RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 DMXL2Q8TDJ6 3036 aa17.4■□□□□ 0.38
SCAF1-204ENST00000601038 DOCK9Q9BZ29 2069 aa17.4■□□□□ 0.38
SCAF1-204ENST00000601038 A0A0D9SEW6 157 aa17.4■□□□□ 0.38
SCAF1-204ENST00000601038 FAM149AA5PLN7 773 aa17.4■□□□□ 0.38
SCAF1-204ENST00000601038 PRAMEF26H0Y7S4 382 aa17.4■□□□□ 0.38
SCAF1-204ENST00000601038 K7ERQ8 282 aa17.4■□□□□ 0.38
SCAF1-204ENST00000601038 PES1O00541 588 aaKnown RBP17.4■□□□□ 0.38
SCAF1-204ENST00000601038 CTSLP07711 333 aa17.4■□□□□ 0.38
SCAF1-204ENST00000601038 OR1E1P30953 314 aa17.4■□□□□ 0.38
SCAF1-204ENST00000601038 CHRNA3P32297 505 aa17.4■□□□□ 0.38
SCAF1-204ENST00000601038 FLT3P36888 993 aa17.4■□□□□ 0.38
SCAF1-204ENST00000601038 CLCN6P51797 869 aa17.4■□□□□ 0.38
SCAF1-204ENST00000601038 TAS2R38P59533 333 aa17.4■□□□□ 0.38
SCAF1-204ENST00000601038 BNIP3Q12983 259 aa17.4■□□□□ 0.38
SCAF1-204ENST00000601038 C6orf118Q5T5N4 469 aa17.4■□□□□ 0.38
SCAF1-204ENST00000601038 PIP5KL1Q5T9C9 394 aa17.4■□□□□ 0.38
SCAF1-204ENST00000601038 NEK5Q6P3R8 708 aa17.4■□□□□ 0.38
SCAF1-204ENST00000601038 ARCQ7LC44 396 aa17.4■□□□□ 0.38
SCAF1-204ENST00000601038 BNIPLQ7Z465 357 aa17.4■□□□□ 0.38
SCAF1-204ENST00000601038 NOP9Q86U38 636 aaKnown RBP17.4■□□□□ 0.38
SCAF1-204ENST00000601038 EID2Q8N6I1 236 aa17.4■□□□□ 0.38
SCAF1-204ENST00000601038 PDCD7Q8N8D1 485 aaKnown RBP17.4■□□□□ 0.38
SCAF1-204ENST00000601038 MSANTD4Q8NCY6 345 aa17.4■□□□□ 0.38
SCAF1-204ENST00000601038 HAPLN3Q96S86 360 aa17.4■□□□□ 0.38
SCAF1-204ENST00000601038 STK33Q9BYT3 514 aa17.4■□□□□ 0.38
SCAF1-204ENST00000601038 TMPRSS4Q9NRS4 437 aa17.4■□□□□ 0.38
SCAF1-204ENST00000601038 SAMSN1Q9NSI8 373 aaKnown RBP17.4■□□□□ 0.38
SCAF1-204ENST00000601038 MPP6Q9NZW5 540 aa17.4■□□□□ 0.38
SCAF1-204ENST00000601038 TMEM59LQ9UK28 342 aa17.4■□□□□ 0.38
SCAF1-204ENST00000601038 CACNA1GO43497 2377 aa17.4■□□□□ 0.38
SCAF1-204ENST00000601038 ACACAQ13085 2346 aa17.39■□□□□ 0.38
SCAF1-204ENST00000601038 E9PAM4 449 aa17.39■□□□□ 0.37
SCAF1-204ENST00000601038 CBX4O00257 560 aa17.39■□□□□ 0.37
SCAF1-204ENST00000601038 SMAD6O43541 496 aaKnown RBP17.39■□□□□ 0.37
SCAF1-204ENST00000601038 RNGTTO60942 597 aaKnown RBP17.39■□□□□ 0.37
SCAF1-204ENST00000601038 PRNPP04156 253 aa17.39■□□□□ 0.37
SCAF1-204ENST00000601038 RRM1P23921 792 aa17.39■□□□□ 0.37
SCAF1-204ENST00000601038 EEF1GP26641 437 aaKnown RBP17.39■□□□□ 0.37
SCAF1-204ENST00000601038 CYP4F3Q08477 520 aa17.39■□□□□ 0.37
SCAF1-204ENST00000601038 TCP11X2Q5H9J9 407 aa17.39■□□□□ 0.37
SCAF1-204ENST00000601038 ARTNQ5T4W7 220 aa17.39■□□□□ 0.37
SCAF1-204ENST00000601038 SFMBT2Q5VUG0 894 aa17.39■□□□□ 0.37
SCAF1-204ENST00000601038 TRNP1Q6NT89 227 aa17.39■□□□□ 0.37
SCAF1-204ENST00000601038 ZNF783Q6ZMS7 281 aa17.39■□□□□ 0.37
SCAF1-204ENST00000601038 KANSL1Q7Z3B3 1105 aa17.39■□□□□ 0.37
SCAF1-204ENST00000601038 TFAP2DQ7Z6R9 452 aa17.39■□□□□ 0.37
SCAF1-204ENST00000601038 CPA5Q8WXQ8 436 aa17.39■□□□□ 0.37
SCAF1-204ENST00000601038 TSC1Q92574 1164 aa17.39■□□□□ 0.37
SCAF1-204ENST00000601038 NUP62CLQ9H1M0 184 aa17.39■□□□□ 0.37
SCAF1-204ENST00000601038 ILVBLA1L0T0 632 aa17.38■□□□□ 0.37
SCAF1-204ENST00000601038 F8VZ95 297 aa17.38■□□□□ 0.37
SCAF1-204ENST00000601038 GOLGA8SH3BPF8 625 aa17.38■□□□□ 0.37
SCAF1-204ENST00000601038 KPNA3O00505 521 aaPredicted RBP17.38■□□□□ 0.37
SCAF1-204ENST00000601038 SRGAP2O75044 1071 aa17.38■□□□□ 0.37
SCAF1-204ENST00000601038 RFPL3O75679 317 aa17.38■□□□□ 0.37
SCAF1-204ENST00000601038 MMEP08473 750 aa17.38■□□□□ 0.37
SCAF1-204ENST00000601038 NOMO3P69849 1222 aa17.38■□□□□ 0.37
SCAF1-204ENST00000601038 DNAJC3Q13217 504 aa17.38■□□□□ 0.37
SCAF1-204ENST00000601038 C2CD6Q53TS8 623 aa17.38■□□□□ 0.37
SCAF1-204ENST00000601038 C19orf48Q6RUI8 117 aa17.38■□□□□ 0.37
SCAF1-204ENST00000601038 LINGO4Q6UY18 593 aa17.38■□□□□ 0.37
SCAF1-204ENST00000601038 TMEM145Q8NBT3 493 aa17.38■□□□□ 0.37
SCAF1-204ENST00000601038 EPS8L1Q8TE68 723 aa17.38■□□□□ 0.37
SCAF1-204ENST00000601038 ARRDC3Q96B67 414 aa17.38■□□□□ 0.37
SCAF1-204ENST00000601038 KLHDC7BQ96G42 594 aa17.38■□□□□ 0.37
SCAF1-204ENST00000601038 CFAP57Q96MR6 1250 aa17.38■□□□□ 0.37
SCAF1-204ENST00000601038 DYRK4Q9NR20 520 aa17.38■□□□□ 0.37
SCAF1-204ENST00000601038 ZNF212Q9UDV6 495 aa17.38■□□□□ 0.37
SCAF1-204ENST00000601038 RAXQ9Y2V3 346 aa17.38■□□□□ 0.37
SCAF1-204ENST00000601038 ADAMTS20P59510 1910 aa17.38■□□□□ 0.37
SCAF1-204ENST00000601038 URB1O60287 2271 aaKnown RBP17.38■□□□□ 0.37
SCAF1-204ENST00000601038 ARID1BQ8NFD5 2236 aaPredicted RBP17.37■□□□□ 0.37
SCAF1-204ENST00000601038 DOCK4Q8N1I0 1966 aa17.37■□□□□ 0.37
SCAF1-204ENST00000601038 A0A1W2PQU0 124 aa17.37■□□□□ 0.37
SCAF1-204ENST00000601038 FAM170AA1A519 330 aa17.37■□□□□ 0.37
SCAF1-204ENST00000601038 ENDOD1O94919 500 aa17.37■□□□□ 0.37
SCAF1-204ENST00000601038 RECQLP46063 649 aaPredicted RBP17.37■□□□□ 0.37
SCAF1-204ENST00000601038 ACADVLP49748 655 aa17.37■□□□□ 0.37
SCAF1-204ENST00000601038 SLC20A2Q08357 652 aa17.37■□□□□ 0.37
SCAF1-204ENST00000601038 NAA35Q5VZE5 725 aa17.37■□□□□ 0.37
SCAF1-204ENST00000601038 RETSATQ6NUM9 610 aa17.37■□□□□ 0.37
SCAF1-204ENST00000601038 C22orf39Q6P5X5 142 aa17.37■□□□□ 0.37
SCAF1-204ENST00000601038 ZNF677Q86XU0 584 aa17.37■□□□□ 0.37
SCAF1-204ENST00000601038 CHST14Q8NCH0 376 aa17.37■□□□□ 0.37
SCAF1-204ENST00000601038 OR7D4Q8NG98 312 aa17.37■□□□□ 0.37
SCAF1-204ENST00000601038 HDAC8Q9BY41 377 aa17.37■□□□□ 0.37
SCAF1-204ENST00000601038 ZYG11BQ9C0D3 744 aa17.37■□□□□ 0.37
SCAF1-204ENST00000601038 PPARGC1AQ9UBK2 798 aaKnown RBP17.37■□□□□ 0.37
SCAF1-204ENST00000601038 IL36AQ9UHA7 158 aa17.37■□□□□ 0.37
SCAF1-204ENST00000601038 CA5BQ9Y2D0 317 aa17.37■□□□□ 0.37
SCAF1-204ENST00000601038 WDFY3Q8IZQ1 3526 aa17.37■□□□□ 0.37
SCAF1-204ENST00000601038 APC2O95996 2303 aa17.37■□□□□ 0.37
SCAF1-204ENST00000601038 SLC31A1O15431 190 aa17.36■□□□□ 0.37
SCAF1-204ENST00000601038 ZNF821O75541 412 aaPredicted RBP17.36■□□□□ 0.37
SCAF1-204ENST00000601038 ZMPSTE24O75844 475 aa17.36■□□□□ 0.37
SCAF1-204ENST00000601038 JUPP14923 745 aa17.36■□□□□ 0.37
SCAF1-204ENST00000601038 GLDCP23378 1020 aa17.36■□□□□ 0.37
SCAF1-204ENST00000601038 HNF1BP35680 557 aa17.36■□□□□ 0.37
SCAF1-204ENST00000601038 ILKQ13418 452 aa17.36■□□□□ 0.37
SCAF1-204ENST00000601038 ZNF284Q2VY69 593 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms