RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 IL1BP01584 269 aa17.58■□□□□ 0.4
HERC3-214ENST00000601319 GOT1P17174 413 aa17.58■□□□□ 0.4
HERC3-214ENST00000601319 PSMA2P25787 234 aa17.58■□□□□ 0.4
HERC3-214ENST00000601319 HNRNPH3P31942 346 aaKnown RBP17.58■□□□□ 0.4
HERC3-214ENST00000601319 SLC20A2Q08357 652 aa17.58■□□□□ 0.4
HERC3-214ENST00000601319 ACCSLQ4AC99 568 aa17.58■□□□□ 0.4
HERC3-214ENST00000601319 FAM46CQ5VWP2 391 aa17.58■□□□□ 0.4
HERC3-214ENST00000601319 DAB2IPQ5VWQ8 1189 aa17.58■□□□□ 0.4
HERC3-214ENST00000601319 SCYL2Q6P3W7 929 aa17.58■□□□□ 0.4
HERC3-214ENST00000601319 C22orf39Q6P5X5 142 aa17.58■□□□□ 0.4
HERC3-214ENST00000601319 RTL3Q8N8U3 475 aaKnown RBP17.58■□□□□ 0.4
HERC3-214ENST00000601319 ATP11CQ8NB49 1132 aa17.58■□□□□ 0.4
HERC3-214ENST00000601319 EPAS1Q99814 870 aa17.58■□□□□ 0.4
HERC3-214ENST00000601319 OMDQ99983 421 aa17.58■□□□□ 0.4
HERC3-214ENST00000601319 ZDHHC5Q9C0B5 715 aa17.58■□□□□ 0.4
HERC3-214ENST00000601319 MAGEH1Q9H213 219 aa17.58■□□□□ 0.4
HERC3-214ENST00000601319 MRPL47Q9HD33 250 aaKnown RBP17.58■□□□□ 0.4
HERC3-214ENST00000601319 PPM1HQ9ULR3 514 aa17.58■□□□□ 0.4
HERC3-214ENST00000601319 TPX2Q9ULW0 747 aaKnown RBP17.58■□□□□ 0.4
HERC3-214ENST00000601319 SPTBN2O15020 2390 aa17.58■□□□□ 0.4
HERC3-214ENST00000601319 DCDC2BA2VCK2 349 aa17.57■□□□□ 0.4
HERC3-214ENST00000601319 C1QTNF3-AMACRE9PGA6 284 aa17.57■□□□□ 0.4
HERC3-214ENST00000601319 CBX4O00257 560 aa17.57■□□□□ 0.4
HERC3-214ENST00000601319 ARHGAP33O14559 1287 aa17.57■□□□□ 0.4
HERC3-214ENST00000601319 FGF10O15520 208 aaPredicted RBP17.57■□□□□ 0.4
HERC3-214ENST00000601319 SYPP08247 313 aa17.57■□□□□ 0.4
HERC3-214ENST00000601319 GLDCP23378 1020 aa17.57■□□□□ 0.4
HERC3-214ENST00000601319 DRD3P35462 400 aa17.57■□□□□ 0.4
HERC3-214ENST00000601319 GEMIN4P57678 1058 aaKnown RBP17.57■□□□□ 0.4
HERC3-214ENST00000601319 ARF5P84085 180 aa17.57■□□□□ 0.4
HERC3-214ENST00000601319 NFKBIBQ15653 356 aa17.57■□□□□ 0.4
HERC3-214ENST00000601319 SPECC1LQ69YQ0 1117 aa17.57■□□□□ 0.4
HERC3-214ENST00000601319 PYROXD2Q8N2H3 581 aa17.57■□□□□ 0.4
HERC3-214ENST00000601319 ZCCHC9Q8N567 271 aaKnown RBP17.57■□□□□ 0.4
HERC3-214ENST00000601319 OR2A12Q8NGT7 310 aa17.57■□□□□ 0.4
HERC3-214ENST00000601319 OR2T34Q8NGX1 318 aa17.57■□□□□ 0.4
HERC3-214ENST00000601319 GANCQ8TET4 914 aa17.57■□□□□ 0.4
HERC3-214ENST00000601319 ARHGEF2Q92974 986 aaKnown RBP17.57■□□□□ 0.4
HERC3-214ENST00000601319 BIRC7Q96CA5 298 aa17.57■□□□□ 0.4
HERC3-214ENST00000601319 NCAPGQ9BPX3 1015 aa17.57■□□□□ 0.4
HERC3-214ENST00000601319 MAGEB5Q9BZ81 275 aa17.57■□□□□ 0.4
HERC3-214ENST00000601319 NDFIP2Q9NV92 336 aa17.57■□□□□ 0.4
HERC3-214ENST00000601319 EIF2B4Q9UI10 523 aaKnown RBP17.57■□□□□ 0.4
HERC3-214ENST00000601319 LRRC72A6NJI9 287 aa17.56■□□□□ 0.4
HERC3-214ENST00000601319 WASH4PA8MWX3 477 aa17.56■□□□□ 0.4
HERC3-214ENST00000601319 K7ERQ8 282 aa17.56■□□□□ 0.4
HERC3-214ENST00000601319 BCAT2O15382 392 aaPredicted RBP17.56■□□□□ 0.4
HERC3-214ENST00000601319 SMAD6O43541 496 aaKnown RBP17.56■□□□□ 0.4
HERC3-214ENST00000601319 RAMP2O60895 175 aa17.56■□□□□ 0.4
HERC3-214ENST00000601319 RNF8O76064 485 aa17.56■□□□□ 0.4
HERC3-214ENST00000601319 IGHV4-34P06331 123 aa17.56■□□□□ 0.4
HERC3-214ENST00000601319 CD27P26842 260 aa17.56■□□□□ 0.4
HERC3-214ENST00000601319 MAOBP27338 520 aa17.56■□□□□ 0.4
HERC3-214ENST00000601319 EPHB2P29323 1055 aa17.56■□□□□ 0.4
HERC3-214ENST00000601319 CASP14P31944 242 aa17.56■□□□□ 0.4
HERC3-214ENST00000601319 GALCP54803 685 aa17.56■□□□□ 0.4
HERC3-214ENST00000601319 ADPRHP54922 357 aa17.56■□□□□ 0.4
HERC3-214ENST00000601319 ACAP1Q15027 740 aa17.56■□□□□ 0.4
HERC3-214ENST00000601319 KIAA0895LQ68EN5 471 aa17.56■□□□□ 0.4
HERC3-214ENST00000601319 LINGO4Q6UY18 593 aa17.56■□□□□ 0.4
HERC3-214ENST00000601319 DNAAF5Q86Y56 855 aa17.56■□□□□ 0.4
HERC3-214ENST00000601319 PSTKQ8IV42 348 aaKnown RBP17.56■□□□□ 0.4
HERC3-214ENST00000601319 HDDC3Q8N4P3 179 aa17.56■□□□□ 0.4
HERC3-214ENST00000601319 PCDH20Q8N6Y1 951 aaKnown RBP17.56■□□□□ 0.4
HERC3-214ENST00000601319 CPLX3Q8WVH0 158 aa17.56■□□□□ 0.4
HERC3-214ENST00000601319 SPON2Q9BUD6 331 aa17.56■□□□□ 0.4
HERC3-214ENST00000601319 TRIM7Q9C029 511 aa17.56■□□□□ 0.4
HERC3-214ENST00000601319 NEUROG2Q9H2A3 272 aa17.56■□□□□ 0.4
HERC3-214ENST00000601319 KDM4CQ9H3R0 1056 aa17.56■□□□□ 0.4
HERC3-214ENST00000601319 CATSPERBQ9H7T0 1116 aa17.56■□□□□ 0.4
HERC3-214ENST00000601319 DNAI1Q9UI46 699 aa17.56■□□□□ 0.4
HERC3-214ENST00000601319 SARDHQ9UL12 918 aa17.56■□□□□ 0.4
HERC3-214ENST00000601319 NENFQ9UMX5 172 aa17.56■□□□□ 0.4
HERC3-214ENST00000601319 FARP1Q9Y4F1 1045 aaPredicted RBP17.56■□□□□ 0.4
HERC3-214ENST00000601319 A0A087X0T9 212 aa17.55■□□□□ 0.4
HERC3-214ENST00000601319 ZSCAN5CA6NGD5 496 aaPredicted RBP17.55■□□□□ 0.4
HERC3-214ENST00000601319 LRCH4O75427 683 aa17.55■□□□□ 0.4
HERC3-214ENST00000601319 ZNF821O75541 412 aaPredicted RBP17.55■□□□□ 0.4
HERC3-214ENST00000601319 FAM228BP0C875 321 aa17.55■□□□□ 0.4
HERC3-214ENST00000601319 ACVRL1P37023 503 aa17.55■□□□□ 0.4
HERC3-214ENST00000601319 MAPK8P45983 427 aa17.55■□□□□ 0.4
HERC3-214ENST00000601319 CCR5P51681 352 aa17.55■□□□□ 0.4
HERC3-214ENST00000601319 AFF3P51826 1226 aaKnown RBP17.55■□□□□ 0.4
HERC3-214ENST00000601319 ATXN3P54252 364 aaPredicted RBP17.55■□□□□ 0.4
HERC3-214ENST00000601319 YBEYP58557 167 aaPredicted RBP17.55■□□□□ 0.4
HERC3-214ENST00000601319 GRIK2Q13002 908 aa17.55■□□□□ 0.4
HERC3-214ENST00000601319 PPM1JQ5JR12 505 aa17.55■□□□□ 0.4
HERC3-214ENST00000601319 CYP4V2Q6ZWL3 525 aaPredicted RBP17.55■□□□□ 0.4
HERC3-214ENST00000601319 PLPP6Q8IY26 295 aa17.55■□□□□ 0.4
HERC3-214ENST00000601319 ARFGAP1Q8N6T3 406 aa17.55■□□□□ 0.4
HERC3-214ENST00000601319 TMIEQ8NEW7 156 aa17.55■□□□□ 0.4
HERC3-214ENST00000601319 PIP4K2CQ8TBX8 421 aa17.55■□□□□ 0.4
HERC3-214ENST00000601319 SNX19Q92543 992 aa17.55■□□□□ 0.4
HERC3-214ENST00000601319 ISG20Q96AZ6 181 aaKnown RBP17.55■□□□□ 0.4
HERC3-214ENST00000601319 DNAJC7Q99615 494 aa17.55■□□□□ 0.4
HERC3-214ENST00000601319 ORAI3Q9BRQ5 295 aa17.55■□□□□ 0.4
HERC3-214ENST00000601319 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.55■□□□□ 0.4
HERC3-214ENST00000601319 MIR1-1HGQ9H1L0 117 aa17.55■□□□□ 0.4
HERC3-214ENST00000601319 NOL6Q9H6R4 1146 aaKnown RBP17.55■□□□□ 0.4
HERC3-214ENST00000601319 DNAAF2Q9NVR5 837 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms