RNA–Protein interactions for RNA: ENST00000604367.1

CCDC12-211, Transcript of coiled-coil domain containing 12, humanhuman

Gene CCDC12, Length 2,412 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-211ENST00000604367 SLC39A5Q6ZMH5 540 aa15.34■□□□□ 0.05
CCDC12-211ENST00000604367 TIFABQ6ZNK6 161 aa15.34■□□□□ 0.05
CCDC12-211ENST00000604367 KCNMB4Q86W47 210 aa15.34■□□□□ 0.05
CCDC12-211ENST00000604367 RFWD2Q8NHY2 731 aa15.34■□□□□ 0.05
CCDC12-211ENST00000604367 C10orf82Q8WW14 230 aa15.34■□□□□ 0.05
CCDC12-211ENST00000604367 PABPC5Q96DU9 382 aaKnown RBP15.34■□□□□ 0.05
CCDC12-211ENST00000604367 SPATA17Q96L03 361 aa15.34■□□□□ 0.05
CCDC12-211ENST00000604367 RPRD1AQ96P16 312 aaPredicted RBP15.34■□□□□ 0.05
CCDC12-211ENST00000604367 CPNE1Q99829 537 aa15.34■□□□□ 0.05
CCDC12-211ENST00000604367 FSD1LQ9BXM9 530 aa15.34■□□□□ 0.05
CCDC12-211ENST00000604367 PRDM5Q9NQX1 630 aaPredicted RBP15.34■□□□□ 0.05
CCDC12-211ENST00000604367 OLA1Q9NTK5 396 aaKnown RBP15.34■□□□□ 0.05
CCDC12-211ENST00000604367 BPTFQ12830 3046 aa15.33■□□□□ 0.05
CCDC12-211ENST00000604367 GREB1Q4ZG55 1949 aa15.33■□□□□ 0.05
CCDC12-211ENST00000604367 MAGEB16A2A368 324 aa15.33■□□□□ 0.04
CCDC12-211ENST00000604367 CXCL10P02778 98 aa15.33■□□□□ 0.04
CCDC12-211ENST00000604367 RHOQP17081 205 aa15.33■□□□□ 0.04
CCDC12-211ENST00000604367 TYK2P29597 1187 aa15.33■□□□□ 0.04
CCDC12-211ENST00000604367 KCNQ1P51787 676 aa15.33■□□□□ 0.04
CCDC12-211ENST00000604367 GALNTL6Q49A17 601 aa15.33■□□□□ 0.04
CCDC12-211ENST00000604367 TEDDM1Q5T9Z0 273 aa15.33■□□□□ 0.04
CCDC12-211ENST00000604367 CMC1Q7Z7K0 106 aa15.33■□□□□ 0.04
CCDC12-211ENST00000604367 ERP27Q96DN0 273 aa15.33■□□□□ 0.04
CCDC12-211ENST00000604367 IARS2Q9NSE4 1012 aaKnown RBP15.33■□□□□ 0.04
CCDC12-211ENST00000604367 SOX13Q9UN79 622 aa15.33■□□□□ 0.04
CCDC12-211ENST00000604367 DOCK4Q8N1I0 1966 aa15.33■□□□□ 0.04
CCDC12-211ENST00000604367 A0A0G2JND7 137 aa15.33■□□□□ 0.04
CCDC12-211ENST00000604367 WASH4PA8MWX3 477 aa15.33■□□□□ 0.04
CCDC12-211ENST00000604367 TROVE2P10155 538 aaKnown RBP eCLIP15.33■□□□□ 0.04
CCDC12-211ENST00000604367 TMPRSS15P98073 1019 aa15.33■□□□□ 0.04
CCDC12-211ENST00000604367 ITKQ08881 620 aa15.33■□□□□ 0.04
CCDC12-211ENST00000604367 NAB1Q13506 487 aa15.33■□□□□ 0.04
CCDC12-211ENST00000604367 CHI3L2Q15782 390 aa15.33■□□□□ 0.04
CCDC12-211ENST00000604367 USP41Q3LFD5 358 aa15.33■□□□□ 0.04
CCDC12-211ENST00000604367 TTC31Q49AM3 519 aaPredicted RBP15.33■□□□□ 0.04
CCDC12-211ENST00000604367 NUDCD3Q8IVD9 361 aa15.33■□□□□ 0.04
CCDC12-211ENST00000604367 UMODL1-AS1Q8N2C9 162 aa15.33■□□□□ 0.04
CCDC12-211ENST00000604367 GBP7Q8N8V2 638 aaPredicted RBP15.33■□□□□ 0.04
CCDC12-211ENST00000604367 PSMG2Q969U7 264 aa15.33■□□□□ 0.04
CCDC12-211ENST00000604367 MYEOVQ96EZ4 313 aa15.33■□□□□ 0.04
CCDC12-211ENST00000604367 LRRC37BQ96QE4 947 aa15.33■□□□□ 0.04
CCDC12-211ENST00000604367 VN1R3Q9BXE9 311 aa15.33■□□□□ 0.04
CCDC12-211ENST00000604367 NACA2Q9H009 215 aa15.33■□□□□ 0.04
CCDC12-211ENST00000604367 MYLK2Q9H1R3 596 aa15.33■□□□□ 0.04
CCDC12-211ENST00000604367 MKS1Q9NXB0 559 aa15.33■□□□□ 0.04
CCDC12-211ENST00000604367 SAGE1Q9NXZ1 904 aa15.33■□□□□ 0.04
CCDC12-211ENST00000604367 CHKBQ9Y259 395 aa15.33■□□□□ 0.04
CCDC12-211ENST00000604367 PSMD3O43242 534 aa15.32■□□□□ 0.04
CCDC12-211ENST00000604367 GSTA1P08263 222 aa15.32■□□□□ 0.04
CCDC12-211ENST00000604367 ALDH3A1P30838 453 aa15.32■□□□□ 0.04
CCDC12-211ENST00000604367 SLC10A7Q0GE19 358 aa15.32■□□□□ 0.04
CCDC12-211ENST00000604367 SMARCB1Q12824 385 aa15.32■□□□□ 0.04
CCDC12-211ENST00000604367 SETDB1Q15047 1291 aa15.32■□□□□ 0.04
CCDC12-211ENST00000604367 ANO4Q32M45 955 aa15.32■□□□□ 0.04
CCDC12-211ENST00000604367 SPOUT1Q5T280 376 aaKnown RBP15.32■□□□□ 0.04
CCDC12-211ENST00000604367 GRTP1Q5TC63 336 aa15.32■□□□□ 0.04
CCDC12-211ENST00000604367 ANKRD33Q7Z3H0 272 aa15.32■□□□□ 0.04
CCDC12-211ENST00000604367 E2F7Q96AV8 911 aa15.32■□□□□ 0.04
CCDC12-211ENST00000604367 RBBP8Q99708 897 aa15.32■□□□□ 0.04
CCDC12-211ENST00000604367 ZNF395Q9H8N7 513 aaPredicted RBP15.32■□□□□ 0.04
CCDC12-211ENST00000604367 ECT2Q9H8V3 914 aa15.32■□□□□ 0.04
CCDC12-211ENST00000604367 SP110Q9HB58 689 aa15.32■□□□□ 0.04
CCDC12-211ENST00000604367 NT5MQ9NPB1 228 aa15.32■□□□□ 0.04
CCDC12-211ENST00000604367 TMEM248Q9NWD8 314 aa15.32■□□□□ 0.04
CCDC12-211ENST00000604367 TTC24A2A3L6 582 aaPredicted RBP15.32■□□□□ 0.04
CCDC12-211ENST00000604367 CHRNA4P43681 627 aa15.32■□□□□ 0.04
CCDC12-211ENST00000604367 NDST2P52849 883 aa15.32■□□□□ 0.04
CCDC12-211ENST00000604367 BNIP1Q12981 228 aa15.32■□□□□ 0.04
CCDC12-211ENST00000604367 N4BP2L1Q5TBK1 243 aaPredicted RBP15.32■□□□□ 0.04
CCDC12-211ENST00000604367 FSTL4Q6MZW2 842 aa15.32■□□□□ 0.04
CCDC12-211ENST00000604367 ZCCHC23Q6ZST2 131 aa15.32■□□□□ 0.04
CCDC12-211ENST00000604367 CFAP52Q8N1V2 620 aa15.32■□□□□ 0.04
CCDC12-211ENST00000604367 DCLK2Q8N568 766 aa15.32■□□□□ 0.04
CCDC12-211ENST00000604367 ATP2A3Q93084 1043 aa15.32■□□□□ 0.04
CCDC12-211ENST00000604367 ZNF512Q96ME7 567 aaPredicted RBP15.32■□□□□ 0.04
CCDC12-211ENST00000604367 TRIM55Q9BYV6 548 aa15.32■□□□□ 0.04
CCDC12-211ENST00000604367 SLC40A1Q9NP59 571 aa15.32■□□□□ 0.04
CCDC12-211ENST00000604367 DNAJC8O75937 253 aaPredicted RBP15.31■□□□□ 0.04
CCDC12-211ENST00000604367 PEX11BO96011 259 aa15.31■□□□□ 0.04
CCDC12-211ENST00000604367 GEMP55040 296 aa15.31■□□□□ 0.04
CCDC12-211ENST00000604367 BST1Q10588 318 aa15.31■□□□□ 0.04
CCDC12-211ENST00000604367 IKBKEQ14164 716 aa15.31■□□□□ 0.04
CCDC12-211ENST00000604367 CES4AQ5XG92 561 aa15.31■□□□□ 0.04
CCDC12-211ENST00000604367 NADSYN1Q6IA69 706 aa15.31■□□□□ 0.04
CCDC12-211ENST00000604367 DENND5AQ6IQ26 1287 aa15.31■□□□□ 0.04
CCDC12-211ENST00000604367 SLC8B1Q6J4K2 584 aa15.31■□□□□ 0.04
CCDC12-211ENST00000604367 NLRP9Q7RTR0 991 aa15.31■□□□□ 0.04
CCDC12-211ENST00000604367 C2orf15Q8WU43 125 aaKnown RBP15.31■□□□□ 0.04
CCDC12-211ENST00000604367 MRGPRX2Q96LB1 330 aa15.31■□□□□ 0.04
CCDC12-211ENST00000604367 CAB39LQ9H9S4 337 aa15.31■□□□□ 0.04
CCDC12-211ENST00000604367 SNX15Q9NRS6 342 aa15.31■□□□□ 0.04
CCDC12-211ENST00000604367 PPARGC1AQ9UBK2 798 aaKnown RBP15.31■□□□□ 0.04
CCDC12-211ENST00000604367 MTRRQ9UBK8 725 aa15.31■□□□□ 0.04
CCDC12-211ENST00000604367 ATP11BQ9Y2G3 1177 aa15.31■□□□□ 0.04
CCDC12-211ENST00000604367 TANC1Q9C0D5 1861 aa15.31■□□□□ 0.04
CCDC12-211ENST00000604367 IGLV3-10A0A075B6K4 115 aa15.31■□□□□ 0.04
CCDC12-211ENST00000604367 AP3B1O00203 1094 aa15.31■□□□□ 0.04
CCDC12-211ENST00000604367 IGLV3-27P01718 113 aa15.31■□□□□ 0.04
CCDC12-211ENST00000604367 OR1E1P30953 314 aa15.31■□□□□ 0.04
CCDC12-211ENST00000604367 SPRP35270 261 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms