RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 ICA1LQ8NDH6 482 aa16.28■□□□□ 0.2
RTN1-209ENST00000611068 HIPK4Q8NE63 616 aa16.28■□□□□ 0.2
RTN1-209ENST00000611068 ADAM32Q8TC27 787 aa16.28■□□□□ 0.2
RTN1-209ENST00000611068 PGBD4Q96DM1 585 aa16.28■□□□□ 0.2
RTN1-209ENST00000611068 ITPKCQ96DU7 683 aa16.28■□□□□ 0.2
RTN1-209ENST00000611068 DCLK3Q9C098 648 aa16.28■□□□□ 0.2
RTN1-209ENST00000611068 CEP44Q9C0F1 390 aa16.28■□□□□ 0.2
RTN1-209ENST00000611068 TMLHEQ9NVH6 421 aa16.28■□□□□ 0.2
RTN1-209ENST00000611068 RSL24D1Q9UHA3 163 aaKnown RBP16.28■□□□□ 0.2
RTN1-209ENST00000611068 DNPEPQ9ULA0 475 aa16.28■□□□□ 0.2
RTN1-209ENST00000611068 NR2E3Q9Y5X4 410 aa16.28■□□□□ 0.2
RTN1-209ENST00000611068 DNAJA2O60884 412 aa16.28■□□□□ 0.2
RTN1-209ENST00000611068 THRAP10827 490 aa16.28■□□□□ 0.2
RTN1-209ENST00000611068 MAN1A1P33908 653 aa16.28■□□□□ 0.2
RTN1-209ENST00000611068 ZNF143P52747 638 aaPredicted RBP16.28■□□□□ 0.2
RTN1-209ENST00000611068 SLC5A3P53794 718 aa16.28■□□□□ 0.2
RTN1-209ENST00000611068 NRLP54845 237 aa16.28■□□□□ 0.2
RTN1-209ENST00000611068 ARHGAP17Q68EM7 881 aa16.28■□□□□ 0.2
RTN1-209ENST00000611068 ITPRIPL1Q6GPH6 555 aa16.28■□□□□ 0.2
RTN1-209ENST00000611068 DHRS4L2Q6PKH6 230 aa16.28■□□□□ 0.2
RTN1-209ENST00000611068 GLB1LQ6UWU2 654 aa16.28■□□□□ 0.2
RTN1-209ENST00000611068 HFE2Q6ZVN8 426 aa16.28■□□□□ 0.2
RTN1-209ENST00000611068 GSTA5Q7RTV2 222 aa16.28■□□□□ 0.2
RTN1-209ENST00000611068 ZNF598Q86UK7 904 aaKnown RBP16.28■□□□□ 0.2
RTN1-209ENST00000611068 FAM126BQ8IXS8 530 aa16.28■□□□□ 0.2
RTN1-209ENST00000611068 RCOR2Q8IZ40 523 aa16.28■□□□□ 0.2
RTN1-209ENST00000611068 CNBD2Q96M20 576 aa16.28■□□□□ 0.2
RTN1-209ENST00000611068 RGS18Q9NS28 235 aa16.28■□□□□ 0.2
RTN1-209ENST00000611068 WHRNQ9P202 907 aa16.28■□□□□ 0.2
RTN1-209ENST00000611068 MEI4A8MW99 385 aa16.27■□□□□ 0.2
RTN1-209ENST00000611068 GABRDO14764 452 aa16.27■□□□□ 0.2
RTN1-209ENST00000611068 PABPC1P11940 636 aaKnown RBP16.27■□□□□ 0.2
RTN1-209ENST00000611068 SELPP16109 830 aa16.27■□□□□ 0.2
RTN1-209ENST00000611068 BDNFP23560 247 aa16.27■□□□□ 0.2
RTN1-209ENST00000611068 IVDP26440 423 aa16.27■□□□□ 0.2
RTN1-209ENST00000611068 MZF1P28698 734 aaPredicted RBP16.27■□□□□ 0.2
RTN1-209ENST00000611068 KLF1Q13351 362 aaPredicted RBP16.27■□□□□ 0.2
RTN1-209ENST00000611068 APOFQ13790 326 aa16.27■□□□□ 0.2
RTN1-209ENST00000611068 STILQ15468 1287 aa16.27■□□□□ 0.2
RTN1-209ENST00000611068 CA9Q16790 459 aa16.27■□□□□ 0.2
RTN1-209ENST00000611068 BORAQ6PGQ7 559 aa16.27■□□□□ 0.2
RTN1-209ENST00000611068 CLEC20AQ6ZU45 233 aa16.27■□□□□ 0.2
RTN1-209ENST00000611068 LIMS2Q7Z4I7 341 aa16.27■□□□□ 0.2
RTN1-209ENST00000611068 TMCO2Q7Z6W1 182 aaPredicted RBP16.27■□□□□ 0.2
RTN1-209ENST00000611068 LRRTM3Q86VH5 581 aa16.27■□□□□ 0.2
RTN1-209ENST00000611068 ZNF276Q8N554 614 aa16.27■□□□□ 0.2
RTN1-209ENST00000611068 SLC43A3Q8NBI5 491 aa16.27■□□□□ 0.2
RTN1-209ENST00000611068 OXNAD1Q96HP4 312 aaPredicted RBP16.27■□□□□ 0.2
RTN1-209ENST00000611068 MAELQ96JY0 434 aaKnown RBP16.27■□□□□ 0.2
RTN1-209ENST00000611068 RTP3Q9BQQ7 232 aa16.27■□□□□ 0.2
RTN1-209ENST00000611068 VPS51Q9UID3 782 aa16.27■□□□□ 0.2
RTN1-209ENST00000611068 TYROBPO43914 113 aa16.27■□□□□ 0.19
RTN1-209ENST00000611068 TRUB2O95900 331 aaKnown RBP16.27■□□□□ 0.19
RTN1-209ENST00000611068 HSPA8P11142 646 aaKnown RBP16.27■□□□□ 0.19
RTN1-209ENST00000611068 HSPA6P17066 643 aa16.27■□□□□ 0.19
RTN1-209ENST00000611068 CDH3P22223 829 aa16.27■□□□□ 0.19
RTN1-209ENST00000611068 CYP2C18P33260 490 aa16.27■□□□□ 0.19
RTN1-209ENST00000611068 CDKN2BP42772 138 aa16.27■□□□□ 0.19
RTN1-209ENST00000611068 TUSC3Q13454 348 aa16.27■□□□□ 0.19
RTN1-209ENST00000611068 STAT4Q14765 748 aa16.27■□□□□ 0.19
RTN1-209ENST00000611068 CYP1B1Q16678 543 aa16.27■□□□□ 0.19
RTN1-209ENST00000611068 HADHQ16836 314 aaKnown RBP16.27■□□□□ 0.19
RTN1-209ENST00000611068 PPP6R3Q5H9R7 873 aaPredicted RBP16.27■□□□□ 0.19
RTN1-209ENST00000611068 NPNTQ6UXI9 565 aa16.27■□□□□ 0.19
RTN1-209ENST00000611068 OR10T2Q8NGX3 314 aa16.27■□□□□ 0.19
RTN1-209ENST00000611068 MAK16Q9BXY0 300 aaKnown RBP16.27■□□□□ 0.19
RTN1-209ENST00000611068 DUSP16Q9BY84 665 aa16.27■□□□□ 0.19
RTN1-209ENST00000611068 ASNSD1Q9NWL6 643 aa16.27■□□□□ 0.19
RTN1-209ENST00000611068 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.27■□□□□ 0.19
RTN1-209ENST00000611068 RABL2AQ9UBK7 228 aaPredicted RBP16.27■□□□□ 0.19
RTN1-209ENST00000611068 EXOC1LA0A1B0GW35 172 aa16.26■□□□□ 0.19
RTN1-209ENST00000611068 C3orf70A6NLC5 250 aaPredicted RBP16.26■□□□□ 0.19
RTN1-209ENST00000611068 CST8O60676 142 aa16.26■□□□□ 0.19
RTN1-209ENST00000611068 MYL2P10916 166 aa16.26■□□□□ 0.19
RTN1-209ENST00000611068 SDC4P31431 198 aa16.26■□□□□ 0.19
RTN1-209ENST00000611068 CDH6P55285 790 aa16.26■□□□□ 0.19
RTN1-209ENST00000611068 PDAP1Q13442 181 aaKnown RBP16.26■□□□□ 0.19
RTN1-209ENST00000611068 SEPT7Q16181 437 aaKnown RBP16.26■□□□□ 0.19
RTN1-209ENST00000611068 ZNF280DQ6N043 979 aa16.26■□□□□ 0.19
RTN1-209ENST00000611068 GALNT4Q8N4A0 578 aa16.26■□□□□ 0.19
RTN1-209ENST00000611068 DDHD1Q8NEL9 900 aa16.26■□□□□ 0.19
RTN1-209ENST00000611068 PAIP1Q9H074 479 aaKnown RBP16.26■□□□□ 0.19
RTN1-209ENST00000611068 KIAA0100Q14667 2235 aaKnown RBP16.26■□□□□ 0.19
RTN1-209ENST00000611068 FAM47E-STBD1D6RA91 191 aa16.26■□□□□ 0.19
RTN1-209ENST00000611068 TMX2-CTNND1H3BSU7 103 aa16.26■□□□□ 0.19
RTN1-209ENST00000611068 USP17L7P0C7H9 530 aa16.26■□□□□ 0.19
RTN1-209ENST00000611068 NPR3P17342 541 aa16.26■□□□□ 0.19
RTN1-209ENST00000611068 TCEA1P23193 301 aaKnown RBP16.26■□□□□ 0.19
RTN1-209ENST00000611068 KDELR1P24390 212 aa16.26■□□□□ 0.19
RTN1-209ENST00000611068 CCT8P50990 548 aa16.26■□□□□ 0.19
RTN1-209ENST00000611068 TFDP3Q5H9I0 405 aa16.26■□□□□ 0.19
RTN1-209ENST00000611068 HP1BP3Q5SSJ5 553 aaPredicted RBP16.26■□□□□ 0.19
RTN1-209ENST00000611068 RFX6Q8HWS3 928 aa16.26■□□□□ 0.19
RTN1-209ENST00000611068 NIPA2Q8N8Q9 360 aa16.26■□□□□ 0.19
RTN1-209ENST00000611068 SMOQ99835 787 aa16.26■□□□□ 0.19
RTN1-209ENST00000611068 CCDC77Q9BR77 488 aa16.26■□□□□ 0.19
RTN1-209ENST00000611068 CNPY3Q9BT09 278 aa16.26■□□□□ 0.19
RTN1-209ENST00000611068 TMEM121Q9BTD3 319 aa16.26■□□□□ 0.19
RTN1-209ENST00000611068 SIAEQ9HAT2 523 aa16.26■□□□□ 0.19
RTN1-209ENST00000611068 MAN1C1Q9NR34 630 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms