RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 WDR59Q6PJI9 974 aa17.57■□□□□ 0.4
HMGN3-203ENST00000620514 MON1BQ7L1V2 547 aa17.57■□□□□ 0.4
HMGN3-203ENST00000620514 FAM72BQ86X60 149 aa17.57■□□□□ 0.4
HMGN3-203ENST00000620514 DRC7Q8IY82 874 aa17.57■□□□□ 0.4
HMGN3-203ENST00000620514 TBC1D3Q8IZP1 549 aaPredicted RBP17.57■□□□□ 0.4
HMGN3-203ENST00000620514 CCDC185Q8N715 623 aa17.57■□□□□ 0.4
HMGN3-203ENST00000620514 CHST14Q8NCH0 376 aa17.57■□□□□ 0.4
HMGN3-203ENST00000620514 FAM172AQ8WUF8 416 aa17.57■□□□□ 0.4
HMGN3-203ENST00000620514 CENPIQ92674 756 aaPredicted RBP17.57■□□□□ 0.4
HMGN3-203ENST00000620514 SELENOOQ9BVL4 669 aa17.57■□□□□ 0.4
HMGN3-203ENST00000620514 OR12D3Q9UGF7 316 aa17.57■□□□□ 0.4
HMGN3-203ENST00000620514 BTBD3Q9Y2F9 522 aa17.57■□□□□ 0.4
HMGN3-203ENST00000620514 PCDHB9Q9Y5E1 797 aa17.57■□□□□ 0.4
HMGN3-203ENST00000620514 TCRBV5S1A1TA0A578 114 aa17.56■□□□□ 0.4
HMGN3-203ENST00000620514 ILVBLA1L0T0 632 aa17.56■□□□□ 0.4
HMGN3-203ENST00000620514 C1QTNF9BB2RNN3 333 aa17.56■□□□□ 0.4
HMGN3-203ENST00000620514 C1QTNF3-AMACRE9PGA6 284 aa17.56■□□□□ 0.4
HMGN3-203ENST00000620514 CBX4O00257 560 aa17.56■□□□□ 0.4
HMGN3-203ENST00000620514 VILLO15195 856 aa17.56■□□□□ 0.4
HMGN3-203ENST00000620514 PLRG1O43660 514 aaKnown RBP17.56■□□□□ 0.4
HMGN3-203ENST00000620514 ZMPSTE24O75844 475 aa17.56■□□□□ 0.4
HMGN3-203ENST00000620514 CALB1P05937 261 aa17.56■□□□□ 0.4
HMGN3-203ENST00000620514 C1QTNF9P0C862 333 aa17.56■□□□□ 0.4
HMGN3-203ENST00000620514 GPD1P21695 349 aa17.56■□□□□ 0.4
HMGN3-203ENST00000620514 PRAMEF14Q5SWL7 426 aa17.56■□□□□ 0.4
HMGN3-203ENST00000620514 MANEALQ5VSG8 457 aa17.56■□□□□ 0.4
HMGN3-203ENST00000620514 AGBL4Q5VU57 503 aa17.56■□□□□ 0.4
HMGN3-203ENST00000620514 STRADAQ7RTN6 431 aa17.56■□□□□ 0.4
HMGN3-203ENST00000620514 CHCHD4Q8N4Q1 142 aa17.56■□□□□ 0.4
HMGN3-203ENST00000620514 OR2A12Q8NGT7 310 aa17.56■□□□□ 0.4
HMGN3-203ENST00000620514 BPIFA3Q9BQP9 254 aa17.56■□□□□ 0.4
HMGN3-203ENST00000620514 ACE2Q9BYF1 805 aaPredicted RBP17.56■□□□□ 0.4
HMGN3-203ENST00000620514 NAT10Q9H0A0 1025 aaKnown RBP17.56■□□□□ 0.4
HMGN3-203ENST00000620514 TNKS2Q9H2K2 1166 aa17.56■□□□□ 0.4
HMGN3-203ENST00000620514 RTN4Q9NQC3 1192 aaKnown RBP17.56■□□□□ 0.4
HMGN3-203ENST00000620514 AASDHPPTQ9NRN7 309 aa17.56■□□□□ 0.4
HMGN3-203ENST00000620514 NDFIP2Q9NV92 336 aa17.56■□□□□ 0.4
HMGN3-203ENST00000620514 PPARGC1AQ9UBK2 798 aaKnown RBP17.56■□□□□ 0.4
HMGN3-203ENST00000620514 NEU3Q9UQ49 428 aa17.56■□□□□ 0.4
HMGN3-203ENST00000620514 ACTL7AQ9Y615 435 aa17.56■□□□□ 0.4
HMGN3-203ENST00000620514 A0A1W2PR77 199 aa17.55■□□□□ 0.4
HMGN3-203ENST00000620514 SLC7A4O43246 635 aa17.55■□□□□ 0.4
HMGN3-203ENST00000620514 FTH1P19P0C7X4 201 aa17.55■□□□□ 0.4
HMGN3-203ENST00000620514 MAT2AP31153 395 aaKnown RBP17.55■□□□□ 0.4
HMGN3-203ENST00000620514 CHRNA3P32297 505 aa17.55■□□□□ 0.4
HMGN3-203ENST00000620514 ACVRL1P37023 503 aa17.55■□□□□ 0.4
HMGN3-203ENST00000620514 C21orf59P57076 290 aa17.55■□□□□ 0.4
HMGN3-203ENST00000620514 IL9RQ01113 521 aa17.55■□□□□ 0.4
HMGN3-203ENST00000620514 NRG1Q02297 640 aaPredicted RBP17.55■□□□□ 0.4
HMGN3-203ENST00000620514 GNA12Q03113 381 aa17.55■□□□□ 0.4
HMGN3-203ENST00000620514 ZNF423Q2M1K9 1284 aa17.55■□□□□ 0.4
HMGN3-203ENST00000620514 ARL13BQ3SXY8 428 aa17.55■□□□□ 0.4
HMGN3-203ENST00000620514 RWDD4Q6NW29 188 aaKnown RBP17.55■□□□□ 0.4
HMGN3-203ENST00000620514 C22orf39Q6P5X5 142 aa17.55■□□□□ 0.4
HMGN3-203ENST00000620514 ZNF783Q6ZMS7 281 aa17.55■□□□□ 0.4
HMGN3-203ENST00000620514 DBX2Q6ZNG2 339 aa17.55■□□□□ 0.4
HMGN3-203ENST00000620514 IRF2BP2Q7Z5L9 587 aa17.55■□□□□ 0.4
HMGN3-203ENST00000620514 PNPLA1Q8N8W4 532 aa17.55■□□□□ 0.4
HMGN3-203ENST00000620514 C3orf20Q8ND61 904 aa17.55■□□□□ 0.4
HMGN3-203ENST00000620514 BAP1Q92560 729 aa17.55■□□□□ 0.4
HMGN3-203ENST00000620514 ARRDC3Q96B67 414 aa17.55■□□□□ 0.4
HMGN3-203ENST00000620514 SERAC1Q96JX3 654 aa17.55■□□□□ 0.4
HMGN3-203ENST00000620514 TMEM121BQ9BXQ6 578 aaPredicted RBP17.55■□□□□ 0.4
HMGN3-203ENST00000620514 OSBPL2Q9H1P3 480 aa17.55■□□□□ 0.4
HMGN3-203ENST00000620514 ATP13A1Q9HD20 1204 aa17.55■□□□□ 0.4
HMGN3-203ENST00000620514 TAS2R14Q9NYV8 317 aa17.55■□□□□ 0.4
HMGN3-203ENST00000620514 KLK13Q9UKR3 277 aa17.55■□□□□ 0.4
HMGN3-203ENST00000620514 PCDHGB2Q9Y5G2 931 aa17.55■□□□□ 0.4
HMGN3-203ENST00000620514 CABIN1Q9Y6J0 2220 aa17.54■□□□□ 0.4
HMGN3-203ENST00000620514 SIGLEC16A6NMB1 481 aa17.54■□□□□ 0.4
HMGN3-203ENST00000620514 CCP110O43303 1012 aa17.54■□□□□ 0.4
HMGN3-203ENST00000620514 LATO43561 262 aa17.54■□□□□ 0.4
HMGN3-203ENST00000620514 ZNF821O75541 412 aaPredicted RBP17.54■□□□□ 0.4
HMGN3-203ENST00000620514 LRIG2O94898 1065 aa17.54■□□□□ 0.4
HMGN3-203ENST00000620514 PLEKP08567 350 aaPredicted RBP17.54■□□□□ 0.4
HMGN3-203ENST00000620514 FERP16591 822 aa17.54■□□□□ 0.4
HMGN3-203ENST00000620514 CD38P28907 300 aa17.54■□□□□ 0.4
HMGN3-203ENST00000620514 CLCN6P51797 869 aa17.54■□□□□ 0.4
HMGN3-203ENST00000620514 TAS2R38P59533 333 aa17.54■□□□□ 0.4
HMGN3-203ENST00000620514 RPL7AP62424 266 aaKnown RBP17.54■□□□□ 0.4
HMGN3-203ENST00000620514 ARF5P84085 180 aa17.54■□□□□ 0.4
HMGN3-203ENST00000620514 C1QBPQ07021 282 aaKnown RBP17.54■□□□□ 0.4
HMGN3-203ENST00000620514 PIP5KL1Q5T9C9 394 aa17.54■□□□□ 0.4
HMGN3-203ENST00000620514 DNAJC24Q6P3W2 148 aa17.54■□□□□ 0.4
HMGN3-203ENST00000620514 UNQ6494/PRO21346Q6UXR6 183 aa17.54■□□□□ 0.4
HMGN3-203ENST00000620514 NLRP14Q86W24 1093 aa17.54■□□□□ 0.4
HMGN3-203ENST00000620514 PYROXD2Q8N2H3 581 aa17.54■□□□□ 0.4
HMGN3-203ENST00000620514 BAHD1Q8TBE0 780 aaPredicted RBP17.54■□□□□ 0.4
HMGN3-203ENST00000620514 RHBDD1Q8TEB9 315 aa17.54■□□□□ 0.4
HMGN3-203ENST00000620514 SYT11Q9BT88 431 aa17.54■□□□□ 0.4
HMGN3-203ENST00000620514 ARHGAP20Q9P2F6 1191 aa17.54■□□□□ 0.4
HMGN3-203ENST00000620514 DNAI1Q9UI46 699 aa17.54■□□□□ 0.4
HMGN3-203ENST00000620514 FCF1Q9Y324 198 aaKnown RBP17.54■□□□□ 0.4
HMGN3-203ENST00000620514 FARP1Q9Y4F1 1045 aaPredicted RBP17.54■□□□□ 0.4
HMGN3-203ENST00000620514 CACNA1BQ00975 2339 aa17.54■□□□□ 0.4
HMGN3-203ENST00000620514 SMTNL1A8MU46 457 aa17.53■□□□□ 0.4
HMGN3-203ENST00000620514 KPNA3O00505 521 aaPredicted RBP17.53■□□□□ 0.4
HMGN3-203ENST00000620514 FLRT2O43155 660 aa17.53■□□□□ 0.4
HMGN3-203ENST00000620514 KRT37O76014 449 aa17.53■□□□□ 0.4
HMGN3-203ENST00000620514 CD160O95971 181 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms