RNA–Protein interactions for RNA: ENST00000616684.4

CDH23-212, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 4,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-212ENST00000616684 IL5RAQ01344 420 aa18.9■□□□□ 0.62
CDH23-212ENST00000616684 TRIM16LQ309B1 348 aa18.9■□□□□ 0.62
CDH23-212ENST00000616684 NETO2Q8NC67 525 aa18.9■□□□□ 0.62
CDH23-212ENST00000616684 RMND5BQ96G75 393 aaPredicted RBP18.9■□□□□ 0.62
CDH23-212ENST00000616684 NXF3Q9H4D5 531 aaKnown RBP18.9■□□□□ 0.62
CDH23-212ENST00000616684 USE1Q9NZ43 259 aa18.9■□□□□ 0.62
CDH23-212ENST00000616684 C15orf38-AP3S2A0A0A6YYH1 394 aa18.9■□□□□ 0.62
CDH23-212ENST00000616684 TCRBV7S2A1N4TA0A589 114 aa18.9■□□□□ 0.62
CDH23-212ENST00000616684 OR56A5P0C7T3 313 aa18.9■□□□□ 0.62
CDH23-212ENST00000616684 PLD1Q13393 1074 aa18.9■□□□□ 0.62
CDH23-212ENST00000616684 ARPINQ7Z6K5 226 aa18.9■□□□□ 0.62
CDH23-212ENST00000616684 CAMKK2Q96RR4 588 aa18.9■□□□□ 0.62
CDH23-212ENST00000616684 B3GNT5Q9BYG0 378 aa18.9■□□□□ 0.62
CDH23-212ENST00000616684 ROGDIQ9GZN7 287 aa18.9■□□□□ 0.62
CDH23-212ENST00000616684 LRRC4CQ9HCJ2 640 aa18.9■□□□□ 0.62
CDH23-212ENST00000616684 NID2Q14112 1375 aa18.9■□□□□ 0.62
CDH23-212ENST00000616684 A8MX80 341 aa18.9■□□□□ 0.62
CDH23-212ENST00000616684 ERBB2P04626 1255 aa18.9■□□□□ 0.62
CDH23-212ENST00000616684 IMPDH2P12268 514 aa18.9■□□□□ 0.62
CDH23-212ENST00000616684 LRPAP1P30533 357 aa18.9■□□□□ 0.62
CDH23-212ENST00000616684 SPPL2AQ8TCT8 520 aa18.9■□□□□ 0.62
CDH23-212ENST00000616684 GLMNQ92990 594 aa18.9■□□□□ 0.62
CDH23-212ENST00000616684 MRPL45Q9BRJ2 306 aaKnown RBP18.9■□□□□ 0.62
CDH23-212ENST00000616684 CNGB3Q9NQW8 809 aa18.9■□□□□ 0.62
CDH23-212ENST00000616684 OPTCQ9UBM4 332 aa18.9■□□□□ 0.62
CDH23-212ENST00000616684 ST3GAL5Q9UNP4 418 aa18.9■□□□□ 0.62
CDH23-212ENST00000616684 PTCH2Q9Y6C5 1203 aa18.9■□□□□ 0.62
CDH23-212ENST00000616684 PARNO95453 639 aaKnown RBP18.89■□□□□ 0.62
CDH23-212ENST00000616684 CRYBB1P53674 252 aaPredicted RBP18.89■□□□□ 0.62
CDH23-212ENST00000616684 STK40Q8N2I9 435 aa18.89■□□□□ 0.62
CDH23-212ENST00000616684 LRRC57Q8N9N7 239 aa18.89■□□□□ 0.62
CDH23-212ENST00000616684 SNRNP27Q8WVK2 155 aaKnown RBP18.89■□□□□ 0.62
CDH23-212ENST00000616684 GPR20Q99678 358 aa18.89■□□□□ 0.62
CDH23-212ENST00000616684 HMX1Q9NP08 348 aaPredicted RBP18.89■□□□□ 0.62
CDH23-212ENST00000616684 UXTQ9UBK9 157 aaPredicted RBP18.89■□□□□ 0.62
CDH23-212ENST00000616684 SPACA6W5XKT8 324 aa18.89■□□□□ 0.62
CDH23-212ENST00000616684 C3P01024 1663 aa18.89■□□□□ 0.61
CDH23-212ENST00000616684 KRT87PA6NCN2 255 aa18.89■□□□□ 0.61
CDH23-212ENST00000616684 C4BPAP04003 597 aaKnown RBP18.89■□□□□ 0.61
CDH23-212ENST00000616684 LBPP18428 481 aa18.89■□□□□ 0.61
CDH23-212ENST00000616684 CLK2P49760 499 aaKnown RBP18.89■□□□□ 0.61
CDH23-212ENST00000616684 MAP2K5Q13163 448 aa18.89■□□□□ 0.61
CDH23-212ENST00000616684 IL27RAQ6UWB1 636 aa18.89■□□□□ 0.61
CDH23-212ENST00000616684 SEMA3CQ99985 751 aa18.89■□□□□ 0.61
CDH23-212ENST00000616684 KRT84Q9NSB2 600 aa18.89■□□□□ 0.61
CDH23-212ENST00000616684 MYO5BQ9ULV0 1848 aa18.89■□□□□ 0.61
CDH23-212ENST00000616684 TFEBP19484 476 aa18.89■□□□□ 0.61
CDH23-212ENST00000616684 KLRC2P26717 231 aa18.89■□□□□ 0.61
CDH23-212ENST00000616684 GRIA4P48058 902 aa18.89■□□□□ 0.61
CDH23-212ENST00000616684 CLCN5P51795 746 aa18.89■□□□□ 0.61
CDH23-212ENST00000616684 HIRAP54198 1017 aaPredicted RBP18.89■□□□□ 0.61
CDH23-212ENST00000616684 PTGR2Q8N8N7 351 aaPredicted RBP18.89■□□□□ 0.61
CDH23-212ENST00000616684 P2RY11Q96G91 374 aa18.89■□□□□ 0.61
CDH23-212ENST00000616684 SENP6Q9GZR1 1112 aaPredicted RBP18.89■□□□□ 0.61
CDH23-212ENST00000616684 PAPOLBQ9NRJ5 636 aaKnown RBP18.89■□□□□ 0.61
CDH23-212ENST00000616684 IFRD1O00458 451 aaPredicted RBP18.89■□□□□ 0.61
CDH23-212ENST00000616684 ENTPD5O75356 428 aa18.89■□□□□ 0.61
CDH23-212ENST00000616684 IRGCQ6NXR0 463 aa18.89■□□□□ 0.61
CDH23-212ENST00000616684 SH3BP5LQ7L8J4 393 aa18.89■□□□□ 0.61
CDH23-212ENST00000616684 PIWIL4Q7Z3Z4 852 aaKnown RBP18.89■□□□□ 0.61
CDH23-212ENST00000616684 KCTD4Q8WVF5 259 aa18.89■□□□□ 0.61
CDH23-212ENST00000616684 BTN2A2Q8WVV5 523 aa18.89■□□□□ 0.61
CDH23-212ENST00000616684 OMDQ99983 421 aa18.89■□□□□ 0.61
CDH23-212ENST00000616684 DUSP16Q9BY84 665 aa18.89■□□□□ 0.61
CDH23-212ENST00000616684 ZYG11BQ9C0D3 744 aa18.89■□□□□ 0.61
CDH23-212ENST00000616684 BTBD7Q9P203 1132 aa18.89■□□□□ 0.61
CDH23-212ENST00000616684 FBXO5Q9UKT4 447 aa18.89■□□□□ 0.61
CDH23-212ENST00000616684 EFR3BQ9Y2G0 817 aa18.89■□□□□ 0.61
CDH23-212ENST00000616684 EDF1O60869 148 aaKnown RBP18.88■□□□□ 0.61
CDH23-212ENST00000616684 NOMO1Q15155 1222 aa18.88■□□□□ 0.61
CDH23-212ENST00000616684 LRRC49Q8IUZ0 686 aa18.88■□□□□ 0.61
CDH23-212ENST00000616684 ZNF614Q8N883 585 aa18.88■□□□□ 0.61
CDH23-212ENST00000616684 C2orf49Q9BVC5 232 aaPredicted RBP18.88■□□□□ 0.61
CDH23-212ENST00000616684 RICTORQ6R327 1708 aa18.88■□□□□ 0.61
CDH23-212ENST00000616684 HDAC3O15379 428 aa18.88■□□□□ 0.61
CDH23-212ENST00000616684 TNFAIP8O95379 198 aa18.88■□□□□ 0.61
CDH23-212ENST00000616684 RPL9P32969 192 aaKnown RBP18.88■□□□□ 0.61
CDH23-212ENST00000616684 NEK3P51956 506 aa18.88■□□□□ 0.61
CDH23-212ENST00000616684 MRPL28Q13084 256 aaKnown RBP18.88■□□□□ 0.61
CDH23-212ENST00000616684 XRCC4Q13426 336 aa18.88■□□□□ 0.61
CDH23-212ENST00000616684 CCDC142Q17RM4 750 aa18.88■□□□□ 0.61
CDH23-212ENST00000616684 LCLAT1Q6UWP7 414 aa18.88■□□□□ 0.61
CDH23-212ENST00000616684 PLEKHM3Q6ZWE6 761 aa18.88■□□□□ 0.61
CDH23-212ENST00000616684 FAM35AQ86V20 835 aa18.88■□□□□ 0.61
CDH23-212ENST00000616684 TNS4Q8IZW8 715 aa18.88■□□□□ 0.61
CDH23-212ENST00000616684 SERAC1Q96JX3 654 aa18.88■□□□□ 0.61
CDH23-212ENST00000616684 ARL15Q9NXU5 204 aa18.88■□□□□ 0.61
CDH23-212ENST00000616684 COL20A1Q9P218 1284 aa18.88■□□□□ 0.61
CDH23-212ENST00000616684 TRPC4Q9UBN4 977 aa18.88■□□□□ 0.61
CDH23-212ENST00000616684 SNTNA6NMZ2 147 aa18.88■□□□□ 0.61
CDH23-212ENST00000616684 ZMPSTE24O75844 475 aa18.88■□□□□ 0.61
CDH23-212ENST00000616684 ABCB1P08183 1280 aaPredicted RBP18.88■□□□□ 0.61
CDH23-212ENST00000616684 GSTM1P09488 218 aa18.88■□□□□ 0.61
CDH23-212ENST00000616684 LBX2Q6XYB7 198 aa18.88■□□□□ 0.61
CDH23-212ENST00000616684 NDNQ99608 321 aa18.88■□□□□ 0.61
CDH23-212ENST00000616684 PCDH8O95206 1070 aa18.88■□□□□ 0.61
CDH23-212ENST00000616684 ALDH9A1P49189 494 aa18.88■□□□□ 0.61
CDH23-212ENST00000616684 JAM2P57087 298 aa18.88■□□□□ 0.61
CDH23-212ENST00000616684 LPCAT2Q7L5N7 544 aa18.88■□□□□ 0.61
CDH23-212ENST00000616684 CYP4Z1Q86W10 505 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms