RNA–Protein interactions for RNA: ENST00000616000.4

STRA6-222, Transcript of stimulated by retinoic acid 6, human

APPRIS P1 TSL 2 BASIC

Gene STRA6, Length 2,843 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRA6-222	ENST00000616000	IRF9	Q00978	393 aa		13.47	□□□□□ -0.25
STRA6-222	ENST00000616000	TMEM132D	Q14C87	1099 aa		13.47	□□□□□ -0.25
STRA6-222	ENST00000616000	HERC3	Q15034	1050 aa		13.47	□□□□□ -0.25
STRA6-222	ENST00000616000	IRAK1BP1	Q5VVH5	260 aa		13.47	□□□□□ -0.25
STRA6-222	ENST00000616000	STEAP4	Q687X5	459 aa		13.47	□□□□□ -0.25
STRA6-222	ENST00000616000	RNF148	Q8N7C7	305 aa		13.47	□□□□□ -0.25
STRA6-222	ENST00000616000	RP9	Q8TA86	221 aa	Known RBP	13.47	□□□□□ -0.25
STRA6-222	ENST00000616000	NDRG1	Q92597	394 aa	Known RBP	13.47	□□□□□ -0.25
STRA6-222	ENST00000616000	CDKL2	Q92772	493 aa		13.47	□□□□□ -0.25
STRA6-222	ENST00000616000	TOP1MT	Q969P6	601 aa		13.47	□□□□□ -0.25
STRA6-222	ENST00000616000	FAM167A	Q96KS9	214 aa		13.47	□□□□□ -0.25
STRA6-222	ENST00000616000	LENG8	Q96PV6	779 aa	Predicted RBP	13.47	□□□□□ -0.25
STRA6-222	ENST00000616000	TBCB	Q99426	244 aa		13.47	□□□□□ -0.25
STRA6-222	ENST00000616000	FDXACB1	Q9BRP7	624 aa	Predicted RBP	13.47	□□□□□ -0.25
STRA6-222	ENST00000616000	WDR55	Q9H6Y2	383 aa	Predicted RBP	13.47	□□□□□ -0.25
STRA6-222	ENST00000616000	DPP3	Q9NY33	737 aa		13.47	□□□□□ -0.25
STRA6-222	ENST00000616000	B3GNT3	Q9Y2A9	372 aa		13.47	□□□□□ -0.25
STRA6-222	ENST00000616000	SYNJ2BP-COX16	A0A087WUM0	186 aa		13.47	□□□□□ -0.25
STRA6-222	ENST00000616000		A0A087WXM4	84 aa		13.47	□□□□□ -0.25
STRA6-222	ENST00000616000	ARHGEF37	A1IGU5	675 aa		13.47	□□□□□ -0.25
STRA6-222	ENST00000616000	DGKI	O75912	1065 aa		13.47	□□□□□ -0.25
STRA6-222	ENST00000616000	PDGFRB	P09619	1106 aa		13.47	□□□□□ -0.25
STRA6-222	ENST00000616000	P4HA1	P13674	534 aa		13.47	□□□□□ -0.25
STRA6-222	ENST00000616000	LCP1	P13796	627 aa		13.47	□□□□□ -0.25
STRA6-222	ENST00000616000	PSMB4	P28070	264 aa		13.47	□□□□□ -0.25
STRA6-222	ENST00000616000	GMPS	P49915	693 aa	Predicted RBP	13.47	□□□□□ -0.25
STRA6-222	ENST00000616000	NAB1	Q13506	487 aa		13.47	□□□□□ -0.25
STRA6-222	ENST00000616000	GK3P	Q14409	553 aa		13.47	□□□□□ -0.25
STRA6-222	ENST00000616000	SOWAHA	Q2M3V2	549 aa		13.47	□□□□□ -0.25
STRA6-222	ENST00000616000	DCAF15	Q66K64	600 aa		13.47	□□□□□ -0.25
STRA6-222	ENST00000616000	DCLRE1A	Q6PJP8	1040 aa		13.47	□□□□□ -0.25
STRA6-222	ENST00000616000	EPGN	Q6UW88	154 aa		13.47	□□□□□ -0.25
STRA6-222	ENST00000616000	FAM131B	Q86XD5	332 aa		13.47	□□□□□ -0.25
STRA6-222	ENST00000616000	PGAM4	Q8N0Y7	254 aa		13.47	□□□□□ -0.25
STRA6-222	ENST00000616000	PDCD6IP	Q8WUM4	868 aa	Known RBP	13.47	□□□□□ -0.25
STRA6-222	ENST00000616000	FCRL3	Q96P31	734 aa	Predicted RBP	13.47	□□□□□ -0.25
STRA6-222	ENST00000616000	DOK1	Q99704	481 aa		13.47	□□□□□ -0.25
STRA6-222	ENST00000616000	COPS7B	Q9H9Q2	264 aa	Predicted RBP	13.47	□□□□□ -0.25
STRA6-222	ENST00000616000	SNX15	Q9NRS6	342 aa		13.47	□□□□□ -0.25
STRA6-222	ENST00000616000	COX16	Q9P0S2	106 aa		13.47	□□□□□ -0.25
STRA6-222	ENST00000616000	KIAA1522	Q9P206	1035 aa	Predicted RBP	13.47	□□□□□ -0.25
STRA6-222	ENST00000616000	SUN2	Q9UH99	717 aa		13.47	□□□□□ -0.25
STRA6-222	ENST00000616000	AP4S1	Q9Y587	144 aa		13.47	□□□□□ -0.25
STRA6-222	ENST00000616000	SNX9	Q9Y5X1	595 aa		13.47	□□□□□ -0.25
STRA6-222	ENST00000616000	C19orf81	C9J6K1	198 aa		13.46	□□□□□ -0.25
STRA6-222	ENST00000616000	AMH	P03971	560 aa		13.46	□□□□□ -0.25
STRA6-222	ENST00000616000	ZNF280A	P59817	542 aa	Predicted RBP	13.46	□□□□□ -0.25
STRA6-222	ENST00000616000	MRPS22	P82650	360 aa	Known RBP	13.46	□□□□□ -0.25
STRA6-222	ENST00000616000	INCA1	Q0VD86	236 aa		13.46	□□□□□ -0.25
STRA6-222	ENST00000616000	DPYSL2	Q16555	572 aa		13.46	□□□□□ -0.25
STRA6-222	ENST00000616000	DLK2	Q6UY11	383 aa		13.46	□□□□□ -0.25
STRA6-222	ENST00000616000	LILRA2	Q8N149	483 aa		13.46	□□□□□ -0.25
STRA6-222	ENST00000616000	DCLK2	Q8N568	766 aa		13.46	□□□□□ -0.25
STRA6-222	ENST00000616000	CHST13	Q8NET6	341 aa		13.46	□□□□□ -0.25
STRA6-222	ENST00000616000	ISOC1	Q96CN7	298 aa		13.46	□□□□□ -0.25
STRA6-222	ENST00000616000	SPATA33	Q96N06	139 aa		13.46	□□□□□ -0.25
STRA6-222	ENST00000616000	AGAP2	Q99490	1192 aa		13.46	□□□□□ -0.25
STRA6-222	ENST00000616000	CGREF1	Q99674	301 aa		13.46	□□□□□ -0.25
STRA6-222	ENST00000616000	PKP2	Q99959	881 aa		13.46	□□□□□ -0.25
STRA6-222	ENST00000616000	UNK	Q9C0B0	810 aa	Known RBP	13.46	□□□□□ -0.25
STRA6-222	ENST00000616000	DPEP3	Q9H4B8	488 aa		13.46	□□□□□ -0.25
STRA6-222	ENST00000616000	TXNDC16	Q9P2K2	825 aa		13.46	□□□□□ -0.25
STRA6-222	ENST00000616000	ZNF112	Q9UJU3	913 aa		13.46	□□□□□ -0.25
STRA6-222	ENST00000616000	TMEM98	Q9Y2Y6	226 aa		13.46	□□□□□ -0.25
STRA6-222	ENST00000616000	HES2	Q9Y543	173 aa		13.46	□□□□□ -0.25
STRA6-222	ENST00000616000		A0A0A0MRY4	1105 aa		13.46	□□□□□ -0.25
STRA6-222	ENST00000616000	TRIM64B	A6NI03	449 aa		13.46	□□□□□ -0.25
STRA6-222	ENST00000616000	MFSD11	O43934	449 aa		13.46	□□□□□ -0.25
STRA6-222	ENST00000616000	HSPA4L	O95757	839 aa		13.46	□□□□□ -0.25
STRA6-222	ENST00000616000	ME2	P23368	584 aa		13.46	□□□□□ -0.25
STRA6-222	ENST00000616000	ATIC	P31939	592 aa		13.46	□□□□□ -0.25
STRA6-222	ENST00000616000	C21orf59	P57076	290 aa		13.46	□□□□□ -0.25
STRA6-222	ENST00000616000	CCDC153	Q494R4	210 aa		13.46	□□□□□ -0.25
STRA6-222	ENST00000616000	ACVR1C	Q8NER5	493 aa		13.46	□□□□□ -0.25
STRA6-222	ENST00000616000	SLC35F5	Q8WV83	523 aa		13.46	□□□□□ -0.25
STRA6-222	ENST00000616000	CCDC97	Q96F63	343 aa	Predicted RBP	13.46	□□□□□ -0.25
STRA6-222	ENST00000616000	PLEKHA8	Q96JA3	519 aa		13.46	□□□□□ -0.25
STRA6-222	ENST00000616000	SNX27	Q96L92	541 aa		13.46	□□□□□ -0.25
STRA6-222	ENST00000616000	SPATA13	Q96N96	652 aa		13.46	□□□□□ -0.25
STRA6-222	ENST00000616000	FERMT1	Q9BQL6	677 aa		13.46	□□□□□ -0.25
STRA6-222	ENST00000616000	TDRD1	Q9BXT4	1180 aa	Known RBP	13.46	□□□□□ -0.25
STRA6-222	ENST00000616000	SLC4A5	Q9BY07	1137 aa		13.46	□□□□□ -0.25
STRA6-222	ENST00000616000	ANKRD60	Q9BZ19	345 aa		13.46	□□□□□ -0.25
STRA6-222	ENST00000616000	SLC38A7	Q9NVC3	462 aa		13.46	□□□□□ -0.25
STRA6-222	ENST00000616000	GGA3	Q9NZ52	723 aa		13.46	□□□□□ -0.25
STRA6-222	ENST00000616000	SELENON	Q9NZV5	590 aa		13.46	□□□□□ -0.25
STRA6-222	ENST00000616000	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	13.45	□□□□□ -0.26
STRA6-222	ENST00000616000	RNF103	O00237	685 aa		13.45	□□□□□ -0.26
STRA6-222	ENST00000616000	LTF	P02788	710 aa		13.45	□□□□□ -0.26
STRA6-222	ENST00000616000	VTN	P04004	478 aa		13.45	□□□□□ -0.26
STRA6-222	ENST00000616000	ARF4	P18085	180 aa	Predicted RBP	13.45	□□□□□ -0.26
STRA6-222	ENST00000616000	PGAM1	P18669	254 aa		13.45	□□□□□ -0.26
STRA6-222	ENST00000616000	GLDC	P23378	1020 aa		13.45	□□□□□ -0.26
STRA6-222	ENST00000616000	EDNRB	P24530	442 aa		13.45	□□□□□ -0.26
STRA6-222	ENST00000616000	ADORA2B	P29275	332 aa		13.45	□□□□□ -0.26
STRA6-222	ENST00000616000	TMED10	P49755	219 aa	Known RBP	13.45	□□□□□ -0.26
STRA6-222	ENST00000616000	NUDT2	P50583	147 aa		13.45	□□□□□ -0.26
STRA6-222	ENST00000616000	PKDCC	Q504Y2	493 aa		13.45	□□□□□ -0.26
STRA6-222	ENST00000616000	ZNF354C	Q86Y25	554 aa		13.45	□□□□□ -0.26
STRA6-222	ENST00000616000	CCNY	Q8ND76	341 aa		13.45	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 24 ms