RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 PLA2G4FQ68DD2 849 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 HMBOX1Q6NT76 420 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 CAMKK1Q8N5S9 505 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 QPCTLQ9NXS2 382 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 TRHDEQ9UKU6 1024 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 SAMD4AQ9UPU9 718 aaKnown RBP8.88□□□□□ -0.99
TTC28-208ENST00000612946 CACNA1CQ13936 2221 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 ASIC4Q96FT7 647 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 SLC39A3Q9BRY0 314 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 PREBQ9HCU5 417 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 ARMCX1Q9P291 453 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 TSPAN1O60635 241 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 SUPT7LO94864 414 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 PTPN7P35236 360 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 PLEKHG4Q58EX7 1191 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 SATL1Q86VE3 508 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 TBC1D10CQ8IV04 446 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.88□□□□□ -0.99
TTC28-208ENST00000612946 INO80EQ8NBZ0 244 aaPredicted RBP8.88□□□□□ -0.99
TTC28-208ENST00000612946 LPCAT1Q8NF37 534 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 TBC1D16Q8TBP0 767 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 SEPHS2Q99611 448 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 THAP2Q9H0W7 228 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 CUEDC1Q9NWM3 386 aaPredicted RBP8.88□□□□□ -0.99
TTC28-208ENST00000612946 TOR4AQ9NXH8 423 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 GPRC5DQ9NZD1 345 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 PSME2Q9UL46 239 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 STOMP27105 288 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 ADGRE1Q14246 886 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 PDXDC2PQ6P474 469 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 ZNF517Q6ZMY9 492 aaPredicted RBP8.88□□□□□ -0.99
TTC28-208ENST00000612946 OR52L1Q8NGH7 329 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 TRPM5Q9NZQ8 1165 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 FEM1BQ9UK73 627 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 RAB23Q9ULC3 237 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 RAP2CQ9Y3L5 183 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 GRIP1Q9Y3R0 1128 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 FAM237AA0A1B0GTK4 181 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 TOP3BO95985 862 aaKnown RBP8.88□□□□□ -0.99
TTC28-208ENST00000612946 LBPP18428 481 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 RBP5P82980 135 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 TDRPQ86YL5 185 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 ZDHHC17Q8IUH5 632 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 KLHL1Q9NR64 748 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 MTMR10Q9NXD2 777 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 SUCOQ9UBS9 1254 aaKnown RBP8.88□□□□□ -0.99
TTC28-208ENST00000612946 PCDHA6Q9UN73 950 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 MAGED2Q9UNF1 606 aaPredicted RBP8.88□□□□□ -0.99
TTC28-208ENST00000612946 PCDHA8Q9Y5H6 950 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 KNL1Q8NG31 2342 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 F9P00740 461 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 DBTP11182 482 aaKnown RBP8.88□□□□□ -0.99
TTC28-208ENST00000612946 NFKB1P19838 968 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 RPA3P35244 121 aaPredicted RBP8.88□□□□□ -0.99
TTC28-208ENST00000612946 SLC9A5Q14940 896 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 PTPAQ15257 358 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 TRPV3Q8NET8 790 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 POLR3FQ9H1D9 316 aaPredicted RBP8.88□□□□□ -0.99
TTC28-208ENST00000612946 RPLP0P05388 317 aaKnown RBP8.88□□□□□ -0.99
TTC28-208ENST00000612946 ADRA1DP25100 572 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 NFE2L1Q14494 772 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 EIF2S3LQ2VIR3 472 aaKnown RBP8.88□□□□□ -0.99
TTC28-208ENST00000612946 FAXCQ5TGI0 409 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 ANKRD23Q86SG2 305 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 BPIFB6Q8NFQ5 453 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 USP20Q9Y2K6 914 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 BCAMP50895 628 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 TLL2Q9Y6L7 1015 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 E7ENX8 843 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 MLYCDO95822 493 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 MAPTP10636 758 aaKnown RBP8.88□□□□□ -0.99
TTC28-208ENST00000612946 KCNJ1P48048 391 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 NPY2RP49146 381 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 SLC16A1P53985 500 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 OCLNQ16625 522 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 TMPRSS11AQ6ZMR5 421 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 ELMOD2Q8IZ81 293 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 DENND6BQ8NEG7 585 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 OXER1Q8TDS5 423 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 TEFMQ96QE5 360 aaKnown RBP8.88□□□□□ -0.99
TTC28-208ENST00000612946 MTMR12Q9C0I1 747 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 XPR1Q9UBH6 696 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 TJP2Q9UDY2 1190 aa8.88□□□□□ -0.99
TTC28-208ENST00000612946 DDX3YO15523 660 aaKnown RBP8.87□□□□□ -0.99
TTC28-208ENST00000612946 RGS14O43566 566 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 FBXO21O94952 628 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 CRTAMO95727 393 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 PLEKP08567 350 aaPredicted RBP8.87□□□□□ -0.99
TTC28-208ENST00000612946 PRKAR2AP13861 404 aaKnown RBP8.87□□□□□ -0.99
TTC28-208ENST00000612946 RORCP51449 518 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 PTPRNQ16849 979 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 C11orf91Q3C1V1 193 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 C6orf183Q5T699 404 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 SLC39A8Q9C0K1 460 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 TMEM168Q9H0V1 697 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 SEMA6AQ9H2E6 1030 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 FBXO40Q9UH90 709 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 MGAT4DA6NG13 374 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 GLDCP23378 1020 aa8.87□□□□□ -0.99
TTC28-208ENST00000612946 LIPMQ5VYY2 423 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms