RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 DNALI1O14645 258 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 ACOX3O15254 700 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 SUV39H1O43463 412 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 CALUO43852 315 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 NOBOXO60393 691 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 ZBTB11O95625 1053 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 KRT6AP02538 564 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 APOEP02649 317 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 KRT6BP04259 564 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 ITGB3P05106 788 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 C6orf222P0C671 652 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 POLR2MP0CAP2 368 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 SRGAP2BP0DMP2 458 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 CYP2C8P10632 490 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 P4HA1P13674 534 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 ATF7P17544 494 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 CD247P20963 164 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 COMTP21964 271 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 KLRC2P26717 231 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 DCKP27707 260 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 ADSLP30566 484 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 HOXD13P35453 343 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 GNL1P36915 607 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 ADCY8P40145 1251 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 IL6STP40189 918 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 PIK3CAP42336 1068 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 PHKA1P46020 1223 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 STT3AP46977 705 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 KRT6CP48668 564 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 CEBPAP49715 358 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 EIF2B2P49770 351 aaKnown RBP4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 SEPHS1P49903 392 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 CCR3P51677 355 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 ESRRGP62508 458 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 HTRA3P83110 453 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 ARID5AQ03989 594 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 KRT17Q04695 432 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 COASYQ13057 564 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 DPYSQ14117 519 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 GRM4Q14833 912 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 SLC9A5Q14940 896 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 NR1D2Q14995 579 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 MORF4L2Q15014 288 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 ANKDD1AQ495B1 522 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 RARS2Q5T160 578 aaKnown RBP4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 BTBD8Q5XKL5 378 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 LPCAT4Q643R3 524 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 CPZQ66K79 652 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 ATG16L1Q676U5 607 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 CLEC4GQ6UXB4 293 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 SLC30A10Q6XR72 485 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 GADL1Q6ZQY3 521 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 RNF207Q6ZRF8 634 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 LPCAT2Q7L5N7 544 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 KRT27Q7Z3Y8 459 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 PCGF5Q86SE9 256 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 NEK8Q86SG6 692 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 CCDC25Q86WR0 208 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 DZIP1Q86YF9 867 aaKnown RBP4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 GRAMD2AQ8IUY3 354 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 CHERPQ8IWX8 916 aaKnown RBP4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 ESX1Q8N693 406 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 TRIML2Q8N7C3 387 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 ZNF713Q8N859 430 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 NGDNQ8NEJ9 315 aaKnown RBP4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 ETNPPLQ8TBG4 499 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 CALML6Q8TD86 181 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 SH3RF3Q8TEJ3 882 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 GIMAP1Q8WWP7 306 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 USP6NLQ92738 828 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 KRT35Q92764 455 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 ARHGEF26Q96DR7 871 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 TSPAN17Q96FV3 270 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 EEF2KMTQ96G04 330 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 ZNF597Q96LX8 424 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 C8orf49Q96NF6 230 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 FCRL3Q96P31 734 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 RBM15Q96T37 977 aaKnown RBP eCLIP4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 PRPF18Q99633 342 aaKnown RBP4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 AGPAT1Q99943 283 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 FERMT1Q9BQL6 677 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 SPON2Q9BUD6 331 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 C1orf50Q9BV19 199 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 OSBPL11Q9BXB4 747 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 NMUR2Q9GZQ4 415 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 EHD1Q9H4M9 534 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 SLC38A10Q9HBR0 1119 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 MAN1C1Q9NR34 630 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 OLAHQ9NV23 265 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 PSMC3IPQ9P2W1 217 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 COG5Q9UP83 839 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 APOBEC2Q9Y235 224 aaKnown RBP4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 POMPQ9Y244 141 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 RABGAP1Q9Y3P9 1069 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 TBX22Q9Y458 520 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 AP4B1Q9Y6B7 739 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 IKBKGQ9Y6K9 419 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 SCINQ9Y6U3 715 aa4.17□□□□□ -1.74
HMGB1P50-201ENST00000605814 ZNF335Q9H4Z2 1342 aaPredicted RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms