RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 FICDQ9BVA6 458 aa13.86□□□□□ -0.19
NEK3-205ENST00000610828 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.86□□□□□ -0.191e-5■■■□□ 18
NEK3-205ENST00000610828 ELAC1Q9H777 363 aaKnown RBP13.86□□□□□ -0.19
NEK3-205ENST00000610828 IPO11Q9UI26 975 aaKnown RBP13.86□□□□□ -0.19
NEK3-205ENST00000610828 NYNRINQ9P2P1 1898 aaKnown RBP13.86□□□□□ -0.19
NEK3-205ENST00000610828 OR6C75A6NL08 312 aa13.86□□□□□ -0.19
NEK3-205ENST00000610828 A8MUI8 341 aa13.86□□□□□ -0.19
NEK3-205ENST00000610828 SNNO75324 88 aaPredicted RBP13.86□□□□□ -0.19
NEK3-205ENST00000610828 PMPCBO75439 489 aa13.86□□□□□ -0.19
NEK3-205ENST00000610828 DNAJB2P25686 324 aa13.86□□□□□ -0.19
NEK3-205ENST00000610828 SERPINB8P50452 374 aa13.86□□□□□ -0.19
NEK3-205ENST00000610828 RASSF2P50749 326 aa13.86□□□□□ -0.19
NEK3-205ENST00000610828 NRG1Q02297 640 aaPredicted RBP13.86□□□□□ -0.19
NEK3-205ENST00000610828 BFSP2Q13515 415 aa13.86□□□□□ -0.19
NEK3-205ENST00000610828 GPNMBQ14956 572 aa13.86□□□□□ -0.19
NEK3-205ENST00000610828 CTC1Q2NKJ3 1217 aa13.86□□□□□ -0.19
NEK3-205ENST00000610828 MS4A13Q5J8X5 152 aa13.86□□□□□ -0.19
NEK3-205ENST00000610828 AFMIDQ63HM1 303 aa13.86□□□□□ -0.19
NEK3-205ENST00000610828 SLAIN1Q8ND83 568 aa13.86□□□□□ -0.19
NEK3-205ENST00000610828 SKA1Q96BD8 255 aa13.86□□□□□ -0.19
NEK3-205ENST00000610828 RAB3IPQ96QF0 476 aaPredicted RBP13.86□□□□□ -0.19
NEK3-205ENST00000610828 KIFC1Q9BW19 673 aa13.86□□□□□ -0.19
NEK3-205ENST00000610828 FSD1LQ9BXM9 530 aa13.86□□□□□ -0.19
NEK3-205ENST00000610828 CFHR5Q9BXR6 569 aa13.86□□□□□ -0.19
NEK3-205ENST00000610828 CAB39LQ9H9S4 337 aa13.86□□□□□ -0.19
NEK3-205ENST00000610828 NOD2Q9HC29 1040 aa13.86□□□□□ -0.19
NEK3-205ENST00000610828 THAP1Q9NVV9 213 aa13.86□□□□□ -0.19
NEK3-205ENST00000610828 ZNF358Q9NW07 568 aa13.86□□□□□ -0.19
NEK3-205ENST00000610828 MARCH5Q9NX47 278 aa13.86□□□□□ -0.19
NEK3-205ENST00000610828 TMEM216Q9P0N5 145 aa13.86□□□□□ -0.19
NEK3-205ENST00000610828 PLXNA3P51805 1871 aa13.85□□□□□ -0.19
NEK3-205ENST00000610828 HMBSP08397 361 aa13.85□□□□□ -0.19
NEK3-205ENST00000610828 SLC11A1P49279 550 aa13.85□□□□□ -0.19
NEK3-205ENST00000610828 GEMP55040 296 aa13.85□□□□□ -0.19
NEK3-205ENST00000610828 TAF10Q12962 218 aa13.85□□□□□ -0.19
NEK3-205ENST00000610828 PCLAFQ15004 111 aa13.85□□□□□ -0.19
NEK3-205ENST00000610828 INSCQ1MX18 579 aa13.85□□□□□ -0.19
NEK3-205ENST00000610828 C10orf120Q5SQS8 335 aa13.85□□□□□ -0.19
NEK3-205ENST00000610828 MBLAC2Q68D91 279 aa13.85□□□□□ -0.19
NEK3-205ENST00000610828 FUT10Q6P4F1 479 aa13.85□□□□□ -0.19
NEK3-205ENST00000610828 KLHDC8BQ8IXV7 354 aa13.85□□□□□ -0.19
NEK3-205ENST00000610828 INPP5DQ92835 1189 aa13.85□□□□□ -0.19
NEK3-205ENST00000610828 SLC7A6OSQ96CW6 309 aaPredicted RBP13.85□□□□□ -0.19
NEK3-205ENST00000610828 PRR11Q96HE9 360 aaPredicted RBP13.85□□□□□ -0.19
NEK3-205ENST00000610828 CRISPLD1Q9H336 500 aa13.85□□□□□ -0.19
NEK3-205ENST00000610828 ATXN3LQ9H3M9 355 aa13.85□□□□□ -0.19
NEK3-205ENST00000610828 SAR1AQ9NR31 198 aa13.85□□□□□ -0.19
NEK3-205ENST00000610828 KCNK4Q9NYG8 393 aa13.85□□□□□ -0.19
NEK3-205ENST00000610828 PHF24Q9UPV7 400 aa13.85□□□□□ -0.19
NEK3-205ENST00000610828 MTMR11A4FU01 709 aa13.85□□□□□ -0.19
NEK3-205ENST00000610828 CHUKO15111 745 aa13.85□□□□□ -0.19
NEK3-205ENST00000610828 GNRH1P01148 92 aa13.85□□□□□ -0.19
NEK3-205ENST00000610828 PROCP04070 461 aa13.85□□□□□ -0.19
NEK3-205ENST00000610828 FGFR3P22607 806 aa13.85□□□□□ -0.19
NEK3-205ENST00000610828 DLG2Q15700 870 aa13.85□□□□□ -0.19
NEK3-205ENST00000610828 ANO4Q32M45 955 aa13.85□□□□□ -0.19
NEK3-205ENST00000610828 PCID2Q5JVF3 399 aa13.85□□□□□ -0.19
NEK3-205ENST00000610828 ICE2Q659A1 982 aa13.85□□□□□ -0.19
NEK3-205ENST00000610828 PDPK2PQ6A1A2 396 aa13.85□□□□□ -0.19
NEK3-205ENST00000610828 RSPO2Q6UXX9 243 aaPredicted RBP13.85□□□□□ -0.19
NEK3-205ENST00000610828 RNF19BQ6ZMZ0 732 aa13.85□□□□□ -0.19
NEK3-205ENST00000610828 TTC7BQ86TV6 843 aa13.85□□□□□ -0.19
NEK3-205ENST00000610828 ALYREFQ86V81 257 aaKnown RBP13.85□□□□□ -0.19
NEK3-205ENST00000610828 ZNF354CQ86Y25 554 aa13.85□□□□□ -0.19
NEK3-205ENST00000610828 LRRC49Q8IUZ0 686 aa13.85□□□□□ -0.19
NEK3-205ENST00000610828 C10orf107Q8IVU9 208 aa13.85□□□□□ -0.19
NEK3-205ENST00000610828 UTP4Q969X6 686 aaKnown RBP13.85□□□□□ -0.19
NEK3-205ENST00000610828 VPS39Q96JC1 886 aa13.85□□□□□ -0.19
NEK3-205ENST00000610828 ZYG11BQ9C0D3 744 aa13.85□□□□□ -0.19
NEK3-205ENST00000610828 NOL6Q9H6R4 1146 aaKnown RBP13.85□□□□□ -0.19
NEK3-205ENST00000610828 TLR8Q9NR97 1041 aaKnown RBP13.85□□□□□ -0.19
NEK3-205ENST00000610828 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.85□□□□□ -0.19
NEK3-205ENST00000610828 IL37Q9NZH6 218 aa13.85□□□□□ -0.19
NEK3-205ENST00000610828 TET1Q8NFU7 2136 aa13.84□□□□□ -0.19
NEK3-205ENST00000610828 WASH4PA8MWX3 477 aa13.84□□□□□ -0.19
NEK3-205ENST00000610828 TIMM44O43615 452 aa13.84□□□□□ -0.19
NEK3-205ENST00000610828 DNAJC6O75061 913 aa13.84□□□□□ -0.19
NEK3-205ENST00000610828 CNTN5O94779 1100 aa13.84□□□□□ -0.19
NEK3-205ENST00000610828 RTN3O95197 1032 aaPredicted RBP13.84□□□□□ -0.19
NEK3-205ENST00000610828 MYCP01106 439 aaPredicted RBP13.84□□□□□ -0.19
NEK3-205ENST00000610828 PRKCGP05129 697 aa13.84□□□□□ -0.19
NEK3-205ENST00000610828 FGF3P11487 239 aaPredicted RBP13.84□□□□□ -0.19
NEK3-205ENST00000610828 MAGEA12P43365 314 aa13.84□□□□□ -0.19
NEK3-205ENST00000610828 AQP5P55064 265 aa13.84□□□□□ -0.19
NEK3-205ENST00000610828 RIPK1Q13546 671 aa13.84□□□□□ -0.19
NEK3-205ENST00000610828 DBN1Q16643 649 aa13.84□□□□□ -0.19
NEK3-205ENST00000610828 ALFQ53S48 1182 aa13.84□□□□□ -0.19
NEK3-205ENST00000610828 RTP2Q5QGT7 225 aa13.84□□□□□ -0.19
NEK3-205ENST00000610828 PKN3Q6P5Z2 889 aa13.84□□□□□ -0.19
NEK3-205ENST00000610828 FAM126BQ8IXS8 530 aa13.84□□□□□ -0.19
NEK3-205ENST00000610828 PLD6Q8N2A8 252 aaKnown RBP13.84□□□□□ -0.19
NEK3-205ENST00000610828 ATP6V0D2Q8N8Y2 350 aa13.84□□□□□ -0.19
NEK3-205ENST00000610828 SEPT8Q92599 483 aa13.84□□□□□ -0.19
NEK3-205ENST00000610828 ISL2Q96A47 359 aa13.84□□□□□ -0.19
NEK3-205ENST00000610828 HMCESQ96FZ2 354 aa13.84□□□□□ -0.19
NEK3-205ENST00000610828 ENTPD7Q9NQZ7 604 aa13.84□□□□□ -0.19
NEK3-205ENST00000610828 CLIC5Q9NZA1 410 aa13.84□□□□□ -0.19
NEK3-205ENST00000610828 MARCH2Q9P0N8 246 aa13.84□□□□□ -0.19
NEK3-205ENST00000610828 COPG2Q9UBF2 871 aa13.84□□□□□ -0.19
NEK3-205ENST00000610828 HBS1LQ9Y450 684 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms