa9.23□□□□□ -0.93
HDAC9-229ENST00000622668 CRELD2Q6UXH1 353 aaPredicted RBP9.23□□□□□ -0.93
HDAC9-229ENST00000622668 HFE2Q6ZVN8 426 aa9.23□□□□□ -0.93
HDAC9-229ENST00000622668 LNX1Q8TBB1 728 aaPredicted RBP9.23□□□□□ -0.93
HDAC9-229ENST00000622668 ZCWPW1Q9H0M4 648 aa9.23□□□□□ -0.93
HDAC9-229ENST00000622668 COPS7BQ9H9Q2 264 aaPredicted RBP9.23□□□□□ -0.93
HDAC9-229ENST00000622668 DNAJC28Q9NX36 388 aa9.23□□□□□ -0.93
HDAC9-229ENST00000622668 GGT7Q9UJ14 662 aa9.23□□□□□ -0.93
HDAC9-229ENST00000622668 COL4A5P29400 1685 aa9.23□□□□□ -0.93
HDAC9-229ENST00000622668 LRRC10BA6NIK2 292 aa9.23□□□□□ -0.93
HDAC9-229ENST00000622668 GOLGA8KD6RF30 607 aa9.23□□□□□ -0.93
HDAC9-229ENST00000622668 GOLGA8TH3BQL2 631 aa9.23□□□□□ -0.93
HDAC9-229ENST00000622668 FPGTO14772 594 aa9.23□□□□□ -0.93
HDAC9-229ENST00000622668 VAPBO95292 243 aa9.23□□□□□ -0.93
HDAC9-229ENST00000622668 COILP38432 576 aaPredicted RBP9.23□□□□□ -0.93
HDAC9-229ENST00000622668 PRKCIP41743 596 aa9.23□□□□□ -0.93
HDAC9-229ENST00000622668 ATXN1P54253 815 aaKnown RBP9.23□□□□□ -0.93
HDAC9-229ENST00000622668 HIST2H2ACQ16777 129 aaPredicted RBP9.23□□□□□ -0.93
HDAC9-229ENST00000622668 WDR45BQ5MNZ6 344 aa9.23□□□□□ -0.93
HDAC9-229ENST00000622668 ATXN7L2Q5T6C5 722 aaPredicted RBP9.23□□□□□ -0.93
HDAC9-229ENST00000622668 HIST2H2AA3Q6FI13 130 aa9.23□□□□□ -0.93
HDAC9-229ENST00000622668 FAM109BQ6ICB4 259 aaPredicted RBP9.23□□□□□ -0.93
HDAC9-229ENST00000622668 Q6ZVU0 165 aa9.23□□□□□ -0.93
HDAC9-229ENST00000622668 LRRC49Q8IUZ0 686 aa9.23□□□□□ -0.93
HDAC9-229ENST00000622668 DDIASQ8IXT1 998 aa9.23□□□□□ -0.93
HDAC9-229ENST00000622668 TCEAL8Q8IYN2 117 aa9.23□□□□□ -0.93
HDAC9-229ENST00000622668 FAM71BQ8TC56 605 aa9.23□□□□□ -0.93
HDAC9-229ENST00000622668 RNF157Q96PX1 679 aa9.23□□□□□ -0.93
HDAC9-229ENST00000622668 IARS2Q9NSE4 1012 aaKnown RBP9.23□□□□□ -0.93
HDAC9-229ENST00000622668 IMP3Q9NV31 184 aaKnown RBP9.23□□□□□ -0.93
HDAC9-229ENST00000622668 INTS9Q9NV88 658 aaKnown RBP9.23□□□□□ -0.93
HDAC9-229ENST00000622668 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.23□□□□□ -0.93
HDAC9-229ENST00000622668 GGA2Q9UJY4 613 aa9.23□□□□□ -0.93
HDAC9-229ENST00000622668 DRG1Q9Y295 367 aaKnown RBP9.23□□□□□ -0.93
HDAC9-229ENST00000622668 LY75O60449 1722 aa9.23□□□□□ -0.93
HDAC9-229ENST00000622668 TCRBV21S2A2A0A5A6 115 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 TMEM247A6NEH6 219 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 EIF2S1P05198 315 aaKnown RBP9.22□□□□□ -0.93
HDAC9-229ENST00000622668 SERPINH1P50454 418 aaKnown RBP9.22□□□□□ -0.93
HDAC9-229ENST00000622668 CDK7P50613 346 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 ITGA8P53708 1063 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 IL9RQ01113 521 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 PUS10Q3MIT2 529 aaKnown RBP9.22□□□□□ -0.93
HDAC9-229ENST00000622668 PARP15Q460N3 678 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 ZNF776Q68DI1 518 aaPredicted RBP9.22□□□□□ -0.93
HDAC9-229ENST00000622668 CES3Q6UWW8 571 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 TMPRSS6Q8IU80 811 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 TXNDC5Q8NBS9 432 aaKnown RBP9.22□□□□□ -0.93
HDAC9-229ENST00000622668 WHAMMQ8TF30 809 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 AP2M1Q96CW1 435 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 MYO19Q96H55 970 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 CFHR5Q9BXR6 569 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 MAGEH1Q9H213 219 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 HEBP1Q9NRV9 189 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 SCML2Q9UQR0 700 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 TIMM44O43615 452 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 H2AFYO75367 372 aaKnown RBP9.22□□□□□ -0.93
HDAC9-229ENST00000622668 OAZ2O95190 189 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 GTF2F1P35269 517 aaKnown RBP eCLIP9.22□□□□□ -0.93
HDAC9-229ENST00000622668 GPD2P43304 727 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 CXCL12P48061 93 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms