RNA–Protein interactions for RNA: ENST00000607520.1

SCARNA15-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 4,325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15-201ENST00000607520 SLC2A4P14672 509 aa5.26□□□□□ -1.57
SCARNA15-201ENST00000607520 AMD1P17707 334 aa5.26□□□□□ -1.57
SCARNA15-201ENST00000607520 MSH3P20585 1137 aa5.26□□□□□ -1.57
SCARNA15-201ENST00000607520 HIST1H2ADP20671 130 aa5.26□□□□□ -1.57
SCARNA15-201ENST00000607520 MMP8P22894 467 aa5.26□□□□□ -1.57
SCARNA15-201ENST00000607520 L1CAMP32004 1257 aa5.26□□□□□ -1.57
SCARNA15-201ENST00000607520 PTPN9P43378 593 aa5.26□□□□□ -1.57
SCARNA15-201ENST00000607520 MAPK9P45984 424 aa5.26□□□□□ -1.57
SCARNA15-201ENST00000607520 COPS2P61201 443 aa5.26□□□□□ -1.57
SCARNA15-201ENST00000607520 EIF2B5Q13144 721 aaKnown RBP5.26□□□□□ -1.57
SCARNA15-201ENST00000607520 ZNF211Q13398 564 aaPredicted RBP5.26□□□□□ -1.57
SCARNA15-201ENST00000607520 PDAP1Q13442 181 aaKnown RBP5.26□□□□□ -1.57
SCARNA15-201ENST00000607520 CUL1Q13616 776 aa5.26□□□□□ -1.57
SCARNA15-201ENST00000607520 PAPD7Q5XG87 772 aaKnown RBP5.26□□□□□ -1.57
SCARNA15-201ENST00000607520 FOXR1Q6PIV2 292 aa5.26□□□□□ -1.57
SCARNA15-201ENST00000607520 DOK6Q6PKX4 331 aa5.26□□□□□ -1.57
SCARNA15-201ENST00000607520 ALKAL1Q6UXT8 129 aa5.26□□□□□ -1.57
SCARNA15-201ENST00000607520 RAPH1Q70E73 1250 aa5.26□□□□□ -1.57
SCARNA15-201ENST00000607520 NT5DC3Q86UY8 548 aa5.26□□□□□ -1.57
SCARNA15-201ENST00000607520 SYNPOQ8N3V7 929 aa5.26□□□□□ -1.57
SCARNA15-201ENST00000607520 AFAP1L2Q8N4X5 818 aa5.26□□□□□ -1.57
SCARNA15-201ENST00000607520 FAM122AQ96E09 287 aa5.26□□□□□ -1.57
SCARNA15-201ENST00000607520 HIST1H2AHQ96KK5 128 aa5.26□□□□□ -1.57
SCARNA15-201ENST00000607520 RPL10LQ96L21 214 aaKnown RBP5.26□□□□□ -1.57
SCARNA15-201ENST00000607520 TWNKQ96RR1 684 aa5.26□□□□□ -1.57
SCARNA15-201ENST00000607520 HIST1H2AJQ99878 128 aa5.26□□□□□ -1.57
SCARNA15-201ENST00000607520 H2AFJQ9BTM1 129 aa5.26□□□□□ -1.57
SCARNA15-201ENST00000607520 FRMD8P1Q9BZ68 369 aaPredicted RBP5.26□□□□□ -1.57
SCARNA15-201ENST00000607520 XYLT2Q9H1B5 865 aa5.26□□□□□ -1.57
SCARNA15-201ENST00000607520 SMOC2Q9H3U7 446 aa5.26□□□□□ -1.57
SCARNA15-201ENST00000607520 NKIRAS1Q9NYS0 192 aa5.26□□□□□ -1.57
SCARNA15-201ENST00000607520 HACD3Q9P035 362 aa5.26□□□□□ -1.57
SCARNA15-201ENST00000607520 HMGXB4Q9UGU5 601 aa5.26□□□□□ -1.57
SCARNA15-201ENST00000607520 TRHDEQ9UKU6 1024 aa5.26□□□□□ -1.57
SCARNA15-201ENST00000607520 TPX2Q9ULW0 747 aaKnown RBP5.26□□□□□ -1.57
SCARNA15-201ENST00000607520 GRID2IPA4D2P6 1211 aa5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 HCRTO43612 131 aa5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 EDIL3O43854 480 aa5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 PYGLP06737 847 aa5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 ITGAVP06756 1048 aa5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 ERCC2P18074 760 aa5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 CSKP41240 450 aa5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 PRKCIP41743 596 aa5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 GPD2P43304 727 aa5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 NR2C2P49116 596 aa5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 DUSP3P51452 185 aaPredicted RBP5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 DHX9Q08211 1270 aaKnown RBP5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 TTLL9Q3SXZ7 439 aa5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 FASTKD1Q53R41 847 aaKnown RBP5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 TFDP3Q5H9I0 405 aa5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 WDR93Q6P2C0 686 aa5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 PARM1Q6UWI2 310 aa5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 RSPO2Q6UXX9 243 aaPredicted RBP5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 RAB44Q7Z6P3 723 aaPredicted RBP5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 SETD3Q86TU7 594 aaPredicted RBP5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 MYLK4Q86YV6 388 aaPredicted RBP5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 TMEM139Q8IV31 216 aa5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 PSTKQ8IV42 348 aaKnown RBP5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 SLC44A3Q8N4M1 653 aa5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 RPLP0P6Q8NHW5 317 aa5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 CALML6Q8TD86 181 aa5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 SCYL1Q96KG9 808 aa5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 HAPLN3Q96S86 360 aa5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 MLPHQ9BV36 600 aaPredicted RBP5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 SLC4A5Q9BY07 1137 aa5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 TPSD1Q9BZJ3 242 aa5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 RAB6BQ9NRW1 208 aa5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 CDV3Q9UKY7 258 aaKnown RBP5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 ATP8A1Q9Y2Q0 1164 aa5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 ESYT3A0FGR9 886 aa5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 ILVBLA1L0T0 632 aa5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 TGM2P21980 687 aa5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 MAT2AP31153 395 aaKnown RBP5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 SLC8A1P32418 973 aa5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 PCK1P35558 622 aa5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 FDFT1P37268 417 aa5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 NEK3P51956 506 aa5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 PTPN5P54829 565 aa5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 PLTPP55058 493 aa5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 ARL4CP56559 192 aa5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 SLC7A9P82251 487 aa5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 FMO1Q01740 532 aa5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 ILF3Q12906 894 aaKnown RBP eCLIP5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 PLEKHG6Q3KR16 790 aa5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 UBE2Q1Q7Z7E8 422 aa5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 TMEM110Q86TL2 294 aa5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 TTC9BQ8N6N2 239 aa5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 PCDH20Q8N6Y1 951 aaKnown RBP5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 TERB1Q8NA31 727 aa5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 CYB5D2Q8WUJ1 264 aa5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 ASB16Q96NS5 453 aa5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 FIZ1Q96SL8 496 aa5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 SNRNP25Q9BV90 132 aaKnown RBP5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 SPATA16Q9BXB7 569 aa5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 ARHGAP20Q9P2F6 1191 aa5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 INVSQ9Y283 1065 aa5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 RPP40O75818 363 aaKnown RBP5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 APRTP07741 180 aa5.25□□□□□ -1.57
SCARNA15-201ENST00000607520 ARSAP15289 507 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms