RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 BIRC5O15392 142 aa17.66■□□□□ 0.42
HMGXB3-206ENST00000613459 SGTAO43765 313 aa17.66■□□□□ 0.42
HMGXB3-206ENST00000613459 TNK2Q07912 1038 aa17.66■□□□□ 0.42
HMGXB3-206ENST00000613459 ACSM2AQ08AH3 577 aa17.66■□□□□ 0.42
HMGXB3-206ENST00000613459 ACSM2BQ68CK6 577 aa17.66■□□□□ 0.42
HMGXB3-206ENST00000613459 USP45Q70EL2 814 aa17.66■□□□□ 0.42
HMGXB3-206ENST00000613459 ZNF655Q8N720 491 aaPredicted RBP17.66■□□□□ 0.42
HMGXB3-206ENST00000613459 ZNF513Q8N8E2 541 aaPredicted RBP17.66■□□□□ 0.42
HMGXB3-206ENST00000613459 WNT8BQ93098 351 aa17.66■□□□□ 0.42
HMGXB3-206ENST00000613459 MED8Q96G25 268 aa17.66■□□□□ 0.42
HMGXB3-206ENST00000613459 FAM163AQ96GL9 167 aaPredicted RBP17.66■□□□□ 0.42
HMGXB3-206ENST00000613459 SPATA5L1Q9BVQ7 753 aa17.66■□□□□ 0.42
HMGXB3-206ENST00000613459 STARD7Q9NQZ5 370 aa17.66■□□□□ 0.42
HMGXB3-206ENST00000613459 UBP1Q9NZI7 540 aa17.66■□□□□ 0.42
HMGXB3-206ENST00000613459 SNX6Q9UNH7 406 aa17.66■□□□□ 0.42
HMGXB3-206ENST00000613459 ENTPD4Q9Y227 616 aa17.66■□□□□ 0.42
HMGXB3-206ENST00000613459 SMIM22K7EJ46 135 aa17.66■□□□□ 0.42
HMGXB3-206ENST00000613459 BTN3A1O00481 513 aa17.66■□□□□ 0.42
HMGXB3-206ENST00000613459 CCDC130P13994 396 aa17.66■□□□□ 0.42
HMGXB3-206ENST00000613459 TYMPP19971 482 aa17.66■□□□□ 0.42
HMGXB3-206ENST00000613459 HLA-DQA1Q5Y7H0 255 aa17.66■□□□□ 0.42
HMGXB3-206ENST00000613459 ZNF276Q8N554 614 aa17.66■□□□□ 0.42
HMGXB3-206ENST00000613459 WDR60Q8WVS4 1066 aa17.66■□□□□ 0.42
HMGXB3-206ENST00000613459 Q96MT0 163 aa17.66■□□□□ 0.42
HMGXB3-206ENST00000613459 INVSQ9Y283 1065 aa17.66■□□□□ 0.42
HMGXB3-206ENST00000613459 CATP04040 527 aaKnown RBP17.65■□□□□ 0.42
HMGXB3-206ENST00000613459 SYT12Q8IV01 421 aa17.65■□□□□ 0.42
HMGXB3-206ENST00000613459 PIWIL2Q8TC59 973 aaKnown RBP17.65■□□□□ 0.42
HMGXB3-206ENST00000613459 MCCC1Q96RQ3 725 aaPredicted RBP17.65■□□□□ 0.42
HMGXB3-206ENST00000613459 APBA2Q99767 749 aa17.65■□□□□ 0.42
HMGXB3-206ENST00000613459 IDI2Q9BXS1 227 aa17.65■□□□□ 0.42
HMGXB3-206ENST00000613459 LACTBL1A8MY62 500 aa17.65■□□□□ 0.42
HMGXB3-206ENST00000613459 NFICP08651 508 aa17.65■□□□□ 0.42
HMGXB3-206ENST00000613459 VAV1P15498 845 aa17.65■□□□□ 0.42
HMGXB3-206ENST00000613459 GSTT1P30711 240 aa17.65■□□□□ 0.42
HMGXB3-206ENST00000613459 NTSP30990 170 aa17.65■□□□□ 0.42
HMGXB3-206ENST00000613459 ALDH9A1P49189 494 aa17.65■□□□□ 0.42
HMGXB3-206ENST00000613459 HIRAP54198 1017 aaPredicted RBP17.65■□□□□ 0.42
HMGXB3-206ENST00000613459 ATP12AP54707 1039 aa17.65■□□□□ 0.42
HMGXB3-206ENST00000613459 PMF1Q6P1K2 205 aa17.65■□□□□ 0.42
HMGXB3-206ENST00000613459 VN1R5Q7Z5H4 357 aa17.65■□□□□ 0.42
HMGXB3-206ENST00000613459 ZFP28Q8NHY6 868 aa17.65■□□□□ 0.42
HMGXB3-206ENST00000613459 C18orf25Q96B23 403 aaPredicted RBP17.65■□□□□ 0.42
HMGXB3-206ENST00000613459 ABHD16BQ9H3Z7 469 aa17.65■□□□□ 0.42
HMGXB3-206ENST00000613459 ZNF624Q9P2J8 865 aaPredicted RBP17.65■□□□□ 0.42
HMGXB3-206ENST00000613459 MORF4L1Q9UBU8 362 aa17.65■□□□□ 0.42
HMGXB3-206ENST00000613459 SIK3Q9Y2K2 1263 aa17.65■□□□□ 0.42
HMGXB3-206ENST00000613459 C2CD2Q9Y426 696 aa17.65■□□□□ 0.42
HMGXB3-206ENST00000613459 GAKO14976 1311 aa17.65■□□□□ 0.42
HMGXB3-206ENST00000613459 ATP5F1P24539 256 aaPredicted RBP17.65■□□□□ 0.42
HMGXB3-206ENST00000613459 SERPINA4P29622 427 aa17.65■□□□□ 0.42
HMGXB3-206ENST00000613459 LRPAP1P30533 357 aa17.65■□□□□ 0.42
HMGXB3-206ENST00000613459 CDC42P60953 191 aa17.65■□□□□ 0.42
HMGXB3-206ENST00000613459 MFSD10Q14728 455 aa17.65■□□□□ 0.42
HMGXB3-206ENST00000613459 STON1Q9Y6Q2 735 aa17.65■□□□□ 0.42
HMGXB3-206ENST00000613459 CASTOR2A6NHX0 329 aa17.65■□□□□ 0.42
HMGXB3-206ENST00000613459 MTA2O94776 668 aa17.65■□□□□ 0.42
HMGXB3-206ENST00000613459 PARNO95453 639 aaKnown RBP17.65■□□□□ 0.42
HMGXB3-206ENST00000613459 ABCB1P08183 1280 aaPredicted RBP17.65■□□□□ 0.42
HMGXB3-206ENST00000613459 ITGA2P17301 1181 aa17.65■□□□□ 0.42
HMGXB3-206ENST00000613459 CDC25CP30307 473 aa17.65■□□□□ 0.42
HMGXB3-206ENST00000613459 NEPROQ6NW34 567 aa17.65■□□□□ 0.42
HMGXB3-206ENST00000613459 PTCD3Q96EY7 689 aaKnown RBP17.65■□□□□ 0.42
HMGXB3-206ENST00000613459 TPD52L3Q96J77 140 aa17.65■□□□□ 0.42
HMGXB3-206ENST00000613459 OSGEPL1Q9H4B0 414 aa17.65■□□□□ 0.42
HMGXB3-206ENST00000613459 PLGRKTQ9HBL7 147 aa17.65■□□□□ 0.42
HMGXB3-206ENST00000613459 LEF1Q9UJU2 399 aaPredicted RBP17.65■□□□□ 0.42
HMGXB3-206ENST00000613459 MTF2Q9Y483 593 aaPredicted RBP17.65■□□□□ 0.42
HMGXB3-206ENST00000613459 CAPN1P07384 714 aa17.64■□□□□ 0.42
HMGXB3-206ENST00000613459 PSEN1P49768 467 aa17.64■□□□□ 0.42
HMGXB3-206ENST00000613459 BROXQ5VW32 411 aa17.64■□□□□ 0.42
HMGXB3-206ENST00000613459 BHMTQ93088 406 aa17.64■□□□□ 0.42
HMGXB3-206ENST00000613459 PPP3R2Q96LZ3 170 aa17.64■□□□□ 0.42
HMGXB3-206ENST00000613459 GNPTGQ9UJJ9 305 aa17.64■□□□□ 0.42
HMGXB3-206ENST00000613459 ZNF112Q9UJU3 913 aa17.64■□□□□ 0.42
HMGXB3-206ENST00000613459 CCDC189A1A4V9 331 aa17.64■□□□□ 0.41
HMGXB3-206ENST00000613459 XYLBO75191 536 aa17.64■□□□□ 0.41
HMGXB3-206ENST00000613459 KLHL18O94889 574 aa17.64■□□□□ 0.41
HMGXB3-206ENST00000613459 PIGNO95427 931 aa17.64■□□□□ 0.41
HMGXB3-206ENST00000613459 PABPC1LQ4VXU2 614 aaKnown RBP17.64■□□□□ 0.41
HMGXB3-206ENST00000613459 SH3BP5LQ7L8J4 393 aa17.64■□□□□ 0.41
HMGXB3-206ENST00000613459 KLHL1Q9NR64 748 aa17.64■□□□□ 0.41
HMGXB3-206ENST00000613459 BLOC1S4Q9NUP1 217 aa17.64■□□□□ 0.41
HMGXB3-206ENST00000613459 SPG21Q9NZD8 308 aa17.64■□□□□ 0.41
HMGXB3-206ENST00000613459 OPLAHO14841 1288 aa17.64■□□□□ 0.41
HMGXB3-206ENST00000613459 ITGAVP06756 1048 aa17.64■□□□□ 0.41
HMGXB3-206ENST00000613459 ANXA5P08758 320 aa17.64■□□□□ 0.41
HMGXB3-206ENST00000613459 TPH1P17752 444 aa17.64■□□□□ 0.41
HMGXB3-206ENST00000613459 XIAPP98170 497 aa17.64■□□□□ 0.41
HMGXB3-206ENST00000613459 CRY1Q16526 586 aa17.64■□□□□ 0.41
HMGXB3-206ENST00000613459 TTMPQ5BVD1 217 aa17.64■□□□□ 0.41
HMGXB3-206ENST00000613459 SKA1Q96BD8 255 aa17.64■□□□□ 0.41
HMGXB3-206ENST00000613459 TEKT5Q96M29 485 aa17.64■□□□□ 0.41
HMGXB3-206ENST00000613459 CDH9Q9ULB4 789 aa17.64■□□□□ 0.41
HMGXB3-206ENST00000613459 PIK3C2BO00750 1634 aa17.64■□□□□ 0.41
HMGXB3-206ENST00000613459 CEP170BQ9Y4F5 1589 aaPredicted RBP17.64■□□□□ 0.41
HMGXB3-206ENST00000613459 DDTLA6NHG4 134 aaPredicted RBP17.64■□□□□ 0.41
HMGXB3-206ENST00000613459 ITGB6P18564 788 aa17.64■□□□□ 0.41
HMGXB3-206ENST00000613459 TNNI3P19429 210 aa17.64■□□□□ 0.41
HMGXB3-206ENST00000613459 ZNF143P52747 638 aaPredicted RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms