RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 FBXO32Q969P5 355 aa12.17□□□□□ -0.46
USP6NL-206ENST00000609853 THOC1Q96FV9 657 aaKnown RBP12.17□□□□□ -0.46
USP6NL-206ENST00000609853 PRKD2Q9BZL6 878 aa12.17□□□□□ -0.46
USP6NL-206ENST00000609853 KCNK13Q9HB14 408 aa12.17□□□□□ -0.46
USP6NL-206ENST00000609853 PRDM5Q9NQX1 630 aaPredicted RBP12.17□□□□□ -0.46
USP6NL-206ENST00000609853 VPS45Q9NRW7 570 aa12.17□□□□□ -0.46
USP6NL-206ENST00000609853 C20orf96Q9NUD7 363 aaPredicted RBP12.17□□□□□ -0.46
USP6NL-206ENST00000609853 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.17□□□□□ -0.46
USP6NL-206ENST00000609853 RBM22Q9NW64 420 aaKnown RBP eCLIP12.17□□□□□ -0.46
USP6NL-206ENST00000609853 GMIPQ9P107 970 aa12.17□□□□□ -0.46
USP6NL-206ENST00000609853 IPO11Q9UI26 975 aaKnown RBP12.17□□□□□ -0.46
USP6NL-206ENST00000609853 LNPEPQ9UIQ6 1025 aa12.17□□□□□ -0.46
USP6NL-206ENST00000609853 DCTN4Q9UJW0 460 aa12.17□□□□□ -0.46
USP6NL-206ENST00000609853 PSAT1Q9Y617 370 aa12.17□□□□□ -0.46
USP6NL-206ENST00000609853 NYNRINQ9P2P1 1898 aaKnown RBP12.16□□□□□ -0.46
USP6NL-206ENST00000609853 CHUKO15111 745 aa12.16□□□□□ -0.46
USP6NL-206ENST00000609853 ATP9BO43861 1147 aa12.16□□□□□ -0.46
USP6NL-206ENST00000609853 TBC1D4O60343 1298 aa12.16□□□□□ -0.46
USP6NL-206ENST00000609853 FKTNO75072 461 aa12.16□□□□□ -0.46
USP6NL-206ENST00000609853 MOCS2O96007 188 aaPredicted RBP12.16□□□□□ -0.46
USP6NL-206ENST00000609853 CPB1P15086 417 aa12.16□□□□□ -0.46
USP6NL-206ENST00000609853 PAMP19021 973 aa12.16□□□□□ -0.46
USP6NL-206ENST00000609853 SLC8A1P32418 973 aa12.16□□□□□ -0.46
USP6NL-206ENST00000609853 ADRA1AP35348 466 aa12.16□□□□□ -0.46
USP6NL-206ENST00000609853 PAPOLAP51003 745 aaKnown RBP12.16□□□□□ -0.46
USP6NL-206ENST00000609853 FASTKD1Q53R41 847 aaKnown RBP12.16□□□□□ -0.46
USP6NL-206ENST00000609853 N4BP2L1Q5TBK1 243 aaPredicted RBP12.16□□□□□ -0.46
USP6NL-206ENST00000609853 PIK3R6Q5UE93 754 aa12.16□□□□□ -0.46
USP6NL-206ENST00000609853 FUT10Q6P4F1 479 aa12.16□□□□□ -0.46
USP6NL-206ENST00000609853 OTOP3Q7RTS5 596 aa12.16□□□□□ -0.46
USP6NL-206ENST00000609853 MTDHQ86UE4 582 aaKnown RBP12.16□□□□□ -0.46
USP6NL-206ENST00000609853 CEP57Q86XR8 500 aa12.16□□□□□ -0.46
USP6NL-206ENST00000609853 ZNF683Q8IZ20 524 aa12.16□□□□□ -0.46
USP6NL-206ENST00000609853 PPHLN1Q8NEY8 458 aaKnown RBP12.16□□□□□ -0.46
USP6NL-206ENST00000609853 PPP1R14CQ8TAE6 165 aa12.16□□□□□ -0.46
USP6NL-206ENST00000609853 GABPB2Q8TAK5 448 aaPredicted RBP12.16□□□□□ -0.46
USP6NL-206ENST00000609853 SKA1Q96BD8 255 aa12.16□□□□□ -0.46
USP6NL-206ENST00000609853 MCMBPQ9BTE3 642 aa12.16□□□□□ -0.46
USP6NL-206ENST00000609853 TMEM120AQ9BXJ8 343 aa12.16□□□□□ -0.46
USP6NL-206ENST00000609853 GPR62Q9BZJ7 368 aa12.16□□□□□ -0.46
USP6NL-206ENST00000609853 WWP1Q9H0M0 922 aa12.16□□□□□ -0.46
USP6NL-206ENST00000609853 SLC25A51Q9H1U9 297 aa12.16□□□□□ -0.46
USP6NL-206ENST00000609853 STN1Q9H668 368 aaKnown RBP12.16□□□□□ -0.46
USP6NL-206ENST00000609853 CHRAC1Q9NRG0 131 aa12.16□□□□□ -0.46
USP6NL-206ENST00000609853 SNX15Q9NRS6 342 aa12.16□□□□□ -0.46
USP6NL-206ENST00000609853 MID2Q9UJV3 735 aa12.16□□□□□ -0.46
USP6NL-206ENST00000609853 RPL26L1Q9UNX3 145 aaKnown RBP12.16□□□□□ -0.46
USP6NL-206ENST00000609853 ANKRD6Q9Y2G4 727 aa12.16□□□□□ -0.46
USP6NL-206ENST00000609853 MTMR11A4FU01 709 aa12.15□□□□□ -0.46
USP6NL-206ENST00000609853 DRGXA6NNA5 263 aa12.15□□□□□ -0.46
USP6NL-206ENST00000609853 HAUS5O94927 633 aa12.15□□□□□ -0.46
USP6NL-206ENST00000609853 IGLV3-27P01718 113 aa12.15□□□□□ -0.46
USP6NL-206ENST00000609853 PROCP04070 461 aa12.15□□□□□ -0.46
USP6NL-206ENST00000609853 SERPINE1P05121 402 aa12.15□□□□□ -0.46
USP6NL-206ENST00000609853 APOA4P06727 396 aa12.15□□□□□ -0.46
USP6NL-206ENST00000609853 HAPLN1P10915 354 aaPredicted RBP12.15□□□□□ -0.46
USP6NL-206ENST00000609853 SLC11A1P49279 550 aa12.15□□□□□ -0.46
USP6NL-206ENST00000609853 ZBTB16Q05516 673 aa12.15□□□□□ -0.46
USP6NL-206ENST00000609853 ILF2Q12905 390 aaKnown RBP12.15□□□□□ -0.46
USP6NL-206ENST00000609853 TAF1BQ53T94 588 aaPredicted RBP12.15□□□□□ -0.46
USP6NL-206ENST00000609853 HSP90AA5PQ58FG0 334 aa12.15□□□□□ -0.46
USP6NL-206ENST00000609853 MS4A13Q5J8X5 152 aa12.15□□□□□ -0.46
USP6NL-206ENST00000609853 FSTL4Q6MZW2 842 aa12.15□□□□□ -0.46
USP6NL-206ENST00000609853 CES3Q6UWW8 571 aa12.15□□□□□ -0.46
USP6NL-206ENST00000609853 ARHGAP36Q6ZRI8 547 aa12.15□□□□□ -0.46
USP6NL-206ENST00000609853 C14orf80Q86SX3 495 aa12.15□□□□□ -0.46
USP6NL-206ENST00000609853 CNTN4Q8IWV2 1026 aa12.15□□□□□ -0.46
USP6NL-206ENST00000609853 CRIPAKQ8N1N5 446 aa12.15□□□□□ -0.46
USP6NL-206ENST00000609853 DCLK2Q8N568 766 aa12.15□□□□□ -0.46
USP6NL-206ENST00000609853 ATAD1Q8NBU5 361 aa12.15□□□□□ -0.46
USP6NL-206ENST00000609853 NSMCE1Q8WV22 266 aa12.15□□□□□ -0.46
USP6NL-206ENST00000609853 MFSD3Q96ES6 412 aa12.15□□□□□ -0.46
USP6NL-206ENST00000609853 FSD1LQ9BXM9 530 aa12.15□□□□□ -0.46
USP6NL-206ENST00000609853 ARNT2Q9HBZ2 717 aa12.15□□□□□ -0.46
USP6NL-206ENST00000609853 MARCH5Q9NX47 278 aa12.15□□□□□ -0.46
USP6NL-206ENST00000609853 MARCH2Q9P0N8 246 aa12.15□□□□□ -0.46
USP6NL-206ENST00000609853 HEY2Q9UBP5 337 aa12.15□□□□□ -0.46
USP6NL-206ENST00000609853 EMCNQ9ULC0 261 aa12.15□□□□□ -0.46
USP6NL-206ENST00000609853 CCDC22O60826 627 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 H2AFYO75367 372 aaKnown RBP12.14□□□□□ -0.47
USP6NL-206ENST00000609853 ATP6V1G2O95670 118 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 GSRP00390 522 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 ZDHHC11BP0C7U3 371 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 MYL2P10916 166 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 PTPN4P29074 926 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 YBEYP58557 167 aaPredicted RBP12.14□□□□□ -0.47
USP6NL-206ENST00000609853 USP46P62068 366 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 KCNJ2P63252 427 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 EFEMP1Q12805 493 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 OLIG2Q13516 323 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 GPNMBQ14956 572 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 TBCCQ15814 346 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 PARP15Q460N3 678 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 MBLAC2Q68D91 279 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 RANBP10Q6VN20 620 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 WDR75Q8IWA0 830 aaKnown RBP12.14□□□□□ -0.47
USP6NL-206ENST00000609853 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.14□□□□□ -0.47
USP6NL-206ENST00000609853 USP33Q8TEY7 942 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 PGLYRP2Q96PD5 576 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 TTPALQ9BTX7 342 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms