RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 GRM5P41594 1212 aa22.34■■□□□ 1.17
POLR2J3-220ENST00000613744 MAGEA6P43360 314 aa22.34■■□□□ 1.17
POLR2J3-220ENST00000613744 LPCAT2Q7L5N7 544 aa22.34■■□□□ 1.17
POLR2J3-220ENST00000613744 TMEM35BQ8NCS4 154 aa22.34■■□□□ 1.17
POLR2J3-220ENST00000613744 FNIP1Q8TF40 1166 aa22.34■■□□□ 1.17
POLR2J3-220ENST00000613744 ELMO3Q96BJ8 720 aa22.34■■□□□ 1.17
POLR2J3-220ENST00000613744 CCT7Q99832 543 aa22.34■■□□□ 1.17
POLR2J3-220ENST00000613744 PAK5Q9P286 719 aa22.34■■□□□ 1.17
POLR2J3-220ENST00000613744 TMED5Q9Y3A6 229 aa22.34■■□□□ 1.17
POLR2J3-220ENST00000613744 ZNF711Q9Y462 761 aa22.34■■□□□ 1.17
POLR2J3-220ENST00000613744 LTBP2Q14767 1821 aa22.33■■□□□ 1.17
POLR2J3-220ENST00000613744 CXorf49A8MYA2 514 aaPredicted RBP22.33■■□□□ 1.17
POLR2J3-220ENST00000613744 THRAP10827 490 aa22.33■■□□□ 1.17
POLR2J3-220ENST00000613744 AFF1P51825 1210 aaKnown RBP22.33■■□□□ 1.17
POLR2J3-220ENST00000613744 ZNF132P52740 706 aa22.33■■□□□ 1.17
POLR2J3-220ENST00000613744 PPIGQ13427 754 aaKnown RBP eCLIP22.33■■□□□ 1.17
POLR2J3-220ENST00000613744 SLC10A6Q3KNW5 377 aa22.33■■□□□ 1.17
POLR2J3-220ENST00000613744 GRAMD4Q6IC98 578 aa22.33■■□□□ 1.17
POLR2J3-220ENST00000613744 TMEM130Q8N3G9 435 aa22.33■■□□□ 1.17
POLR2J3-220ENST00000613744 TRIML2Q8N7C3 387 aa22.33■■□□□ 1.17
POLR2J3-220ENST00000613744 ZNF606Q8WXB4 792 aa22.33■■□□□ 1.17
POLR2J3-220ENST00000613744 COX4I2Q96KJ9 171 aa22.33■■□□□ 1.17
POLR2J3-220ENST00000613744 SAE1Q9UBE0 346 aaPredicted RBP22.33■■□□□ 1.17
POLR2J3-220ENST00000613744 PRSS51A0A1B0GVH4 220 aa22.32■■□□□ 1.16
POLR2J3-220ENST00000613744 GSRP00390 522 aa22.32■■□□□ 1.16
POLR2J3-220ENST00000613744 ZNF12P17014 697 aa22.32■■□□□ 1.16
POLR2J3-220ENST00000613744 ROR1Q01973 937 aa22.32■■□□□ 1.16
POLR2J3-220ENST00000613744 DPYSQ14117 519 aa22.32■■□□□ 1.16
POLR2J3-220ENST00000613744 ZCCHC23Q6ZST2 131 aa22.32■■□□□ 1.16
POLR2J3-220ENST00000613744 CYS1Q717R9 158 aa22.32■■□□□ 1.16
POLR2J3-220ENST00000613744 MAVSQ7Z434 540 aa22.32■■□□□ 1.16
POLR2J3-220ENST00000613744 CHERPQ8IWX8 916 aaKnown RBP22.32■■□□□ 1.16
POLR2J3-220ENST00000613744 ADGRF2Q8IZF7 708 aa22.32■■□□□ 1.16
POLR2J3-220ENST00000613744 UBR7Q8N806 425 aa22.32■■□□□ 1.16
POLR2J3-220ENST00000613744 OR5B17Q8NGF7 314 aa22.32■■□□□ 1.16
POLR2J3-220ENST00000613744 HM13Q8TCT9 377 aa22.32■■□□□ 1.16
POLR2J3-220ENST00000613744 ACSF2Q96CM8 615 aaPredicted RBP22.32■■□□□ 1.16
POLR2J3-220ENST00000613744 FAF2Q96CS3 445 aa22.32■■□□□ 1.16
POLR2J3-220ENST00000613744 CGRRF1Q99675 332 aa22.32■■□□□ 1.16
POLR2J3-220ENST00000613744 ZNF195O14628 629 aa22.32■■□□□ 1.16
POLR2J3-220ENST00000613744 SLC22A2O15244 555 aa22.32■■□□□ 1.16
POLR2J3-220ENST00000613744 ALDH2P05091 517 aa22.32■■□□□ 1.16
POLR2J3-220ENST00000613744 CDH5P33151 784 aaPredicted RBP22.32■■□□□ 1.16
POLR2J3-220ENST00000613744 PPARGP37231 505 aaPredicted RBP22.32■■□□□ 1.16
POLR2J3-220ENST00000613744 HARS2P49590 506 aaKnown RBP22.32■■□□□ 1.16
POLR2J3-220ENST00000613744 TFAMQ00059 246 aaKnown RBP22.32■■□□□ 1.16
POLR2J3-220ENST00000613744 GLRA4Q5JXX5 417 aa22.32■■□□□ 1.16
POLR2J3-220ENST00000613744 FAXCQ5TGI0 409 aa22.32■■□□□ 1.16
POLR2J3-220ENST00000613744 AGMOQ6ZNB7 445 aa22.32■■□□□ 1.16
POLR2J3-220ENST00000613744 AMIGO2Q86SJ2 522 aa22.32■■□□□ 1.16
POLR2J3-220ENST00000613744 KBTBD7Q8WVZ9 684 aa22.32■■□□□ 1.16
POLR2J3-220ENST00000613744 SGF29Q96ES7 293 aa22.32■■□□□ 1.16
POLR2J3-220ENST00000613744 ZFP42Q96MM3 310 aa22.32■■□□□ 1.16
POLR2J3-220ENST00000613744 C10orf88Q9H8K7 445 aa22.32■■□□□ 1.16
POLR2J3-220ENST00000613744 TBC1D23Q9NUY8 699 aa22.32■■□□□ 1.16
POLR2J3-220ENST00000613744 PCDHGB4Q9UN71 923 aa22.32■■□□□ 1.16
POLR2J3-220ENST00000613744 PCDHGB5Q9Y5G0 923 aa22.32■■□□□ 1.16
POLR2J3-220ENST00000613744 ZBBXA8MT70 800 aa22.31■■□□□ 1.16
POLR2J3-220ENST00000613744 LACTBL1A8MY62 500 aa22.31■■□□□ 1.16
POLR2J3-220ENST00000613744 NUMBP49757 651 aa22.31■■□□□ 1.16
POLR2J3-220ENST00000613744 KLF10Q13118 480 aa22.31■■□□□ 1.16
POLR2J3-220ENST00000613744 TDRD10Q5VZ19 366 aaKnown RBP22.31■■□□□ 1.16
POLR2J3-220ENST00000613744 LZTR1Q8N653 840 aa22.31■■□□□ 1.16
POLR2J3-220ENST00000613744 MTMR12Q9C0I1 747 aa22.31■■□□□ 1.16
POLR2J3-220ENST00000613744 INIPQ9NRY2 104 aa22.31■■□□□ 1.16
POLR2J3-220ENST00000613744 RANBP2P49792 3224 aaKnown RBP22.31■■□□□ 1.16
POLR2J3-220ENST00000613744 CLASP2O75122 1294 aaKnown RBP22.3■■□□□ 1.16
POLR2J3-220ENST00000613744 SERPINB7O75635 380 aa22.3■■□□□ 1.16
POLR2J3-220ENST00000613744 BMP10O95393 424 aa22.3■■□□□ 1.16
POLR2J3-220ENST00000613744 H6PDO95479 791 aa22.3■■□□□ 1.16
POLR2J3-220ENST00000613744 FGBP02675 491 aa22.3■■□□□ 1.16
POLR2J3-220ENST00000613744 DEFB103AP81534 67 aa22.3■■□□□ 1.16
POLR2J3-220ENST00000613744 FLOT2Q14254 428 aa22.3■■□□□ 1.16
POLR2J3-220ENST00000613744 NOMO1Q15155 1222 aa22.3■■□□□ 1.16
POLR2J3-220ENST00000613744 C6orf52Q5T4I8 152 aa22.3■■□□□ 1.16
POLR2J3-220ENST00000613744 FAM117BQ6P1L5 589 aa22.3■■□□□ 1.16
POLR2J3-220ENST00000613744 SETD3Q86TU7 594 aaPredicted RBP22.3■■□□□ 1.16
POLR2J3-220ENST00000613744 RFX6Q8HWS3 928 aa22.3■■□□□ 1.16
POLR2J3-220ENST00000613744 MCUQ8NE86 351 aa22.3■■□□□ 1.16
POLR2J3-220ENST00000613744 GSDMBQ8TAX9 411 aa22.3■■□□□ 1.16
POLR2J3-220ENST00000613744 PFDN4Q9NQP4 134 aa22.3■■□□□ 1.16
POLR2J3-220ENST00000613744 TUBA8Q9NY65 449 aaPredicted RBP22.3■■□□□ 1.16
POLR2J3-220ENST00000613744 CDH7Q9ULB5 785 aa22.3■■□□□ 1.16
POLR2J3-220ENST00000613744 CEP290O15078 2479 aa22.3■■□□□ 1.16
POLR2J3-220ENST00000613744 MICAL3Q7RTP6 2002 aa22.3■■□□□ 1.16
POLR2J3-220ENST00000613744 NFICP08651 508 aa22.3■■□□□ 1.16
POLR2J3-220ENST00000613744 PFKPQ01813 784 aa22.3■■□□□ 1.16
POLR2J3-220ENST00000613744 RELAQ04206 551 aa22.3■■□□□ 1.16
POLR2J3-220ENST00000613744 BMPR2Q13873 1038 aa22.3■■□□□ 1.16
POLR2J3-220ENST00000613744 KYAT1Q16773 422 aa22.3■■□□□ 1.16
POLR2J3-220ENST00000613744 INSCQ1MX18 579 aa22.3■■□□□ 1.16
POLR2J3-220ENST00000613744 C4orf22Q6V702 233 aa22.3■■□□□ 1.16
POLR2J3-220ENST00000613744 GIPC3Q8TF64 312 aa22.3■■□□□ 1.16
POLR2J3-220ENST00000613744 ATP2A3Q93084 1043 aa22.3■■□□□ 1.16
POLR2J3-220ENST00000613744 BORCS5Q969J3 196 aa22.3■■□□□ 1.16
POLR2J3-220ENST00000613744 RTP4Q96DX8 246 aa22.3■■□□□ 1.16
POLR2J3-220ENST00000613744 GAD1Q99259 594 aa22.3■■□□□ 1.16
POLR2J3-220ENST00000613744 SORT1Q99523 831 aa22.3■■□□□ 1.16
POLR2J3-220ENST00000613744 HNRNPABQ99729 332 aaKnown RBP22.3■■□□□ 1.16
POLR2J3-220ENST00000613744 OSBPL11Q9BXB4 747 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms