RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 NCKIPSDQ9NZQ3 722 aa17.66■□□□□ 0.42
CSNK1E-215ENST00000612795 VPS28Q9UK41 221 aa17.66■□□□□ 0.42
CSNK1E-215ENST00000612795 PCDHGA8Q9Y5G5 932 aa17.66■□□□□ 0.42
CSNK1E-215ENST00000612795 ENTPD2Q9Y5L3 495 aa17.66■□□□□ 0.42
CSNK1E-215ENST00000612795 A0A1W2PNU3 283 aaPredicted RBP17.65■□□□□ 0.42
CSNK1E-215ENST00000612795 KCNU1A8MYU2 1149 aa17.65■□□□□ 0.42
CSNK1E-215ENST00000612795 TRUB2O95900 331 aaKnown RBP17.65■□□□□ 0.42
CSNK1E-215ENST00000612795 CMA1P23946 247 aa17.65■□□□□ 0.42
CSNK1E-215ENST00000612795 CENPCQ03188 943 aa17.65■□□□□ 0.42
CSNK1E-215ENST00000612795 GUSBP11Q6P575 273 aa17.65■□□□□ 0.42
CSNK1E-215ENST00000612795 CRTC1Q6UUV9 634 aa17.65■□□□□ 0.42
CSNK1E-215ENST00000612795 Q6ZSR6 202 aa17.65■□□□□ 0.42
CSNK1E-215ENST00000612795 ABI3BPQ7Z7G0 1075 aa17.65■□□□□ 0.42
CSNK1E-215ENST00000612795 SMYD4Q8IYR2 804 aaPredicted RBP17.65■□□□□ 0.42
CSNK1E-215ENST00000612795 PPM1KQ8N3J5 372 aa17.65■□□□□ 0.42
CSNK1E-215ENST00000612795 SH2D3CQ8N5H7 860 aa17.65■□□□□ 0.42
CSNK1E-215ENST00000612795 FAM174AQ8TBP5 190 aa17.65■□□□□ 0.42
CSNK1E-215ENST00000612795 RPRD1AQ96P16 312 aaPredicted RBP17.65■□□□□ 0.42
CSNK1E-215ENST00000612795 NT5C1BQ96P26 610 aa17.65■□□□□ 0.42
CSNK1E-215ENST00000612795 FAM204AQ9H8W3 233 aa17.65■□□□□ 0.42
CSNK1E-215ENST00000612795 IL17BQ9UHF5 180 aa17.65■□□□□ 0.42
CSNK1E-215ENST00000612795 RCOR1Q9UKL0 485 aa17.65■□□□□ 0.42
CSNK1E-215ENST00000612795 HPSEQ9Y251 543 aa17.65■□□□□ 0.42
CSNK1E-215ENST00000612795 CDRT15L2A8MXV6 281 aa17.64■□□□□ 0.41
CSNK1E-215ENST00000612795 SLC16A3O15427 465 aaKnown RBP17.64■□□□□ 0.41
CSNK1E-215ENST00000612795 TNFSF15O95150 251 aa17.64■□□□□ 0.41
CSNK1E-215ENST00000612795 CALCAP01258 141 aa17.64■□□□□ 0.41
CSNK1E-215ENST00000612795 CLN3Q13286 438 aa17.64■□□□□ 0.41
CSNK1E-215ENST00000612795 SEL1L3Q68CR1 1132 aa17.64■□□□□ 0.41
CSNK1E-215ENST00000612795 BEND5Q7L4P6 421 aa17.64■□□□□ 0.41
CSNK1E-215ENST00000612795 PARGQ86W56 976 aa17.64■□□□□ 0.41
CSNK1E-215ENST00000612795 DCP2Q8IU60 420 aaKnown RBP17.64■□□□□ 0.41
CSNK1E-215ENST00000612795 TPCN2Q8NHX9 752 aa17.64■□□□□ 0.41
CSNK1E-215ENST00000612795 WDR36Q8NI36 951 aaKnown RBP17.64■□□□□ 0.41
CSNK1E-215ENST00000612795 CCNL2Q96S94 520 aaPredicted RBP17.64■□□□□ 0.41
CSNK1E-215ENST00000612795 TSG101Q99816 390 aa17.64■□□□□ 0.41
CSNK1E-215ENST00000612795 FEM1AQ9BSK4 669 aa17.64■□□□□ 0.41
CSNK1E-215ENST00000612795 SYNDIG1Q9H7V2 258 aa17.64■□□□□ 0.41
CSNK1E-215ENST00000612795 POPDC2Q9HBU9 364 aa17.64■□□□□ 0.41
CSNK1E-215ENST00000612795 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.64■□□□□ 0.413e-10■■□□□ 12.2
CSNK1E-215ENST00000612795 SYNJ2BP-COX16A0A087WUM0 186 aa17.63■□□□□ 0.41
CSNK1E-215ENST00000612795 RNF225M0QZC1 329 aaPredicted RBP17.63■□□□□ 0.41
CSNK1E-215ENST00000612795 RIOK3O14730 519 aaKnown RBP17.63■□□□□ 0.41
CSNK1E-215ENST00000612795 TCEA3O75764 348 aa17.63■□□□□ 0.41
CSNK1E-215ENST00000612795 CTSLP07711 333 aa17.63■□□□□ 0.41
CSNK1E-215ENST00000612795 NME1P15531 152 aaKnown RBP17.63■□□□□ 0.41
CSNK1E-215ENST00000612795 CHRNA3P32297 505 aa17.63■□□□□ 0.41
CSNK1E-215ENST00000612795 MLLT3P42568 568 aaPredicted RBP17.63■□□□□ 0.41
CSNK1E-215ENST00000612795 ACADSBP45954 432 aa17.63■□□□□ 0.41
CSNK1E-215ENST00000612795 KYAT3Q6YP21 454 aaKnown RBP17.63■□□□□ 0.41
CSNK1E-215ENST00000612795 PRR11Q96HE9 360 aaPredicted RBP17.63■□□□□ 0.41
CSNK1E-215ENST00000612795 PRMT1Q99873 361 aaKnown RBP17.63■□□□□ 0.41
CSNK1E-215ENST00000612795 ARHGAP9Q9BRR9 750 aa17.63■□□□□ 0.41
CSNK1E-215ENST00000612795 MUC3BQ9H195 1237 aa17.63■□□□□ 0.41
CSNK1E-215ENST00000612795 COX16Q9P0S2 106 aa17.63■□□□□ 0.41
CSNK1E-215ENST00000612795 IPO11Q9UI26 975 aaKnown RBP17.63■□□□□ 0.41
CSNK1E-215ENST00000612795 ZFR2Q9UPR6 939 aaKnown RBP17.63■□□□□ 0.41
CSNK1E-215ENST00000612795 DOPEY2Q9Y3R5 2298 aa17.63■□□□□ 0.41
CSNK1E-215ENST00000612795 PMS2P1A4D2B8 440 aa17.62■□□□□ 0.41
CSNK1E-215ENST00000612795 AQP9O43315 295 aa17.62■□□□□ 0.41
CSNK1E-215ENST00000612795 IGLV3-25P01717 112 aa17.62■□□□□ 0.41
CSNK1E-215ENST00000612795 CSF2P04141 144 aa17.62■□□□□ 0.41
CSNK1E-215ENST00000612795 PRNPP04156 253 aa17.62■□□□□ 0.41
CSNK1E-215ENST00000612795 SLC2A3P11169 496 aa17.62■□□□□ 0.41
CSNK1E-215ENST00000612795 SRCP12931 536 aa17.62■□□□□ 0.41
CSNK1E-215ENST00000612795 NDUFA8P51970 172 aa17.62■□□□□ 0.41
CSNK1E-215ENST00000612795 MAPK8IP2Q13387 824 aaPredicted RBP17.62■□□□□ 0.41
CSNK1E-215ENST00000612795 NR0B2Q15466 257 aa17.62■□□□□ 0.41
CSNK1E-215ENST00000612795 DEFB133Q30KQ1 61 aa17.62■□□□□ 0.41
CSNK1E-215ENST00000612795 FBXL22Q6P050 247 aa17.62■□□□□ 0.41
CSNK1E-215ENST00000612795 ERN2Q76MJ5 926 aaKnown RBP17.62■□□□□ 0.41
CSNK1E-215ENST00000612795 CLEC14AQ86T13 490 aa17.62■□□□□ 0.41
CSNK1E-215ENST00000612795 ATP11CQ8NB49 1132 aa17.62■□□□□ 0.41
CSNK1E-215ENST00000612795 OR52K2Q8NGK3 314 aa17.62■□□□□ 0.41
CSNK1E-215ENST00000612795 GRIN3AQ8TCU5 1115 aa17.62■□□□□ 0.41
CSNK1E-215ENST00000612795 SLC35C1Q96A29 364 aa17.62■□□□□ 0.41
CSNK1E-215ENST00000612795 ALG14Q96F25 216 aa17.62■□□□□ 0.41
CSNK1E-215ENST00000612795 PPP1R16AQ96I34 528 aa17.62■□□□□ 0.41
CSNK1E-215ENST00000612795 IL12RB2Q99665 862 aa17.62■□□□□ 0.41
CSNK1E-215ENST00000612795 ARMCX3Q9UH62 379 aaPredicted RBP17.62■□□□□ 0.41
CSNK1E-215ENST00000612795 VANGL2Q9ULK5 521 aa17.62■□□□□ 0.41
CSNK1E-215ENST00000612795 CSNK1G3Q9Y6M4 447 aa17.62■□□□□ 0.41
CSNK1E-215ENST00000612795 SCN8AQ9UQD0 1980 aa17.61■□□□□ 0.41
CSNK1E-215ENST00000612795 CCDC187A0A096LP49 1063 aa17.61■□□□□ 0.41
CSNK1E-215ENST00000612795 EME2A4GXA9 379 aaPredicted RBP17.61■□□□□ 0.41
CSNK1E-215ENST00000612795 MUSKO15146 869 aa17.61■□□□□ 0.41
CSNK1E-215ENST00000612795 HSP90AA1P07900 732 aaKnown RBP17.61■□□□□ 0.41
CSNK1E-215ENST00000612795 ITGA2BP08514 1039 aa17.61■□□□□ 0.41
CSNK1E-215ENST00000612795 CCR1P32246 355 aa17.61■□□□□ 0.41
CSNK1E-215ENST00000612795 YWHAZP63104 245 aaKnown RBP17.61■□□□□ 0.41
CSNK1E-215ENST00000612795 PITX1P78337 314 aaPredicted RBP17.61■□□□□ 0.41
CSNK1E-215ENST00000612795 KRT83P78385 493 aa17.61■□□□□ 0.41
CSNK1E-215ENST00000612795 FZD2Q14332 565 aa17.61■□□□□ 0.41
CSNK1E-215ENST00000612795 DRAP1Q14919 205 aaPredicted RBP17.61■□□□□ 0.41
CSNK1E-215ENST00000612795 ARL13BQ3SXY8 428 aa17.61■□□□□ 0.41
CSNK1E-215ENST00000612795 TMEM259Q4ZIN3 620 aa17.61■□□□□ 0.41
CSNK1E-215ENST00000612795 KRBA2Q6ZNG9 492 aa17.61■□□□□ 0.41
CSNK1E-215ENST00000612795 EXD3Q8N9H8 876 aa17.61■□□□□ 0.41
CSNK1E-215ENST00000612795 TMIEQ8NEW7 156 aa17.61■□□□□ 0.41
CSNK1E-215ENST00000612795 LMX1AQ8TE12 382 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms