RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 PABPC3Q9H361 631 aaKnown RBP12.81□□□□□ -0.36
TCF4-248ENST00000616053 RBM22Q9NW64 420 aaKnown RBP eCLIP12.81□□□□□ -0.36
TCF4-248ENST00000616053 LRRC72A6NJI9 287 aa12.81□□□□□ -0.36
TCF4-248ENST00000616053 FOXP2O15409 715 aa12.81□□□□□ -0.36
TCF4-248ENST00000616053 RNASEH2AO75792 299 aaKnown RBP12.81□□□□□ -0.36
TCF4-248ENST00000616053 IFNGP01579 166 aa12.81□□□□□ -0.36
TCF4-248ENST00000616053 CHRNGP07510 517 aa12.81□□□□□ -0.36
TCF4-248ENST00000616053 IFNAR1P17181 557 aa12.81□□□□□ -0.36
TCF4-248ENST00000616053 ZCCHC12Q6PEW1 402 aa12.81□□□□□ -0.36
TCF4-248ENST00000616053 UBR7Q8N806 425 aa12.81□□□□□ -0.36
TCF4-248ENST00000616053 TSEN15Q8WW01 171 aaKnown RBP12.81□□□□□ -0.36
TCF4-248ENST00000616053 ATL1Q8WXF7 558 aa12.81□□□□□ -0.36
TCF4-248ENST00000616053 EFCAB1Q9HAE3 211 aa12.81□□□□□ -0.36
TCF4-248ENST00000616053 GAKO14976 1311 aa12.81□□□□□ -0.36
TCF4-248ENST00000616053 A0A1W2PQ27 194 aa12.81□□□□□ -0.36
TCF4-248ENST00000616053 A0A1W2PQ64 194 aa12.81□□□□□ -0.36
TCF4-248ENST00000616053 A0A1W2PQD8 194 aa12.81□□□□□ -0.36
TCF4-248ENST00000616053 ANXA6P08133 673 aa12.81□□□□□ -0.36
TCF4-248ENST00000616053 NAT16Q8N8M0 369 aa12.81□□□□□ -0.36
TCF4-248ENST00000616053 APOL2Q9BQE5 337 aa12.81□□□□□ -0.36
TCF4-248ENST00000616053 MTMR4Q9NYA4 1195 aa12.81□□□□□ -0.36
TCF4-248ENST00000616053 IKZF2Q9UKS7 526 aa12.81□□□□□ -0.36
TCF4-248ENST00000616053 PITPNM2Q9BZ72 1349 aa12.81□□□□□ -0.36
TCF4-248ENST00000616053 TCP11X1B4DZS4 312 aa12.81□□□□□ -0.36
TCF4-248ENST00000616053 QSOX1O00391 747 aa12.81□□□□□ -0.36
TCF4-248ENST00000616053 CHMP24386 653 aa12.81□□□□□ -0.36
TCF4-248ENST00000616053 MYL9P24844 172 aa12.81□□□□□ -0.36
TCF4-248ENST00000616053 FAM98BQ52LJ0 330 aaKnown RBP12.81□□□□□ -0.36
TCF4-248ENST00000616053 CHST4Q8NCG5 386 aa12.81□□□□□ -0.36
TCF4-248ENST00000616053 OR2L8Q8NGY9 312 aa12.81□□□□□ -0.36
TCF4-248ENST00000616053 RRP15Q9Y3B9 282 aaKnown RBP12.81□□□□□ -0.36
TCF4-248ENST00000616053 AP4S1Q9Y587 144 aa12.81□□□□□ -0.36
TCF4-248ENST00000616053 TRBV23OR9-2A0A075B6M9 112 aa12.8□□□□□ -0.36
TCF4-248ENST00000616053 SLC7A1P30825 629 aa12.8□□□□□ -0.36
TCF4-248ENST00000616053 NFRKBQ6P4R8 1299 aa12.8□□□□□ -0.36
TCF4-248ENST00000616053 TMC8Q8IU68 726 aa12.8□□□□□ -0.36
TCF4-248ENST00000616053 BEND7Q8N7W2 519 aaPredicted RBP12.8□□□□□ -0.36
TCF4-248ENST00000616053 CLHC1Q8NHS4 586 aa12.8□□□□□ -0.36
TCF4-248ENST00000616053 PRMT6Q96LA8 375 aaPredicted RBP12.8□□□□□ -0.36
TCF4-248ENST00000616053 GRIP2Q9C0E4 1043 aa12.8□□□□□ -0.36
TCF4-248ENST00000616053 SIRPGQ9P1W8 387 aa12.8□□□□□ -0.36
TCF4-248ENST00000616053 FAM172BPA6NC97 362 aa12.8□□□□□ -0.36
TCF4-248ENST00000616053 VGLL3A8MV65 326 aa12.8□□□□□ -0.36
TCF4-248ENST00000616053 PSTPIP1O43586 416 aa12.8□□□□□ -0.36
TCF4-248ENST00000616053 ATF4P18848 351 aaPredicted RBP12.8□□□□□ -0.36
TCF4-248ENST00000616053 LTKP29376 864 aa12.8□□□□□ -0.36
TCF4-248ENST00000616053 TKTL1P51854 596 aa12.8□□□□□ -0.36
TCF4-248ENST00000616053 DENND5AQ6IQ26 1287 aa12.8□□□□□ -0.36
TCF4-248ENST00000616053 GPR141Q7Z602 305 aa12.8□□□□□ -0.36
TCF4-248ENST00000616053 C4orf33Q8N1A6 199 aa12.8□□□□□ -0.36
TCF4-248ENST00000616053 ZNF285Q96NJ3 590 aa12.8□□□□□ -0.36
TCF4-248ENST00000616053 ATP6V1B1P15313 513 aa12.8□□□□□ -0.36
TCF4-248ENST00000616053 MBTD1Q05BQ5 628 aa12.8□□□□□ -0.36
TCF4-248ENST00000616053 ORC1Q13415 861 aa12.8□□□□□ -0.36
TCF4-248ENST00000616053 SLC22A9Q8IVM8 553 aa12.8□□□□□ -0.36
TCF4-248ENST00000616053 APOL4Q9BPW4 351 aa12.8□□□□□ -0.36
TCF4-248ENST00000616053 GPR108Q9NPR9 543 aa12.8□□□□□ -0.36
TCF4-248ENST00000616053 AP4E1Q9UPM8 1137 aa12.8□□□□□ -0.36
TCF4-248ENST00000616053 ZNF536O15090 1300 aa12.8□□□□□ -0.36
TCF4-248ENST00000616053 GLUD1P00367 558 aa12.8□□□□□ -0.36
TCF4-248ENST00000616053 IL1AP01583 271 aa12.8□□□□□ -0.36
TCF4-248ENST00000616053 RB1P06400 928 aa12.8□□□□□ -0.36
TCF4-248ENST00000616053 BUD31P41223 144 aaPredicted RBP12.8□□□□□ -0.36
TCF4-248ENST00000616053 DRG2P55039 364 aaKnown RBP12.8□□□□□ -0.36
TCF4-248ENST00000616053 ST3GAL4Q11206 333 aa12.8□□□□□ -0.36
TCF4-248ENST00000616053 EIF3MQ7L2H7 374 aaKnown RBP12.8□□□□□ -0.36
TCF4-248ENST00000616053 EDEM1Q92611 657 aa12.8□□□□□ -0.36
TCF4-248ENST00000616053 ERVK-18Q9QC07 812 aa12.8□□□□□ -0.36
TCF4-248ENST00000616053 OPTCQ9UBM4 332 aa12.8□□□□□ -0.36
TCF4-248ENST00000616053 RCOR1Q9UKL0 485 aa12.8□□□□□ -0.36
TCF4-248ENST00000616053 WASF3Q9UPY6 502 aa12.8□□□□□ -0.36
TCF4-248ENST00000616053 NCAPD2Q15021 1401 aa12.8□□□□□ -0.36
TCF4-248ENST00000616053 TRIM64CA6NLI5 447 aa12.8□□□□□ -0.36
TCF4-248ENST00000616053 JCHAINP01591 159 aa12.8□□□□□ -0.36
TCF4-248ENST00000616053 CHKAP35790 457 aa12.8□□□□□ -0.36
TCF4-248ENST00000616053 PIK3CGP48736 1102 aa12.8□□□□□ -0.36
TCF4-248ENST00000616053 CLCN3P51790 818 aa12.8□□□□□ -0.36
TCF4-248ENST00000616053 NR1D2Q14995 579 aa12.8□□□□□ -0.36
TCF4-248ENST00000616053 SAMD4BQ5PRF9 694 aaKnown RBP12.8□□□□□ -0.36
TCF4-248ENST00000616053 SDR16C5Q8N3Y7 309 aa12.8□□□□□ -0.36
TCF4-248ENST00000616053 RIBC1Q8N443 379 aaPredicted RBP12.8□□□□□ -0.36
TCF4-248ENST00000616053 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.8□□□□□ -0.36
TCF4-248ENST00000616053 MDFIC2A0A1B0GVS7 189 aa12.8□□□□□ -0.36
TCF4-248ENST00000616053 UBE2R2Q712K3 238 aaPredicted RBP12.8□□□□□ -0.36
TCF4-248ENST00000616053 ZNF518BQ9C0D4 1074 aa12.8□□□□□ -0.36
TCF4-248ENST00000616053 NUP50Q9UKX7 468 aa12.8□□□□□ -0.36
TCF4-248ENST00000616053 BST2Q10589 180 aaKnown RBP12.8□□□□□ -0.36
TCF4-248ENST00000616053 C3orf20Q8ND61 904 aa12.8□□□□□ -0.36
TCF4-248ENST00000616053 SLC22A8Q8TCC7 542 aa12.8□□□□□ -0.36
TCF4-248ENST00000616053 BORCS8Q96FH0 119 aa12.8□□□□□ -0.36
TCF4-248ENST00000616053 STRADBQ9C0K7 418 aa12.8□□□□□ -0.36
TCF4-248ENST00000616053 ANTXR1Q9H6X2 564 aa12.8□□□□□ -0.36
TCF4-248ENST00000616053 MED24O75448 989 aa12.79□□□□□ -0.36
TCF4-248ENST00000616053 WASP42768 502 aa12.79□□□□□ -0.36
TCF4-248ENST00000616053 TUBP50607 506 aa12.79□□□□□ -0.36
TCF4-248ENST00000616053 HSPA14Q0VDF9 509 aa12.79□□□□□ -0.36
TCF4-248ENST00000616053 BOLA3Q53S33 107 aa12.79□□□□□ -0.36
TCF4-248ENST00000616053 OR2AJ1Q8NGZ0 328 aa12.79□□□□□ -0.36
TCF4-248ENST00000616053 LRRC20Q8TCA0 184 aa12.79□□□□□ -0.36
TCF4-248ENST00000616053 HERVK_113Q902F9 699 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms