RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 ACP6Q9NPH0 428 aa18.27■□□□□ 0.52
SHKBP1-227ENST00000602011 EVA1BQ9NVM1 165 aa18.27■□□□□ 0.52
SHKBP1-227ENST00000602011 ARHGEF38Q9NXL2 777 aa18.27■□□□□ 0.52
SHKBP1-227ENST00000602011 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.27■□□□□ 0.52
SHKBP1-227ENST00000602011 COX16Q9P0S2 106 aa18.27■□□□□ 0.52
SHKBP1-227ENST00000602011 AK5Q9Y6K8 562 aa18.27■□□□□ 0.52
SHKBP1-227ENST00000602011 DRGXA6NNA5 263 aa18.26■□□□□ 0.51
SHKBP1-227ENST00000602011 TK2O00142 265 aa18.26■□□□□ 0.51
SHKBP1-227ENST00000602011 CHRNA3P32297 505 aa18.26■□□□□ 0.51
SHKBP1-227ENST00000602011 RECQLP46063 649 aaPredicted RBP18.26■□□□□ 0.51
SHKBP1-227ENST00000602011 HES3Q5TGS1 186 aa18.26■□□□□ 0.51
SHKBP1-227ENST00000602011 FAM183BPQ6ZVS7 135 aa18.26■□□□□ 0.51
SHKBP1-227ENST00000602011 FAM114A1Q8IWE2 563 aa18.26■□□□□ 0.51
SHKBP1-227ENST00000602011 PPP1R16AQ96I34 528 aa18.26■□□□□ 0.51
SHKBP1-227ENST00000602011 NPY6RQ99463 290 aa18.26■□□□□ 0.51
SHKBP1-227ENST00000602011 HDAC8Q9BY41 377 aa18.26■□□□□ 0.51
SHKBP1-227ENST00000602011 TKTL2Q9H0I9 626 aa18.26■□□□□ 0.51
SHKBP1-227ENST00000602011 SIK2Q9H0K1 926 aa18.26■□□□□ 0.51
SHKBP1-227ENST00000602011 SHROOM3Q8TF72 1996 aa18.25■□□□□ 0.51
SHKBP1-227ENST00000602011 NEMP2A6NFY4 417 aa18.25■□□□□ 0.51
SHKBP1-227ENST00000602011 TLX3O43711 291 aaPredicted RBP18.25■□□□□ 0.51
SHKBP1-227ENST00000602011 GRAP2O75791 330 aa18.25■□□□□ 0.51
SHKBP1-227ENST00000602011 RHOCP08134 193 aa18.25■□□□□ 0.51
SHKBP1-227ENST00000602011 ALPPL2P10696 532 aa18.25■□□□□ 0.51
SHKBP1-227ENST00000602011 SRCP12931 536 aa18.25■□□□□ 0.51
SHKBP1-227ENST00000602011 MAT2AP31153 395 aaKnown RBP18.25■□□□□ 0.51
SHKBP1-227ENST00000602011 AKT2P31751 481 aa18.25■□□□□ 0.51
SHKBP1-227ENST00000602011 EIF2S3P41091 472 aaKnown RBP18.25■□□□□ 0.51
SHKBP1-227ENST00000602011 NUMBP49757 651 aa18.25■□□□□ 0.51
SHKBP1-227ENST00000602011 SEMG2Q02383 582 aa18.25■□□□□ 0.51
SHKBP1-227ENST00000602011 PROX2Q3B8N5 592 aa18.25■□□□□ 0.51
SHKBP1-227ENST00000602011 RETSATQ6NUM9 610 aa18.25■□□□□ 0.51
SHKBP1-227ENST00000602011 GJB7Q6PEY0 223 aa18.25■□□□□ 0.51
SHKBP1-227ENST00000602011 Q6ZVU0 165 aa18.25■□□□□ 0.51
SHKBP1-227ENST00000602011 HORMAD1Q86X24 394 aa18.25■□□□□ 0.51
SHKBP1-227ENST00000602011 DCAF4L2Q8NA75 395 aa18.25■□□□□ 0.51
SHKBP1-227ENST00000602011 TMEM145Q8NBT3 493 aa18.25■□□□□ 0.51
SHKBP1-227ENST00000602011 MSANTD4Q8NCY6 345 aa18.25■□□□□ 0.51
SHKBP1-227ENST00000602011 UBL7Q96S82 380 aaPredicted RBP18.25■□□□□ 0.51
SHKBP1-227ENST00000602011 PDCL3Q9H2J4 239 aa18.25■□□□□ 0.51
SHKBP1-227ENST00000602011 USP29Q9HBJ7 922 aa18.25■□□□□ 0.51
SHKBP1-227ENST00000602011 DNAJC12Q9UKB3 198 aa18.25■□□□□ 0.51
SHKBP1-227ENST00000602011 CLCA2Q9UQC9 943 aa18.25■□□□□ 0.51
SHKBP1-227ENST00000602011 RAI2Q9Y5P3 530 aa18.25■□□□□ 0.51
SHKBP1-227ENST00000602011 HS3ST3A1Q9Y663 406 aa18.25■□□□□ 0.51
SHKBP1-227ENST00000602011 ILVBLA1L0T0 632 aa18.24■□□□□ 0.51
SHKBP1-227ENST00000602011 THEGLP0DJG4 465 aa18.24■□□□□ 0.51
SHKBP1-227ENST00000602011 HNRNPA2B1P22626 353 aaKnown RBP18.24■□□□□ 0.51
SHKBP1-227ENST00000602011 CDH5P33151 784 aaPredicted RBP18.24■□□□□ 0.51
SHKBP1-227ENST00000602011 ACTN2P35609 894 aa18.24■□□□□ 0.51
SHKBP1-227ENST00000602011 MTIF2P46199 727 aaKnown RBP18.24■□□□□ 0.51
SHKBP1-227ENST00000602011 GABRB2P47870 512 aa18.24■□□□□ 0.51
SHKBP1-227ENST00000602011 CENPCQ03188 943 aa18.24■□□□□ 0.51
SHKBP1-227ENST00000602011 KCNMA1Q12791 1236 aa18.24■□□□□ 0.51
SHKBP1-227ENST00000602011 TPD52L1Q16890 204 aaPredicted RBP18.24■□□□□ 0.51
SHKBP1-227ENST00000602011 SLC25A52Q3SY17 297 aa18.24■□□□□ 0.51
SHKBP1-227ENST00000602011 PIP5KL1Q5T9C9 394 aa18.24■□□□□ 0.51
SHKBP1-227ENST00000602011 ARCQ7LC44 396 aa18.24■□□□□ 0.51
SHKBP1-227ENST00000602011 PASD1Q8IV76 773 aa18.24■□□□□ 0.51
SHKBP1-227ENST00000602011 FAM71AQ8IYT1 594 aa18.24■□□□□ 0.51
SHKBP1-227ENST00000602011 DCBLD1Q8N8Z6 715 aa18.24■□□□□ 0.51
SHKBP1-227ENST00000602011 OR2A12Q8NGT7 310 aa18.24■□□□□ 0.51
SHKBP1-227ENST00000602011 FGF11Q92914 225 aa18.24■□□□□ 0.51
SHKBP1-227ENST00000602011 C18orf8Q96DM3 657 aa18.24■□□□□ 0.51
SHKBP1-227ENST00000602011 HAPLN3Q96S86 360 aa18.24■□□□□ 0.51
SHKBP1-227ENST00000602011 CEP44Q9C0F1 390 aa18.24■□□□□ 0.51
SHKBP1-227ENST00000602011 FLNBO75369 2602 aaKnown RBP18.23■□□□□ 0.51
SHKBP1-227ENST00000602011 IGLV3-10A0A075B6K4 115 aa18.23■□□□□ 0.51
SHKBP1-227ENST00000602011 A0A1W2PQU0 124 aa18.23■□□□□ 0.51
SHKBP1-227ENST00000602011 FOXN3O00409 490 aaPredicted RBP18.23■□□□□ 0.51
SHKBP1-227ENST00000602011 KPNA3O00505 521 aaPredicted RBP18.23■□□□□ 0.51
SHKBP1-227ENST00000602011 C1QL1O75973 258 aa18.23■□□□□ 0.51
SHKBP1-227ENST00000602011 ERBB2P04626 1255 aa18.23■□□□□ 0.51
SHKBP1-227ENST00000602011 GLDCP23378 1020 aa18.23■□□□□ 0.51
SHKBP1-227ENST00000602011 CLCN1P35523 988 aa18.23■□□□□ 0.51
SHKBP1-227ENST00000602011 DUSP3P51452 185 aaPredicted RBP18.23■□□□□ 0.51
SHKBP1-227ENST00000602011 TAS2R38P59533 333 aa18.23■□□□□ 0.51
SHKBP1-227ENST00000602011 DEUP1Q05D60 604 aa18.23■□□□□ 0.51
SHKBP1-227ENST00000602011 MAN2A1Q16706 1144 aa18.23■□□□□ 0.51
SHKBP1-227ENST00000602011 PTPN20Q4JDL3 420 aa18.23■□□□□ 0.51
SHKBP1-227ENST00000602011 ERN2Q76MJ5 926 aaKnown RBP18.23■□□□□ 0.51
SHKBP1-227ENST00000602011 C14orf80Q86SX3 495 aa18.23■□□□□ 0.51
SHKBP1-227ENST00000602011 PLPP6Q8IY26 295 aa18.23■□□□□ 0.51
SHKBP1-227ENST00000602011 LSMEM2Q8N112 164 aa18.23■□□□□ 0.51
SHKBP1-227ENST00000602011 OR52K2Q8NGK3 314 aa18.23■□□□□ 0.51
SHKBP1-227ENST00000602011 OR4C6Q8NH72 309 aa18.23■□□□□ 0.51
SHKBP1-227ENST00000602011 SNIP1Q8TAD8 396 aaKnown RBP18.23■□□□□ 0.51
SHKBP1-227ENST00000602011 FEM1CQ96JP0 617 aa18.23■□□□□ 0.51
SHKBP1-227ENST00000602011 DUSP23Q9BVJ7 150 aa18.23■□□□□ 0.51
SHKBP1-227ENST00000602011 PIGVQ9NUD9 493 aa18.23■□□□□ 0.51
SHKBP1-227ENST00000602011 NCKIPSDQ9NZQ3 722 aa18.23■□□□□ 0.51
SHKBP1-227ENST00000602011 VPS51Q9UID3 782 aa18.23■□□□□ 0.51
SHKBP1-227ENST00000602011 ARID1BQ8NFD5 2236 aaPredicted RBP18.22■□□□□ 0.51
SHKBP1-227ENST00000602011 SLC31A1O15431 190 aa18.22■□□□□ 0.51
SHKBP1-227ENST00000602011 BNIP3LO60238 219 aa18.22■□□□□ 0.51
SHKBP1-227ENST00000602011 ADCY5O95622 1261 aa18.22■□□□□ 0.51
SHKBP1-227ENST00000602011 GP1BAP07359 652 aa18.22■□□□□ 0.51
SHKBP1-227ENST00000602011 DGKAP23743 735 aa18.22■□□□□ 0.51
SHKBP1-227ENST00000602011 OR1E1P30953 314 aa18.22■□□□□ 0.51
SHKBP1-227ENST00000602011 ETFBP38117 255 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms