RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 FGD4Q96M96 766 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 MPP6Q9NZW5 540 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 CCDC167Q9P0B6 97 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 CDYLQ9Y232 598 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 SVILO95425 2214 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 TJP1Q07157 1748 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 MARF1Q9Y4F3 1742 aaKnown RBP5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 CASZ1Q86V15 1759 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 COL1A2P08123 1366 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 MEI4A8MW99 385 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 SNAI1O95863 264 aaPredicted RBP5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 FGFR1P11362 822 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 CHRM3P20309 590 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 MAXP61244 160 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 MRPS22P82650 360 aaKnown RBP5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 GRM3Q14832 879 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 CLEC20AQ6ZU45 233 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 PIAS4Q8N2W9 510 aaPredicted RBP5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 BHMTQ93088 406 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 NTAN1Q96AB6 310 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 KLHL5Q96PQ7 755 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 KCTD15Q96SI1 283 aaPredicted RBP5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 CENPKQ9BS16 269 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 NMRK1Q9NWW6 199 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 SLC17A6Q9P2U8 582 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 PADI3Q9ULW8 664 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 RAP2CQ9Y3L5 183 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 DNAJC25-GNG10A0A024R161 153 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 NEMP2A6NFY4 417 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 TRAFD1O14545 582 aaPredicted RBP5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 RPLP2P05387 115 aaKnown RBP5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 HNRNPLP14866 589 aaKnown RBP eCLIP5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 PSEN1P49768 467 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 RAB15P59190 212 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 CYLC2Q14093 348 aaPredicted RBP5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 WLSQ5T9L3 541 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 ANKS6Q68DC2 871 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 LRRC8EQ6NSJ5 796 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 MARK2Q7KZI7 788 aaKnown RBP5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 ARHGAP18Q8N392 663 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 PCDH20Q8N6Y1 951 aaKnown RBP5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 EFCAB3Q8N7B9 438 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 USP13Q92995 863 aaPredicted RBP5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 SEMA3CQ99985 751 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 EBF2Q9HAK2 575 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 IGSF9Q9P2J2 1179 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 TRPV2Q9Y5S1 764 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 SNX13Q9Y5W8 968 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 LAMB4A4D0S4 1761 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 SCN9AQ15858 1988 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 CITO14578 2027 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 E5RI56 91 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 SOCS7O14512 581 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 SPTLC1O15269 473 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 MAGEC1O60732 1142 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 SNX2O60749 519 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 NOL3O60936 208 aaKnown RBP5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 ATP5BP06576 529 aaKnown RBP5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 CHRNA4P43681 627 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 RAB27AP51159 221 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 TBX4P57082 545 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 SOX4Q06945 474 aaPredicted RBP5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 PDAP1Q13442 181 aaKnown RBP5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 UBAP2LQ14157 1087 aaKnown RBP5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 PRKD1Q15139 912 aaPredicted RBP5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 ZNF280DQ6N043 979 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 TIGD7Q6NT04 549 aaPredicted RBP5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 TMEM130Q8N3G9 435 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 MPP5Q8N3R9 675 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 TDRD5Q8NAT2 981 aaKnown RBP5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 AZIN2Q96A70 460 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 SDCCAG3Q96C92 435 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 MTG1Q9BT17 334 aaPredicted RBP5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 IL1RL2Q9HB29 575 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 ACSS2Q9NR19 701 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 MORF4L1Q9UBU8 362 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 DSEQ9UL01 958 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 FAM159BA6NKW6 160 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 MEIS3P2A8K0S8 358 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 ALDOAP04075 364 aaKnown RBP5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 CCDC166P0CW27 439 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 HOXB8P17481 243 aaPredicted RBP5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 PTPN3P26045 913 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 MLLT6P55198 1093 aaPredicted RBP5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 HNRNPDQ14103 355 aaKnown RBP5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 GALNTL6Q49A17 601 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 ZNF618Q5T7W0 954 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 C16orf89Q6UX73 402 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 TAS2R42Q7RTR8 314 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 TAC4Q86UU9 113 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 MON1AQ86VX9 555 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 LRRC49Q8IUZ0 686 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 OLFM3Q96PB7 478 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 EGFL8Q99944 293 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 COG4Q9H9E3 785 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 EURLQ9NYK6 297 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 ZNF212Q9UDV6 495 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 SFMBT1Q9UHJ3 866 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 ADAM28Q9UKQ2 775 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms